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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, plastid
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98501 Canola plasma membrane 93.71 89.12
CDX97606 Canola plasma membrane 90.1 85.69
CDX97605 Canola plasma membrane 80.0 84.62
CDX75790 Canola peroxisome 79.48 82.11
CDX82466 Canola plasma membrane 81.86 77.84
CDY20088 Canola plasma membrane 78.76 74.98
CDX97610 Canola plasma membrane 87.22 74.8
CDY32338 Canola plasma membrane 78.35 73.86
CDX82465 Canola plasma membrane 75.67 72.32
AT3G14840.2 Thale cress plasma membrane 75.67 71.96
CDX75791 Canola plasma membrane 75.26 71.92
CDX82464 Canola plasma membrane 70.82 70.53
CDX75792 Canola plasma membrane 70.21 69.92
CDY72653 Canola cytosol 16.08 62.9
VIT_19s0014g00530.t01 Wine grape plasma membrane 29.69 58.42
KRH75938 Soybean cytosol 34.02 58.2
VIT_19s0014g00470.t01 Wine grape plasma membrane 58.76 56.6
VIT_19s0014g00520.t01 Wine grape plasma membrane 58.14 55.79
KRH55301 Soybean cytosol, plasma membrane, vacuole 25.88 55.16
VIT_19s0014g00500.t01 Wine grape plasma membrane 57.84 54.79
KRH21897 Soybean cytosol, plasma membrane 40.82 54.62
KRH27395 Soybean cytosol, plasma membrane 50.31 54.46
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 32.78 54.27
KRH21906 Soybean endoplasmic reticulum 55.88 54.25
CDX77648 Canola cytosol 24.02 53.56
KRH75931 Soybean cytosol 34.43 53.02
KRH55298 Soybean cytosol, nucleus, plasma membrane, plastid 40.21 52.56
KRH27397 Soybean plasma membrane 52.58 50.8
CDX94698 Canola plasma membrane 20.31 50.0
KRH75939 Soybean plasma membrane 50.31 48.9
CDY49080 Canola cytosol 24.43 48.67
CDY35283 Canola cytosol, plasma membrane, plastid 31.34 47.57
KRH21905 Soybean plasma membrane 50.41 47.2
CDX93632 Canola plasma membrane 48.87 46.84
CDX95138 Canola plasma membrane 48.76 46.74
CDX81476 Canola cytosol 13.61 46.48
CDX90208 Canola plasma membrane 47.84 45.76
CDY35279 Canola plasma membrane 47.63 45.56
CDY43183 Canola mitochondrion, plasma membrane 41.24 45.45
CDY43181 Canola cytosol 29.59 45.41
CDX94703 Canola plasma membrane 40.52 45.38
CDY28419 Canola mitochondrion, plasma membrane 39.07 45.23
CDX67411 Canola plasma membrane 33.09 45.21
CDY35293 Canola cytosol 36.91 44.36
CDY25853 Canola plasma membrane 47.11 43.77
CDY60204 Canola plasma membrane 47.11 43.77
CDX94701 Canola cytosol 32.16 43.7
CDY26316 Canola plasma membrane 45.67 43.56
CDX99850 Canola plasma membrane 45.57 43.46
CDY44292 Canola plasma membrane 43.71 42.91
CDY35284 Canola plasma membrane 44.54 42.44
CDY43187 Canola plasma membrane 43.61 42.22
CDX98146 Canola plasma membrane 43.51 42.2
CDX94692 Canola plasma membrane 43.2 42.15
CDY13695 Canola plasma membrane 43.92 41.68
CDX99848 Canola plasma membrane 43.61 41.51
CDX98148 Canola plasma membrane 43.3 41.3
CDX99849 Canola plasma membrane 42.89 41.23
CDY26317 Canola plasma membrane 42.99 41.16
CDY26319 Canola plasma membrane 43.09 41.14
CDX73325 Canola plasma membrane 41.44 40.44
CDY43185 Canola plasma membrane 42.68 38.58
CDY35292 Canola plasma membrane 42.89 37.11
CDY67674 Canola cytosol 27.42 36.09
CDY42407 Canola plasma membrane 38.35 36.01
CDY10509 Canola plasma membrane 37.94 35.83
CDY10508 Canola plasma membrane 38.14 35.82
CDY47811 Canola plasma membrane 37.32 35.66
CDX67736 Canola plasma membrane 36.6 35.36
CDX98288 Canola plasma membrane 36.6 35.36
CDY59119 Canola plasma membrane 36.6 35.36
CDY22357 Canola plasma membrane 36.91 35.27
CDY46490 Canola plasma membrane 36.6 34.94
