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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72653 Canola cytosol 22.41 92.34
Bra030166.1-P Field mustard plasma membrane 64.38 90.76
CDX94698 Canola plasma membrane 30.33 78.68
CDY35283 Canola cytosol, plasma membrane, plastid 48.43 77.46
CDX99848 Canola plasma membrane 76.61 76.84
CDY43181 Canola cytosol 47.36 76.58
CDY44292 Canola plasma membrane 73.68 76.21
CDY43183 Canola mitochondrion, plasma membrane 64.77 75.23
CDY49080 Canola cytosol 35.81 75.15
CDX94701 Canola cytosol 52.45 75.07
CDY26319 Canola plasma membrane 74.46 74.9
CDX94703 Canola plasma membrane 63.11 74.48
CDY28419 Canola mitochondrion, plasma membrane 60.47 73.75
CDY35284 Canola plasma membrane 73.39 73.67
CDX94692 Canola plasma membrane 71.62 73.64
AT1G29720.1 Thale cress plasma membrane 72.9 73.11
CDY35293 Canola cytosol 56.95 72.12
CDX67411 Canola plasma membrane 49.9 71.83
CDY67675 Canola cytosol 9.0 71.32
CDY26317 Canola plasma membrane 70.25 70.88
CDX99849 Canola plasma membrane 69.96 70.86
CDX73325 Canola plasma membrane 62.92 64.69
CDX73324 Canola nucleus 1.96 64.52
CDY35292 Canola plasma membrane 70.35 64.14
CDX77648 Canola cytosol 26.13 61.38
CDX98146 Canola plasma membrane 55.19 56.4
CDY43187 Canola plasma membrane 55.28 56.39
CDX98148 Canola plasma membrane 56.07 56.34
CDY67674 Canola cytosol 40.31 55.9
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 25.73 55.84
CDY43185 Canola plasma membrane 54.6 52.0
VIT_10s0003g01990.t01 Wine grape plasma membrane 45.79 50.98
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 28.57 49.83
CDY35279 Canola plasma membrane 45.4 45.76
CDX93632 Canola plasma membrane 45.3 45.75
CDX75790 Canola peroxisome 41.98 45.69
CDX95138 Canola plasma membrane 45.21 45.65
CDX90208 Canola plasma membrane 45.21 45.56
CDX97605 Canola plasma membrane 40.41 45.04
CDX82464 Canola plasma membrane 42.56 44.66
CDX75791 Canola plasma membrane 44.32 44.63
CDX82465 Canola plasma membrane 44.23 44.53
CDX75792 Canola plasma membrane 42.17 44.25
CDX82466 Canola plasma membrane 44.13 44.22
CDX98497 Canola cytosol, plasma membrane, plastid 41.68 43.92
CDX99850 Canola plasma membrane 43.64 43.85
CDX98501 Canola plasma membrane 43.74 43.82
CDY26316 Canola plasma membrane 43.54 43.76
CDY20088 Canola plasma membrane 43.54 43.67
CDX97606 Canola plasma membrane 43.54 43.63
CDY32338 Canola plasma membrane 43.44 43.15
CDX90205 Canola plasma membrane 73.39 42.73
CDX81476 Canola cytosol 11.84 42.61
CDY60204 Canola plasma membrane 42.95 42.05
CDY25853 Canola plasma membrane 42.86 41.95
CDX97610 Canola plasma membrane 42.76 38.64
CDX67736 Canola plasma membrane 36.5 37.15
CDY59119 Canola plasma membrane 36.5 37.15
CDX98288 Canola plasma membrane 36.4 37.05
CDY42407 Canola plasma membrane 36.4 36.01
CDY10508 Canola plasma membrane 36.01 35.62
CDY10509 Canola plasma membrane 35.71 35.54
CDY22357 Canola plasma membrane 35.03 35.27
CDY25239 Canola plasma membrane 31.8 35.17
CDY47811 Canola plasma membrane 34.83 35.07
CDY46490 Canola plasma membrane 34.64 34.84
CDY68250 Canola plasma membrane 34.44 34.65
CDY12693 Canola plasma membrane 31.9 32.5
CDY38804 Canola golgi, plasma membrane 18.49 29.58
CDY11604 Canola plasma membrane 18.3 29.26
CDY03757 Canola plasma membrane 35.23 17.62
CDY43003 Canola plasma membrane 35.42 17.25
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078FGZ4
UniProt:A0A078FGZ4EnsemblPlants:CDY13695ProteinID:CDY13695ProteinID:CDY13695.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00078120001InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Malectin
PFAM:PF00069PFAM:PF11721PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE9CF6SEG:seg
Description
BnaA06g32280DBnaA06g32280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGZ4]
Coordinates
chrLK032037:-:623376..636046
Molecular Weight (calculated)
113018.0 Da
IEP (calculated)
7.023
GRAVY (calculated)
-0.097
Length
1022 amino acids
Sequence
(BLAST)
0001: MLIVFTVILL FFTITASFLA ISTSVSSVLH PDELNALKKI ATTLGIKGLD LSSGDPCYLG LLKMIPEVAI VSNPELRNNT IDCDCRFNNN TTCRIINIDL
0101: KTLSLRGILP PELAELHYLQ TIDLCRNYLS GSIPMEWASL PNLTYISLCA NRLSGRLPSG LQNFKNLRFL GVEANQFSGP IPDELGNLTN LKGLQLGSNQ
0201: FTGSLPNTLA RLVNLEDFRV SDNNFNGTIP AFIGNWSRLQ KLYLYASGLK GPIPDEIARL ENLTNLFVTD TIGINVFPNI SSQSIETLIL RNVSLSGPIP
0301: SYIWNMRNLK LLDLSFNKLT GDVHGARAPE YTYLTGNRLS GEVESGVFLK SNAHIDLSYN NFSWWPRCQE NSNINTYRSS YLNNLSELLP CAGPTNCTSY
0401: QRTLHINCGG DNIVITKSSH KITYQADNTK TKAATNQQFK DWGISNTGEF FSDGNNKAAT SNTDDTYIIS TNLTLPGGSP DIYKTARRSP LSLVYYAFCL
0501: ENGTYSVKLH FMEIQFSDQE LYNRLGRRIF DIYVQGVLFL RDFNIKKEAN GTLKPVVKTV SANVTNHILE IRLYWAGKGT TLIPERGNYG PLISAISLCH
0601: SMEPQCGAMK RELHFNYPLI LGVIGALIAV TLLALGLYAQ KRCIGDNYTR ERDLRAQGLQ TVCFTWRQLE AATNNFDEAN KLGEGGFGSV FKGGLSDGNI
0701: IAVKQLSSKS CQGNREFVNE IGMISGLNHP NLVKLYGCCV EKNQLMLVYE YMENNSLALA LFGKSSLKLK WEVRQNICVG IAKGLEFLHE GSTIRMVHRD
0801: IKTTNVLLDA DLNAKISDFG LARLHEEEHT HISTKIAGTV GYMAPEYALW GHLTEKADVY SFGVVAMEIV SGKSNMKRKG SADHVSLINW AVTLQQRGDI
0901: MEIVDPTLEG DFNIKEAVRM IKVAFVCTNS SPSLRPTMSE AVRMLQGEIK ITEVMSDPGL YGHNWSISNL MDIDTHGSSS TSGVAAQTAA TMQSSVSGGD
1001: LYPFYNESMI LNSTTEFSSS PI
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.