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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028415.1-P Field mustard cytosol, plasma membrane, plastid 69.3 99.8
CDY49080 Canola cytosol 65.49 95.48
CDY72653 Canola cytosol 28.59 81.85
CDX94698 Canola plasma membrane 40.7 73.35
CDY35283 Canola cytosol, plasma membrane, plastid 65.49 72.77
CDY43181 Canola cytosol 62.68 70.41
CDX94701 Canola cytosol 69.3 68.91
CDY35293 Canola cytosol 69.44 61.09
CDX77648 Canola cytosol 36.76 60.0
CDY28419 Canola mitochondrion, plasma membrane 68.59 58.11
CDX94703 Canola plasma membrane 69.3 56.81
CDY43183 Canola mitochondrion, plasma membrane 69.3 55.91
CDY67674 Canola cytosol 56.9 54.82
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 34.51 52.02
CDX73324 Canola nucleus 2.25 51.61
AT1G29720.1 Thale cress plasma membrane 73.38 51.13
CDX99849 Canola plasma membrane 72.11 50.74
CDY35284 Canola plasma membrane 72.39 50.49
CDY44292 Canola plasma membrane 69.72 50.1
CDX99848 Canola plasma membrane 71.83 50.05
CDY13695 Canola plasma membrane 71.83 49.9
CDY26317 Canola plasma membrane 70.7 49.56
CDY26319 Canola plasma membrane 69.58 48.62
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 39.15 47.44
CDX94692 Canola plasma membrane 65.35 46.68
CDX73325 Canola plasma membrane 65.21 46.58
CDY35292 Canola plasma membrane 68.45 43.35
CDX81476 Canola cytosol 17.32 43.31
CDY67675 Canola cytosol 7.75 42.64
CDY43187 Canola plasma membrane 55.77 39.52
CDX98148 Canola plasma membrane 56.34 39.33
CDX98146 Canola plasma membrane 55.07 39.1
VIT_10s0003g01990.t01 Wine grape plasma membrane 48.31 37.36
CDX97605 Canola plasma membrane 45.92 35.55
CDY43185 Canola plasma membrane 52.96 35.04
CDX75790 Canola peroxisome 46.34 35.04
CDX98497 Canola cytosol, plasma membrane, plastid 45.21 33.09
CDX93632 Canola plasma membrane 46.62 32.71
CDX95138 Canola plasma membrane 46.48 32.61
CDX82466 Canola plasma membrane 46.34 32.25
CDX98501 Canola plasma membrane 46.06 32.06
CDY20088 Canola plasma membrane 45.92 31.99
CDX97606 Canola plasma membrane 45.92 31.96
CDX75792 Canola plasma membrane 43.8 31.93
CDX82464 Canola plasma membrane 43.66 31.83
CDX82465 Canola plasma membrane 45.49 31.82
CDX75791 Canola plasma membrane 45.35 31.72
CDY35279 Canola plasma membrane 44.93 31.46
CDX90208 Canola plasma membrane 44.79 31.36
CDY32338 Canola plasma membrane 45.21 31.2
CDY26316 Canola plasma membrane 44.23 30.88
CDX99850 Canola plasma membrane 43.94 30.68
CDY60204 Canola plasma membrane 43.8 29.79
CDY25853 Canola plasma membrane 43.52 29.6
CDX90205 Canola plasma membrane 71.83 29.06
CDX97610 Canola plasma membrane 44.79 28.12
CDY25239 Canola plasma membrane 36.34 27.92
CDY59119 Canola plasma membrane 38.87 27.49
CDX67736 Canola plasma membrane 38.87 27.49
CDX98288 Canola plasma membrane 38.87 27.49
CDY42407 Canola plasma membrane 38.17 26.23
CDY46490 Canola plasma membrane 37.46 26.18
CDY68250 Canola plasma membrane 37.32 26.08
CDY47811 Canola plasma membrane 37.18 26.01
CDY10508 Canola plasma membrane 37.75 25.94
CDY10509 Canola plasma membrane 37.32 25.8
CDY22357 Canola plasma membrane 36.76 25.71
CDY12693 Canola plasma membrane 34.51 24.43
CDY38804 Canola golgi, plasma membrane 13.94 15.49
CDY11604 Canola plasma membrane 13.24 14.71
CDY03757 Canola plasma membrane 38.31 13.31
CDY43003 Canola plasma membrane 38.45 13.01
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20GO:A0A078BRZ8EnsemblPlants:CDX67411
ProteinID:CDX67411ProteinID:CDX67411.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00098498001InterPro:IPR000719
InterPro:Kinase-like_dom_sfInterPro:MalectinPFAM:PF07714PFAM:PF11721ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF54InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EEEE7F
SEG:seg:::::
Description
BnaA07g14510D
Coordinates
chrLK031787:+:72030..84270
Molecular Weight (calculated)
78586.0 Da
IEP (calculated)
6.590
GRAVY (calculated)
-0.219
Length
710 amino acids
Sequence
(BLAST)
001: MHMYFMILLV ISISILDLSF NKLTGEVEAV KAPKNTYLTG NMLSGNISAG VFLNDDKSNI DLSYNNLSLP SSCQEKSDIN TYRSSNWKDN LSGMLPCAGP
101: IKCLGYQKSL HINCGGESVN IKNSLGKINY QADNIEPTAS TNQHSINWGV SNTGDFTDDG NDDDTYIIST DSPLPGEYSD LYKTARRSAL SLVYYAFCLE
201: NGTYNVNLHF MEIQFTEELY MSLGRRIFDV YVQGKLFLRD FNIKEEANGT MKPIVQELKD VNVTNHVLEI RLYWAGKGTT LIPNRGYYGP LISAISLCHS
301: QERRCGVEKT KHHTNYPMIS GAIGGLVAIL LLALGIYAAR KRYIEDKSTK ERAQGLQTNC FTWRQLQAAT NNFDQANKLG EGGFGSVFKG ELSNGTIIAV
401: KQLSSESSQG NREFVNEIGM ISGLNHPNLV KLYGCCVEKN QLLLVYEYME KNSLALALFG KSSHKLNWST RQKICVGIAR GLEFLHHGST IKMVHRDIKT
501: TNVLLDTDFN AKISDFGLAR LHDGEHSHIS TKVAGTIGYM APEYALRGHL TEKVDVYSFG IVAMEIVSGR STVKKKGSAD DVPLINWALT LEKRGDIMEV
601: IDPILEGDFK SEEAVRMIKV ALLCTNSTLS LRPTMSEAVQ MLEGDLKITS VMPDHGLYGH NLSISKLMDI DTTTHGSSST TTGTTDLEMK SSVSSYDLYP
701: LNPESTILNS
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.