CDY25239 Canola plasma membrane 32.99 34.63
CDY68250 Canola plasma membrane 36.19 34.55
CDY67675 Canola cytosol 4.33 32.56
CDY12693 Canola plasma membrane 33.3 32.2
CDX73324 Canola nucleus 0.93 29.03
CDY11604 Canola plasma membrane 19.07 28.95
CDY38804 Canola golgi, plasma membrane 18.97 28.8
CDX90205 Canola plasma membrane 44.95 24.84
CDY03757 Canola plasma membrane 37.53 17.82
CDY43003 Canola plasma membrane 37.32 17.25
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078EBU7
EnsemblPlants:CDX98497ProteinID:CDX98497ProteinID:CDX98497.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00106134001
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:MalectinPFAM:PF07714
PFAM:PF11721ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF11InterPro:Prot_kinase_dom
SMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelix
UniParc:UPI0004EF3B15SEG:seg::::
Description
BnaC05g38780D
Coordinates
chrLK031905:+:598317..604355
Molecular Weight (calculated)
106521.0 Da
IEP (calculated)
6.122
GRAVY (calculated)
-0.127
Length
970 amino acids
Sequence
(BLAST)
001: MMLVFSVAVD VLRAVAKELH QDNWDFSVDP CDVSSTVGGW RTLNTGNNFE NIGRDLNGSL PKEFAGLPFL ERIDLSRNFL SGSIPPEWGA LPLVNVSLLG
101: NRITGPIPKE IGNITSLVFL ALEFNQISGK LPPELGNQPN IRRLLLSSNN LSGDIPSTFS KLTTLTDFRI SDNQFTGTIP DLIQNWTELE KLVIQASGLV
201: GPIPSTIGSL TKLTDFGSES PFPPLQNMIS IKTLILRNCN LTGELPPYLG QMNKLTLIDL SFNKLSGPIP VEYRALSNIF TSNMLSGEVP TWMVDKGDKI
301: DLTYNDFTND LRTAECQKNA VNMFSSTSPL VANNHSNVSC LSSYKCPKTF YGLHINCGGA ELTINGTKYD SDTSNGAINY DTRYGWISSN TGCFLDDERS
401: PKGGTLWENK SELTIADPGL YTHARLSAIS LTYYAFCLGQ GSYTVNLHFA EIVFTGNQTF SSLGRRFFDV YVQGNLVVKD FNIVHEAKGV GRDVVRSFPV
501: MITDGKLEIR LFWAGKGTQG LPTRGVYGAL ISAVSVAPNF IAPKEAGTGS GGGSSIGTLV GAVVASTVFL VLLIGGILWW RGCLRPKSQM EKDFKNLDFQ
601: ISSFSLRQIK VATNNFDPAN KIGEGGFGPV HKGTLTDGTV MAVKQLSSKS RQGNREFLNE IAMISALQHP HLVKLYGCCV EGDQLLLVYE CLENNSLARA
701: LFGPQETQIR LDWPTRQKIC VGIARGLAYL HEESRLKIVH RDIKATNVLL DKELNAKISD FGLAKLDEEE NTHISTRVAG TYGYMAPEYA MKGHLTDKAD
801: VYSFGVVALE IVHGRSNTIA RSRVETLNLL DWVHVLREQN KLMEVVDPRL GTDYNREEAM TMILIGILCT SQVSSERPSM STVVSILEGS STVNVEKLLE
901: ASFNKGSEKD NESVRAMKKH YAMINEEEMN MLDQTISTDG PFTSSSTSTA NASDLYPLKP DSAYWNSRAV
Best Arabidopsis Sequence Match ( AT1G07650.1 )
(BLAST)
0001: MIYLHRIYFI IVLFTLIFHG RLGFSDNNKL HEAEVRALKE IGKKLGKKDW DFNKDPCSGE GTWIVTTYTT KGFESNITCD CSFLPQNSSC HVIRIALKSQ
0101: NLTGIVPPEF SKLRHLKVLD LSRNSLTGSI PKEWASMRLE DLSFMGNRLS GPFPKVLTRL TMLRNLSLEG NQFSGPIPPD IGQLVHLEKL HLPSNAFTGP
0201: LTEKLGLLKN LTDMRISDNN FTGPIPDFIS NWTRILKLQM HGCGLDGPIP SSISSLTSLT DLRISDLGGK PSSFPPLKNL ESIKTLILRK CKIIGPIPKY
0301: IGDLKKLKTL DLSFNLLSGE IPSSFENMKK ADFIYLTGNK LTGGVPNYFV ERNKNVDVSF NNFTDESSIP SHDCNRVTSN LVESFALGNK SHKGSTCFLQ
0401: RMPCVHPKRY HLYKLYINCG GGEVKVDKEI TYQADDEPKG ASMYVLGANK RWALSSTGNF MDNDDDADEY TVQNTSRLSV NASSPSFGLY RTARVSPLSL
0501: TYYGICLGNG NYTVNLHFAE IIFTDDNTLY SLGKRLFDIY VQDQLVIKNF NIQEAARGSG KPIIKSFLVN VTDHTLKIGL RWAGKGTTGI PIRGVYGPMI
0601: SAISVEPNFK PPVYYDTKDI ILKVGVPVAA ATLLLFIIVG VFWKKRRDKN DIDKELRGLD LQTGTFTLRQ IKAATDNFDV TRKIGEGGFG SVYKGELSEG
0701: KLIAVKQLSA KSRQGNREFV NEIGMISALQ HPNLVKLYGC CVEGNQLILV YEYLENNCLS RALFGKDESS RLKLDWSTRK KIFLGIAKGL TFLHEESRIK
0801: IVHRDIKASN VLLDKDLNAK ISDFGLAKLN DDGNTHISTR IAGTIGYMAP EYAMRGYLTE KADVYSFGVV ALEIVSGKSN TNFRPTEDFV YLLDWAYVLQ
0901: ERGSLLELVD PTLASDYSEE EAMLMLNVAL MCTNASPTLR PTMSQVVSLI EGKTAMQELL SDPSFSTVNP KLKALRNHFW QNELSRSLSF STSGPRTASA
1001: NSLVDAEEKT GLLD
Arabidopsis Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.