CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72653	Canola	cytosol	33.1	58.06
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	51.26	47.35
CDY49080	Canola	cytosol	51.72	46.2
CDX94698	Canola	plasma membrane	41.15	45.43
CDY35283	Canola	cytosol, plasma membrane, plastid	60.92	41.47
CDY43181	Canola	cytosol	59.08	40.66
CDX81476	Canola	cytosol	25.52	39.08
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	52.64	39.08
CDY43187	Canola	plasma membrane	89.43	38.82
CDX98146	Canola	plasma membrane	88.74	38.6
CDX98148	Canola	plasma membrane	88.74	37.95
CDX67411	Canola	plasma membrane	60.0	36.76
CDX94701	Canola	cytosol	60.0	36.55
AT1G29730.2	Thale cress	plasma membrane	82.76	35.96
CDY67674	Canola	cytosol	60.23	35.55
CDY43185	Canola	plasma membrane	87.13	35.32
AT1G29740.1	Thale cress	plasma membrane	85.52	34.51
CDY35293	Canola	cytosol	60.69	32.71
CDY28419	Canola	mitochondrion, plasma membrane	60.0	31.15
CDX94703	Canola	plasma membrane	60.23	30.25
CDY43183	Canola	mitochondrion, plasma membrane	60.92	30.11
VIT_10s0003g01990.t01	Wine grape	plasma membrane	62.07	29.41
CDY44292	Canola	plasma membrane	60.0	26.42
CDY35284	Canola	plasma membrane	61.61	26.33
CDY13695	Canola	plasma membrane	61.38	26.13
CDX99849	Canola	plasma membrane	60.46	26.07
CDX73325	Canola	plasma membrane	59.54	26.06
CDX94692	Canola	plasma membrane	59.31	25.96
CDX97605	Canola	plasma membrane	54.48	25.85
CDX99848	Canola	plasma membrane	60.46	25.81
CDX75790	Canola	peroxisome	55.63	25.77
CDY26319	Canola	plasma membrane	60.0	25.69
CDY26317	Canola	plasma membrane	59.77	25.67
CDX93632	Canola	plasma membrane	58.16	25.0
CDX95138	Canola	plasma membrane	57.93	24.9
CDX75792	Canola	plasma membrane	55.4	24.74
CDX82464	Canola	plasma membrane	55.17	24.64
CDX98497	Canola	cytosol, plasma membrane, plastid	53.56	24.02
CDX82466	Canola	plasma membrane	55.86	23.82
CDY35292	Canola	plasma membrane	60.69	23.55
CDX82465	Canola	plasma membrane	54.71	23.45
CDX75791	Canola	plasma membrane	54.71	23.45
CDX97606	Canola	plasma membrane	54.02	23.04
CDX98501	Canola	plasma membrane	53.79	22.94
CDY60204	Canola	plasma membrane	54.94	22.89
CDY25853	Canola	plasma membrane	54.71	22.8
CDY20088	Canola	plasma membrane	53.33	22.77
CDY32338	Canola	plasma membrane	52.87	22.35
CDY35279	Canola	plasma membrane	51.03	21.89
CDX90208	Canola	plasma membrane	51.03	21.89
CDY25239	Canola	plasma membrane	44.6	21.0
CDX99850	Canola	plasma membrane	48.74	20.85
CDY26316	Canola	plasma membrane	48.74	20.85
CDX97610	Canola	plasma membrane	53.79	20.69
CDY42407	Canola	plasma membrane	47.82	20.14
CDX98288	Canola	plasma membrane	46.21	20.02
CDY59119	Canola	plasma membrane	46.21	20.02
CDY10509	Canola	plasma membrane	47.13	19.96
CDX67736	Canola	plasma membrane	45.98	19.92
CDY22357	Canola	plasma membrane	46.44	19.9
CDY10508	Canola	plasma membrane	47.13	19.85
CDY12693	Canola	plasma membrane	45.75	19.84
CDY47811	Canola	plasma membrane	46.21	19.8
CDY46490	Canola	plasma membrane	45.75	19.59
CDY68250	Canola	plasma membrane	45.29	19.39
CDX90205	Canola	plasma membrane	61.38	15.21
CDY38804	Canola	golgi, plasma membrane	14.94	10.17
CDY03757	Canola	plasma membrane	46.9	9.99
CDY11604	Canola	plasma membrane	14.48	9.86
CDY43003	Canola	plasma membrane	47.13	9.77
CDY67675	Canola	cytosol	0.69	2.33
CDX73324	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	Gene3D:2.60.120.430	Gene3D:3.30.200.20	MapMan:50.2.7	GO:A0A078CR89	EnsemblPlants:CDX77648
ProteinID:CDX77648	ProteinID:CDX77648.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00128592001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	InterPro:Malectin	PFAM:PF00069	PFAM:PF11721	PIRSF:PIRSF000615	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF92	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE2765	SEG:seg	:	:	:

