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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030161.1-P Field mustard plasma membrane 69.23 95.8
CDX94692 Canola plasma membrane 87.96 87.42
CDY72653 Canola cytosol 21.66 86.29
CDX94698 Canola plasma membrane 32.09 80.46
CDY35283 Canola cytosol, plasma membrane, plastid 49.29 76.21
CDY43181 Canola cytosol 48.68 76.11
CDX94701 Canola cytosol 54.86 75.91
CDY13695 Canola plasma membrane 76.21 73.68
CDY43183 Canola mitochondrion, plasma membrane 65.49 73.52
CDX99848 Canola plasma membrane 75.71 73.41
CDY49080 Canola cytosol 36.13 73.31
CDX94703 Canola plasma membrane 63.56 72.52
CDY28419 Canola mitochondrion, plasma membrane 61.44 72.43
CDY26319 Canola plasma membrane 73.48 71.46
AT1G29720.1 Thale cress plasma membrane 73.28 71.05
CDY35284 Canola plasma membrane 72.98 70.83
CDY35293 Canola cytosol 57.69 70.63
CDX67411 Canola plasma membrane 50.1 69.72
CDX99849 Canola plasma membrane 70.85 69.38
CDY26317 Canola plasma membrane 70.85 69.1
CDY67675 Canola cytosol 8.6 65.89
CDX73325 Canola plasma membrane 64.07 63.68
CDY35292 Canola plasma membrane 70.95 62.53
CDX77648 Canola cytosol 26.42 60.0
CDX98146 Canola plasma membrane 57.09 56.4
CDY43187 Canola plasma membrane 57.19 56.39
CDX98148 Canola plasma membrane 57.59 55.95
CDY67674 Canola cytosol 41.4 55.5
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 26.32 55.2
CDY43185 Canola plasma membrane 55.77 51.35
VIT_10s0003g01990.t01 Wine grape plasma membrane 46.96 50.54
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 29.45 49.66
CDX75790 Canola peroxisome 43.12 45.37
CDX93632 Canola plasma membrane 46.05 44.96
CDX95138 Canola plasma membrane 45.95 44.86
CDX90208 Canola plasma membrane 45.45 44.28
CDX97605 Canola plasma membrane 41.09 44.27
CDX82464 Canola plasma membrane 43.52 44.15
CDY35279 Canola plasma membrane 45.24 44.08
CDX99850 Canola plasma membrane 45.24 43.95
CDX75792 Canola plasma membrane 43.32 43.94
CDX75791 Canola plasma membrane 44.94 43.74
CDX82465 Canola plasma membrane 44.94 43.74
CDX98497 Canola cytosol, plasma membrane, plastid 42.91 43.71
CDY20088 Canola plasma membrane 45.04 43.67
CDY26316 Canola plasma membrane 44.94 43.66
CDX98501 Canola plasma membrane 45.04 43.63
CDX82466 Canola plasma membrane 44.84 43.43
CDX97606 Canola plasma membrane 44.53 43.14
CDX81476 Canola cytosol 12.35 42.96
CDY32338 Canola plasma membrane 44.74 42.95
CDX73324 Canola nucleus 1.32 41.94
CDY60204 Canola plasma membrane 44.13 41.76
CDY25853 Canola plasma membrane 43.83 41.48
CDX90205 Canola plasma membrane 72.87 41.03
CDX97610 Canola plasma membrane 43.52 38.02
CDX67736 Canola plasma membrane 36.44 35.86
CDY59119 Canola plasma membrane 36.34 35.76
CDX98288 Canola plasma membrane 36.34 35.76
CDY42407 Canola plasma membrane 36.74 35.14
CDY10509 Canola plasma membrane 36.44 35.05
CDY46490 Canola plasma membrane 36.03 35.04
CDY68250 Canola plasma membrane 36.03 35.04
CDY10508 Canola plasma membrane 36.44 34.85
CDY47811 Canola plasma membrane 35.63 34.68
CDY22357 Canola plasma membrane 35.53 34.58
CDY25239 Canola plasma membrane 32.19 34.42
CDY12693 Canola plasma membrane 33.4 32.9
CDY38804 Canola golgi, plasma membrane 18.83 29.11
CDY11604 Canola plasma membrane 18.52 28.64
CDY03757 Canola plasma membrane 36.34 17.57
CDY43003 Canola plasma membrane 36.54 17.21
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078I2L5
UniProt:A0A078I2L5EnsemblPlants:CDY44292ProteinID:CDY44292ProteinID:CDY44292.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00079920001InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Malectin
PFAM:PF07714PFAM:PF11721PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDCF5D
SEG:seg:::::
Description
BnaA07g07760DBnaA07g07760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2L5]
Coordinates
chrLK032585:+:73215..82104
Molecular Weight (calculated)
109073.0 Da
IEP (calculated)
7.399
GRAVY (calculated)
-0.156
Length
988 amino acids
Sequence
(BLAST)
001: MSTVFSILHL KITIIISFFA ISTTYASSDL HPDELNVLEN ITTTLGGKGL NLSYGDPCKL KFLKIDQKIG DPEIKNTILC DVCFNSTCHI TKIVLKTLSL
101: PGKLPPELAN LRYLQSIDLC RNYLSGTIPM EWASLPNLTS ISLCANNFSG TLPTGLQNFK NLTFLSLEAN QFFGTIPDEL GNLTNLNGLQ LGSNQFNGSL
201: PSTLARLVNL TDFRVSDNNF QGTIPEYIGK WSQLNKLHLY ASGLKGPMPE KVALLEKLTD LRISDTTGIN IVPNLSSYGI KTLILRNVGL SGPIPPSVWK
301: LSGLKTLDLS FNKLTGEVNG DEAPKYTYLT GNRLSGNVES SGFLNSYSNI DLSYNNFSWS STCHEKSNIN TYRSSHLMKN LTGLLPCAGP VNCTDYQGFL
401: HINCGGGNIV ITNSSYETTY EADNNVTTAA TSQHFKNWGI SNTGEFSDDD QENDIYFSST LSRDPSELYK TARRSALSLV YYAFCLKNGT YNVKLHFMET
501: QFSDEEPYSR LGIRIFDVFV QGELFLKDFN IKKEATGTLK PIVKEKKVNV TNHMLEIRLY WAGKGTTLIP RRGNYGPLIS AISLCHQIEK KKHHTDYPLI
601: FGVSGSVIAI TLLALGLYAQ KRCRGDKNTR ERDLRAQGLQ TVCFTWRQLQ AATNNFDEAN KLGEGGFGSV FKGELSDGTI IAVKQLSAKS CQGNREFVNE
701: IGMISGLSHP NLVKLYGCCV EKIQLLLVYE YMENNSLALA LSGKSNSLKL DWAARQNICI GIAKGLEFLH EGSMIRMVHR DIKSTNVLLD SDLNAKISDF
801: GLARLHEEDH SHISTKIAGT IGYMAPEYAL WGQLTEKADV YSFGVVAMEI VSGKSNTKQK GILDHVSLIN WALTLQQTGD IMKIVDPRLE GHFNIKEAVR
901: MIKVAFVCTN SSPSLRPAMS EAVQMLEGEI EITQVMSDPG LYDHNLSISK LRGTDAHGSS STSGLTQTTT TMKSSVSSCD LYPLYLNP
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.