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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032332.1-P Field mustard plasma membrane 91.41 97.06
CDX99849 Canola plasma membrane 95.56 95.94
CDY72653 Canola cytosol 20.53 83.87
CDY35293 Canola cytosol 61.2 76.83
CDY43183 Canola mitochondrion, plasma membrane 66.14 76.14
CDX94703 Canola plasma membrane 64.36 75.29
CDY35283 Canola cytosol, plasma membrane, plastid 47.09 74.65
CDX94698 Canola plasma membrane 28.83 74.11
CDY35284 Canola plasma membrane 73.45 73.08
CDX99848 Canola plasma membrane 72.85 72.42
CDY49080 Canola cytosol 34.75 72.28
AT1G29720.1 Thale cress plasma membrane 72.56 72.13
CDY26319 Canola plasma membrane 71.47 71.26
CDY44292 Canola plasma membrane 69.1 70.85
CDX67411 Canola plasma membrane 49.56 70.7
CDY28419 Canola mitochondrion, plasma membrane 58.44 70.64
CDY43181 Canola cytosol 43.93 70.41
CDY13695 Canola plasma membrane 70.88 70.25
CDX94701 Canola cytosol 49.26 69.89
CDX94692 Canola plasma membrane 67.03 68.31
CDY67675 Canola cytosol 8.39 65.89
CDY35292 Canola plasma membrane 70.58 63.78
CDX73325 Canola plasma membrane 60.71 61.87
CDX77648 Canola cytosol 25.67 59.77
CDY43187 Canola plasma membrane 54.99 55.59
CDX98148 Canola plasma membrane 55.77 55.56
CDX98146 Canola plasma membrane 54.69 55.4
CDY67674 Canola cytosol 40.08 55.09
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 24.38 52.44
CDY43185 Canola plasma membrane 54.1 51.07
VIT_10s0003g01990.t01 Wine grape plasma membrane 45.11 49.78
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 27.64 47.78
CDX95138 Canola plasma membrane 46.3 46.34
CDX93632 Canola plasma membrane 46.3 46.34
CDY35279 Canola plasma membrane 45.11 45.07
CDX90208 Canola plasma membrane 45.01 44.97
CDX97605 Canola plasma membrane 40.67 44.93
CDX75790 Canola peroxisome 41.56 44.83
CDX82464 Canola plasma membrane 42.35 44.05
CDX75792 Canola plasma membrane 42.25 43.94
CDY26316 Canola plasma membrane 44.03 43.85
CDX99850 Canola plasma membrane 43.93 43.76
CDX82466 Canola plasma membrane 43.63 43.33
CDX75791 Canola plasma membrane 43.34 43.25
CDX98501 Canola plasma membrane 43.53 43.24
CDY20088 Canola plasma membrane 43.44 43.18
CDX97606 Canola plasma membrane 43.44 43.14
CDX82465 Canola plasma membrane 43.14 43.05
CDX98497 Canola cytosol, plasma membrane, plastid 41.16 42.99
CDX90205 Canola plasma membrane 74.33 42.91
CDY32338 Canola plasma membrane 43.53 42.86
CDY60204 Canola plasma membrane 43.73 42.43
CDX81476 Canola cytosol 11.85 42.25
CDY25853 Canola plasma membrane 43.53 42.24
CDX73324 Canola nucleus 1.28 41.94
CDX97610 Canola plasma membrane 42.15 37.75
CDY59119 Canola plasma membrane 36.53 36.85
CDX67736 Canola plasma membrane 36.43 36.75
CDX98288 Canola plasma membrane 36.33 36.65
CDY10509 Canola plasma membrane 36.23 35.74
CDY25239 Canola plasma membrane 32.48 35.61
CDY46490 Canola plasma membrane 35.64 35.53
CDY42407 Canola plasma membrane 36.23 35.53
CDY47811 Canola plasma membrane 35.44 35.37
CDY68250 Canola plasma membrane 35.44 35.33
CDY22357 Canola plasma membrane 35.24 35.17
CDY10508 Canola plasma membrane 35.83 35.14
CDY12693 Canola plasma membrane 31.79 32.1
CDY38804 Canola golgi, plasma membrane 19.25 30.52
CDY11604 Canola plasma membrane 19.05 30.2
CDY03757 Canola plasma membrane 36.03 17.87
CDY43003 Canola plasma membrane 36.33 17.54
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078GM87
UniProt:A0A078GM87EnsemblPlants:CDY26317ProteinID:CDY26317ProteinID:CDY26317.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00035020001InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Malectin
PFAM:PF00069PFAM:PF11721PFAM:PF13855PRINTS:PR00019ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDE5D5
SEG:seg:::::
Description
BnaA09g26680DBnaA09g26680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GM87]
Coordinates
chrLK032187:+:514825..520625
Molecular Weight (calculated)
112689.0 Da
IEP (calculated)
6.833
GRAVY (calculated)
-0.148
Length
1013 amino acids
Sequence
(BLAST)
0001: MSIMGIFFSA LLCFTIITSF SVIQIQTTST SPALYSDELN ALEKIATTLG IKRVNLSHED PCSSGTLMIT QQVDFVWNPE VNNTIACDCS FNNNTTCHIT
0101: ELVLRNFTLE GKLPPDLAKL RYLQSIDLSA NYLTGTIPVE WASMSHLILI SLSGNSLSGS LPTWLQNLKN LKFLGLEGNQ FSGPIPDELG NLTNLERLYL
0201: SSNQFTGSLP ITLAKLVNLE RFWICDNNFS GTFPAYMGNW SQLKRLYLYA SGLKGPIPDA VASLENLTDL RISDTTGIDS FPILSSKVID TLILRNLNLS
0301: GPIPSYIWNL PNLKRLDLSF NKLTGEVQDI HKAPKFTYLA GNMLTGNFES AFFFNNKPNI DLSYNNLTWS SSCHNKSNIN TYRSSNWKNN LTGLLPCAGP
0401: ITCKSYQRSL HINCGGGTVQ ITNSSRRITY QADNNKVLAA TNLHMEGWGI SNTGDFTDDT SDDDTFIIST SLRISGGSPD IYKTARRSAL SLVYYAFCLE
0501: NGAYNVKLHF MEIQFSDKEV YSRIGRRIFD VYVQGELFLK DFNIKDDANG TLNPVVKELK AVNVTDHMLE IRLYWAGKGT TFIPNRGYYG PLISAISLCH
0601: SHDPLCGAEK IKHHINYPLV LGATGAFVTT TLLALGIYAW RRRRGDNIRR ERDLRSQSLQ TVCYTWRQLK AATNNFNQAN KLGEGGFGAV FKGELPDGTI
0701: IAVKQLSSKS HQGNREFVNE IGMISGLNHP NLVKLYGCCV EKNQLLLVYE YMENNSLALV LHAKSSLKLD WVARKKICVG IAKGLEFLHE GSMIRMVHRD
0801: IKTSNVLLDA DLNAKISDFG LARLHEEENT HISTKVAGTM GYMAPEYVLW GQLTEKVDVY SFGVVVMEIV SGQSNTKHKG SDDDQVSLIN WALTLQQKGD
0901: ILEIVDPMLE GEFNSKEAVR MINVALVCTN SSPSMRPTMS ETVQMLEGVI EIKEVMPDSG LYGHDWSMSK LMHIDTRGRS STSGVTDQTE TSMKSSVSGF
1001: DLYQYPSSSL ECP
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.