CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 2
plasma membrane 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73324	Canola	nucleus	3.7	100.0
Bra034418.1-P	Field mustard	cytosol, plasma membrane, plastid	60.14	99.8
CDY72653	Canola	cytosol	25.66	86.69
CDX94698	Canola	plasma membrane	36.63	77.92
CDY35283	Canola	cytosol, plasma membrane, plastid	58.59	76.84
CDY43181	Canola	cytosol	57.64	76.42
CDY49080	Canola	cytosol	44.03	75.77
CDX73325	Canola	plasma membrane	87.47	73.74
CDX94701	Canola	cytosol	61.93	72.69
CDY35293	Canola	cytosol	69.57	72.24
CDY43183	Canola	mitochondrion, plasma membrane	72.67	69.2
CDX94703	Canola	plasma membrane	71.0	68.71
CDX67411	Canola	plasma membrane	58.11	68.59
CDY44292	Canola	plasma membrane	72.43	61.44
CDY26319	Canola	plasma membrane	73.99	61.02
CDY35284	Canola	plasma membrane	73.99	60.9
CDX99848	Canola	plasma membrane	73.99	60.84
CDY13695	Canola	plasma membrane	73.75	60.47
CDX77648	Canola	cytosol	31.15	60.0
AT1G29720.1	Thale cress	plasma membrane	72.91	59.96
CDX99849	Canola	plasma membrane	71.12	59.07
CDX94692	Canola	plasma membrane	69.33	58.45
CDY26317	Canola	plasma membrane	70.64	58.44
CDY67674	Canola	cytosol	48.33	54.95
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	30.67	54.56
CDY35292	Canola	plasma membrane	69.33	51.83
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	33.77	48.29
CDY67675	Canola	cytosol	7.28	47.29
CDY43187	Canola	plasma membrane	53.94	45.11
CDX98146	Canola	plasma membrane	53.82	45.1
CDX98148	Canola	plasma membrane	54.42	44.84
VIT_10s0003g01990.t01	Wine grape	plasma membrane	47.97	43.79
CDX81476	Canola	cytosol	14.8	43.66
CDX97605	Canola	plasma membrane	46.06	42.09
CDY43185	Canola	plasma membrane	52.27	40.82
CDX75790	Canola	peroxisome	44.87	40.04
CDX93632	Canola	plasma membrane	47.26	39.13
CDX98497	Canola	cytosol, plasma membrane, plastid	45.23	39.07
CDX95138	Canola	plasma membrane	47.02	38.93
CDX90208	Canola	plasma membrane	46.06	38.07
CDY35279	Canola	plasma membrane	46.06	38.07
CDX98501	Canola	plasma membrane	46.3	38.04
CDY20088	Canola	plasma membrane	45.82	37.68
CDX97606	Canola	plasma membrane	45.82	37.65
CDX82464	Canola	plasma membrane	43.56	37.47
CDX75792	Canola	plasma membrane	43.32	37.27
CDX75791	Canola	plasma membrane	44.99	37.14
CDX82466	Canola	plasma membrane	45.11	37.06
CDY26316	Canola	plasma membrane	44.87	36.97
CDX99850	Canola	plasma membrane	44.87	36.97
CDX82465	Canola	plasma membrane	44.75	36.95
CDY32338	Canola	plasma membrane	45.23	36.83
CDY25853	Canola	plasma membrane	44.99	36.11
CDY60204	Canola	plasma membrane	44.63	35.82
CDX90205	Canola	plasma membrane	73.15	34.93
CDX97610	Canola	plasma membrane	45.47	33.69
CDY42407	Canola	plasma membrane	39.74	32.24
CDX67736	Canola	plasma membrane	38.19	31.87
CDY10508	Canola	plasma membrane	39.26	31.85
CDX98288	Canola	plasma membrane	38.07	31.77
CDY25239	Canola	plasma membrane	34.96	31.71
CDY22357	Canola	plasma membrane	38.31	31.63
CDY59119	Canola	plasma membrane	37.83	31.57
CDY10509	Canola	plasma membrane	38.66	31.55
CDY46490	Canola	plasma membrane	38.19	31.5
CDY47811	Canola	plasma membrane	38.07	31.43
CDY68250	Canola	plasma membrane	37.83	31.2
CDY12693	Canola	plasma membrane	34.61	28.91
CDY38804	Canola	golgi, plasma membrane	17.66	23.16
CDY11604	Canola	plasma membrane	17.3	22.69
CDY03757	Canola	plasma membrane	38.9	15.96
CDY43003	Canola	plasma membrane	39.14	15.63

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078GTA0
UniProt:A0A078GTA0	EnsemblPlants:CDY28419	ProteinID:CDY28419	ProteinID:CDY28419.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00040269001	InterPro:IPR000719	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Malectin	PFAM:PF07714	PFAM:PF11721	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF54	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI0004EE127D	SEG:seg	:	:	:	:

Description

BnaA05g18210DBnaA05g18210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTA0]

Coordinates

chrLK032219:-:488839..496366

Molecular Weight (calculated)

91836.2 Da

IEP (calculated)

6.656

GRAVY (calculated)

-0.108

Length

838 amino acids

Sequence
(BLAST)

001: MTSMIHKLLG CFVPLRSRHL GVILFRGIEA NQFSGPIPDE LGSMTNLTKL HLASNQFNGS LPITLARLVN LKDLVSDNNF SGTIPAYIGN WFGVQRLHIH
101: ASGLKGPIPE AVARLKNLNE LRISDTTGIN VFPILSSGAI QTLTLRNVGL SGPIPSYIWS MPNLKNLDLS FNKLTGGVQE LEKAPANTYL TGNMLSGNVG
201: SALSIYEEAN IIGLLPCAGP MNCKRYQRSL HINCGGESTT VTNTSGKITY EADNSETKSV TNQHFQNWGI SNTGLLSNDI YTISTSLTLP GGSPDFYKTA
301: RRSAISLVYY AFCLENGAYN VKLHFMEIQF TDEKLYSRLG RRIFDVYIQG ELFLRDFNIK EEANGTLKPV VKEVSLNVTD HVLEIQLYWA GKGTTLIPER
401: GNYGPLISAI SLCHSSREPQ CGAEITKHHT KNTLIFGVTG AVVAITILAF GLYALKRCRG DKNTTERVDL KAQGLQTVCF TWRQLQTATN NFDQANKLGE
501: GGFGTVFKGE LSDGTIIAVK QLSSNSCQGN REFVNEIGMI SGLNHPNLVK LYGCCVEKNQ LLLVYEYMEN NSLALALYGN NSQTLDWETR QKICVGIARG
601: LEFLHEGSMI RMVHRDIKTT NVLLDADLNA KISDFGLARL HEEEHSHIST KIAGTIGYMA PEYALWGQLT EKADVYSFGV VAMEIVSGKS NVKPQGNDDH
701: VSLINWALAL HQTGDAMEVV DPVLQGDFNS KEAVRMIKVA LVCTNSSPAL RPTMLEAVQM LEGEMEITPV MSDHGLYEHN LSISKMRVTT TIGSSSTSGV
801: TNQTETTMKS DASGCDLYPL YPESMILNST SDLSSSSL

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.