Description

BnaC07g19020D

Coordinates

chrLK031812:-:512752..514883

Molecular Weight (calculated)

49020.8 Da

IEP (calculated)

6.638

GRAVY (calculated)

-0.203

Length

435 amino acids

Sequence
(BLAST)

001: MSYHHFAFKI NRYLDHSISS ESPVSAKYPE LYQTARRSPL SLAYFAFCFE NGSYNVKLHF SEIQFSDEEP YSRLGKRLFN IYVQGKLIWE DFNIRVEANG
101: THKEVIKEVN TTVTDNTLEI RLYWAGKGTT IIPKRGNYGS LISAISVCPS SESECGEMQI QETEVMILGS FSLKQLKLAT DNFDPSKQDW ISNFLTIQGQ
201: LPDGTLIAVK KLSSKSCQGN KEFVNEIGMI ACLQHPNLVK LYGCCCENNQ LLLVYEYLEN NYAGRSGLKL EWGTRHKICL GIARGLAFLH EDSAVKIIHR
301: DIKGTNVLLD KDLNSKISDF GLARLHEDDK SHITTRVAGT IGYMAPEYAM RGHLTEKADV YSFSVVAMEI VSGKSNANYT PDNECCVGLL DWAFVLQKKG
401: AFSEILDPKL EGVFDVMEAE RMIKVSLLCS NMLRP

Best Arabidopsis Sequence Match ( AT1G29730.1 )
(BLAST)

001: MSAAYNLMIK SKSCLFSSSI LFVVTLIYLL CTVSASPSLH PDEVEALKDI TETLGVKHLN LSEDPCLTKT LVISQGVLKE GQNSTIRCDC HFNNYSTCHI
101: KHFVLQKFNL PGRLPPMLYK FRHLESIDLY NNYLYGSIPM EWASLPYLKS ISVCANRLSG DIPKGLGKFI NLTLLVLEAN QFSGTIPKEL GNLVNLQGLG
201: LSSNQLVGGL PKTLAKLTKL TNLHLSDNRL NGSIPEFIGK LPKLQRLELY ASGLRGPIPD SIFHLENLID VRISDTVAGL GHVPQITSTS LKYLVLRNIN
301: LSGPIPTSIW DLPSLMTLDL SFNRLTGEIP AYATAPKYTY LAGNMLSGKV ETGAFLTAST NIDLSYNNFT WSPMCKERKN INTYESSHSK NRLTRLLPCS
401: AIKQCQNYSR SLHINCGGPD VTIENSRGRF LYEGDNYGLT GSATNYYRKN WGYSNTGDFM DDAITEDTYT VSSESAVSAK YPDLYQNARR SPLSLAYYAF
501: CFENGSYNVK LHFAEIQFSD VEPYTKLAKR VFNIYIQGKL IWEDFSIREE ANGTHKEVIR EVNTTVTDNT LEIRLYWAGK GTMIIPQRGY YGSLISAVSV
601: CPSSESECGG MKKKISKLKG PDLRTGSFSL RQLKVATNDF DPLNKIGEGG FGSVYKGRLP DGTLIAVKKL SSKSHQGNKE FVNEIGMIAC LQHPNLVKLY
701: GCCVEKNQLL LVYEYLENNC LSDALFAGRS CLKLEWGTRH KICLGIARGL AFLHEDSAVK IIHRDIKGTN VLLDKDLNSK ISDFGLARLH EDNQSHITTR
801: VAGTIGYMAP EYAMRGHLTE KADVYSFGVV AMEIVSGKSN AKYTPDDECC VGLLDWAFVL QKKGDIAEIL DPRLEGMFDV MEAERMIKVS LLCANKSSTL
901: RPNMSQVVKM LEGETEIEQI ISDPGVYSDN LHFKPSSLSS DYILSIPSSS ESAYDLYPLS PESIVFTIQ

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:TAIR;Acc:AT1G29730]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.