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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY67675 Canola cytosol 11.3 89.15
CDY72653 Canola cytosol 20.53 84.27
CDY35293 Canola cytosol 64.73 81.66
CDY35292 Canola plasma membrane 88.21 80.11
CDX94698 Canola plasma membrane 30.35 78.43
CDY35283 Canola cytosol, plasma membrane, plastid 48.92 77.93
CDY43183 Canola mitochondrion, plasma membrane 66.31 76.7
CDX94703 Canola plasma membrane 64.54 75.87
AT1G29720.1 Thale cress plasma membrane 75.15 75.07
CDX99848 Canola plasma membrane 74.66 74.58
CDX99849 Canola plasma membrane 73.67 74.33
CDX94701 Canola cytosol 52.06 74.23
CDY43181 Canola cytosol 46.07 74.21
CDX73324 Canola nucleus 2.26 74.19
CDY28419 Canola mitochondrion, plasma membrane 60.9 73.99
CDY26317 Canola plasma membrane 73.08 73.45
CDY13695 Canola plasma membrane 73.67 73.39
CDY26319 Canola plasma membrane 73.08 73.23
CDY49080 Canola cytosol 34.97 73.1
CDY44292 Canola plasma membrane 70.83 72.98
CDX67411 Canola plasma membrane 50.49 72.39
CDX94692 Canola plasma membrane 68.47 70.12
CDX73325 Canola plasma membrane 62.38 63.88
CDY67674 Canola cytosol 44.99 62.14
CDX77648 Canola cytosol 26.33 61.61
CDY43187 Canola plasma membrane 57.86 58.78
CDX98148 Canola plasma membrane 58.55 58.6
CDX98146 Canola plasma membrane 57.17 58.2
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 25.25 54.56
CDY43185 Canola plasma membrane 56.29 53.4
CDX90205 Canola plasma membrane 89.19 51.74
VIT_10s0003g01990.t01 Wine grape plasma membrane 46.27 51.31
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 28.78 50.0
CDX93632 Canola plasma membrane 45.78 46.05
CDX95138 Canola plasma membrane 45.68 45.95
CDX75790 Canola peroxisome 42.04 45.58
CDX97605 Canola plasma membrane 40.77 45.26
CDX90208 Canola plasma membrane 44.99 45.17
CDY35279 Canola plasma membrane 44.99 45.17
CDX81476 Canola cytosol 12.48 44.72
CDX98497 Canola cytosol, plasma membrane, plastid 42.44 44.54
CDX75791 Canola plasma membrane 44.2 44.34
CDX82464 Canola plasma membrane 42.34 44.25
CDY20088 Canola plasma membrane 44.2 44.16
CDY26316 Canola plasma membrane 44.11 44.15
CDX99850 Canola plasma membrane 44.11 44.15
CDX82465 Canola plasma membrane 44.01 44.14
CDX98501 Canola plasma membrane 44.2 44.12
CDX75792 Canola plasma membrane 42.14 44.05
CDX97606 Canola plasma membrane 43.81 43.73
CDX82466 Canola plasma membrane 43.81 43.73
CDY32338 Canola plasma membrane 44.01 43.54
CDY25853 Canola plasma membrane 44.2 43.1
CDY60204 Canola plasma membrane 44.11 43.01
CDX97610 Canola plasma membrane 42.83 38.55
CDX67736 Canola plasma membrane 36.54 37.05
CDY59119 Canola plasma membrane 36.54 37.05
CDX98288 Canola plasma membrane 36.44 36.95
CDY42407 Canola plasma membrane 37.33 36.79
CDY10509 Canola plasma membrane 37.03 36.71
CDY10508 Canola plasma membrane 36.94 36.4
CDY47811 Canola plasma membrane 35.95 36.06
CDY22357 Canola plasma membrane 35.85 35.96
CDY46490 Canola plasma membrane 35.76 35.83
CDY68250 Canola plasma membrane 35.56 35.63
CDY25239 Canola plasma membrane 32.12 35.39
CDY12693 Canola plasma membrane 32.61 33.1
CDY38804 Canola golgi, plasma membrane 19.06 30.36
CDY11604 Canola plasma membrane 18.76 29.89
CDY03757 Canola plasma membrane 36.54 18.21
CDY43003 Canola plasma membrane 36.64 17.78
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078HCU3
UniProt:A0A078HCU3EnsemblPlants:CDY35284ProteinID:CDY35284ProteinID:CDY35284.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00058229001InterPro:IPR000719InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:MalectinPFAM:PF00069PFAM:PF11721ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EF49E1SEG:seg::::
Description
BnaC03g59390DBnaC03g59390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCU3]
Coordinates
chrLK032349:+:210931..216535
Molecular Weight (calculated)
112574.0 Da
IEP (calculated)
7.534
GRAVY (calculated)
-0.152
Length
1018 amino acids
Sequence
(BLAST)
0001: MGVVFSALVL FFTIITSFSS TLTTSASPAL HPDELKALGE IATTLGIKRL NLSDGDPCLL KTLKLGVVSN PDSDVENIIL CDCSFNNNMT CHIIELILKS
0101: VSLSGKLPPE LAKLQHLQKI NLCRNYLSGS IPMEWASMPN LTSISFCANR LSGPLPPGLQ NFKSLKFLGV EANQFSGPIP DELGNMINLT GLELASNQFT
0201: GSLPSSLARL VNLEKFRISE NNFSGTIPEY IGNWSRLTRL DLQASGLKGP FPDAVARLEN LTNLFISDMT GINSFPNISS QAIKDLVLRN VSMSGKIPSY
0301: IWSKPNLRSL DLSFNKLTGE VLGINPVPKF TYLTGNMLSG EIKSGVYLNS RSNIDLSYNN FSLPFSCQER SNINTYRSSS LKNTLTGLLP CAGPITCKHY
0401: KRSLHINCGG ETVTVTNSIG KITYQADNSD QVKAATNQHF KNWGISNTGD FMDDNRDEDT YIISTSLTLP GDSPDLYKTA RRSALSLVYY AFCLENGEYN
0501: LKLHFMEIQF SDQELYSRLG RRIFDVYVQG KLFLRDFNIR QEANGTLKSI VKELKAVNVT DHKLEIWLYW AGKGTTLIPK RGNYGPLISA ISLCHSLEQH
0601: CGVEKTKHHI NYPLIFGVTG PSVAIIFLAL GFYAHRKFRQ DKKKRERDLR ARGLQTVCFT WRQLQAATND FDEANKLGEG GFGSVFKGEL PDGTIIAVKQ
0701: LSSKSCQGNR EFVNEIGMIS GLNHPNLVKL YGCCVEKDQL LLVYEYMENN SLALVLSGKS SMKLDWKARQ KICVGIARGL EFLHEGSMIT MVHRDIKTPN
0801: VLLDADLNAK ISDFGLARLH EEEHTHISTK VAGTMGYMAP EYVLWGQLTE KADVYSFGVV AMEIVSGKSN TKHKGTADHI SLLDWALSLH QKGNILEVVD
0901: PVLEGHFNRK EAVRMINVAL VCTNSSPALR PTMSEAVKML EGVIELTQVS SDPGIYGDDW SLLKLRDIDD THGSSSTSGV TDQTRTTTKS SVSGCDLYPL
1001: YPESMTLNST VEYHSSSL
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.