CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35292	Canola	plasma membrane	98.45	11.33
CDY35284	Canola	plasma membrane	89.15	11.3
CDX99848	Canola	plasma membrane	72.87	9.22
CDY13695	Canola	plasma membrane	71.32	9.0
CDY43183	Canola	mitochondrion, plasma membrane	59.69	8.75
CDX99849	Canola	plasma membrane	67.44	8.62
CDY44292	Canola	plasma membrane	65.89	8.6
CDY26317	Canola	plasma membrane	65.89	8.39
CDX73325	Canola	plasma membrane	64.34	8.35
AT1G29720.1	Thale cress	plasma membrane	65.89	8.34
CDX67411	Canola	plasma membrane	42.64	7.75
CDY26319	Canola	plasma membrane	58.14	7.38
CDY43187	Canola	plasma membrane	56.59	7.29
CDY28419	Canola	mitochondrion, plasma membrane	47.29	7.28
CDX98148	Canola	plasma membrane	56.59	7.18
CDX94692	Canola	plasma membrane	55.04	7.14
CDX98146	Canola	plasma membrane	55.04	7.1
CDX94703	Canola	plasma membrane	47.29	7.04
CDX94701	Canola	cytosol	37.98	6.86
CDY38804	Canola	golgi, plasma membrane	33.33	6.73
CDX90205	Canola	plasma membrane	89.92	6.61
CDY11604	Canola	plasma membrane	32.56	6.57
CDY43185	Canola	plasma membrane	54.26	6.52
CDY35293	Canola	cytosol	36.43	5.82
CDX97605	Canola	plasma membrane	37.21	5.23
CDX75790	Canola	peroxisome	37.98	5.22
CDX95138	Canola	plasma membrane	39.53	5.04
CDX93632	Canola	plasma membrane	39.53	5.04
CDX82464	Canola	plasma membrane	37.98	5.03
CDX75791	Canola	plasma membrane	39.53	5.02
CDX82465	Canola	plasma membrane	39.53	5.02
CDY60204	Canola	plasma membrane	40.31	4.98
CDX75792	Canola	plasma membrane	37.21	4.93
CDX82466	Canola	plasma membrane	37.98	4.8
CDX98501	Canola	plasma membrane	37.98	4.8
CDY25853	Canola	plasma membrane	38.76	4.79
CDX90208	Canola	plasma membrane	37.21	4.73
CDY32338	Canola	plasma membrane	37.21	4.66
CDX99850	Canola	plasma membrane	36.43	4.62
CDY26316	Canola	plasma membrane	36.43	4.62
CDY20088	Canola	plasma membrane	36.43	4.61
CDX97606	Canola	plasma membrane	36.43	4.61
CDY25239	Canola	plasma membrane	32.56	4.55
CDY35279	Canola	plasma membrane	35.66	4.54
CDX67736	Canola	plasma membrane	34.88	4.48
CDY59119	Canola	plasma membrane	34.88	4.48
CDX98288	Canola	plasma membrane	34.88	4.48
CDX98497	Canola	cytosol, plasma membrane, plastid	32.56	4.33
CDY10509	Canola	plasma membrane	33.33	4.19
CDX97610	Canola	plasma membrane	36.43	4.16
CDY42407	Canola	plasma membrane	31.78	3.97
CDY22357	Canola	plasma membrane	31.01	3.94
CDY47811	Canola	plasma membrane	31.01	3.94
CDY46490	Canola	plasma membrane	31.01	3.94
CDY68250	Canola	plasma membrane	31.01	3.94
CDY10508	Canola	plasma membrane	31.01	3.87
VIT_10s0003g01990.t01	Wine grape	plasma membrane	22.48	3.16
CDY03757	Canola	plasma membrane	34.11	2.15
CDY43003	Canola	plasma membrane	34.11	2.1
CDY12693	Canola	plasma membrane	13.95	1.79
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	3.88	0.85
CDX77648	Canola	cytosol	2.33	0.69
CDY43181	Canola	cytosol	3.1	0.63
CDY67674	Canola	cytosol	3.1	0.54
CDY35283	Canola	cytosol, plasma membrane, plastid	0.78	0.16
CDX94698	Canola	plasma membrane	0.0	0.0
CDY49080	Canola	cytosol	0.0	0.0
CDY72653	Canola	cytosol	0.0	0.0
CDX73324	Canola	nucleus	0.0	0.0
CDX81476	Canola	cytosol	0.0	0.0
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY67675	EnsemblPlantsGene:GSBRNA2T00065975001	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	ProteinID:CDY67675
ProteinID:CDY67675.1	SUPFAM:SSF52058	UniParc:UPI0004EDC07D	UniProt:A0A078JMK4	MapMan:35.1	:

Description

BnaCnng55910DBnaCnng55910D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JMK4]

Coordinates

chrLK036382:-:8099..9184

Molecular Weight (calculated)

14382.2 Da

IEP (calculated)

9.419

GRAVY (calculated)

-0.140

Length

129 amino acids

Sequence
(BLAST)

001: ARLENLTNLI ISDMTGINSF PNISSQVIQN LILRNVSMSG PIPSYIWSKP VLRSLDLSFN KLTGEVGINL VPKLTYLTGN MLSGEIKSGV YLNSKSNIDL
101: SYNNFSWPSS CQERSNINTY RSSYLNNTL

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.