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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 6
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY35279 Canola plasma membrane 96.75 96.75
CDX99850 Canola plasma membrane 82.25 82.01
CDY26316 Canola plasma membrane 81.85 81.61
AT1G29750.2 Thale cress plasma membrane 82.05 81.49
CDY72653 Canola cytosol 14.89 60.89
KRH59039 Soybean plasma membrane 54.04 55.69
VIT_10s0003g01880.t01 Wine grape cytosol 52.66 55.51
PGSC0003DMT400073238 Potato cytosol, nucleus, plasma membrane 40.93 53.76
Solyc02g071880.2.1 Tomato plasma membrane 52.47 53.47
KRH21191 Soybean plasma membrane 52.86 52.76
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 29.68 51.37
CDX77648 Canola cytosol 21.89 51.03
CDX75790 Canola peroxisome 46.15 49.84
CDX97605 Canola plasma membrane 44.97 49.73
CDX94698 Canola plasma membrane 19.23 49.49
CDY49080 Canola cytosol 23.77 49.49
CDX82466 Canola plasma membrane 48.52 48.24
CDY20088 Canola plasma membrane 48.42 48.18
CDX75791 Canola plasma membrane 48.13 48.08
CDX82464 Canola plasma membrane 46.15 48.05
CDX75792 Canola plasma membrane 45.96 47.84
CDX98497 Canola cytosol, plasma membrane, plastid 45.76 47.84
CDY32338 Canola plasma membrane 48.52 47.81
CDX82465 Canola plasma membrane 47.44 47.39
CDY43183 Canola mitochondrion, plasma membrane 41.12 47.39
CDX98501 Canola plasma membrane 47.63 47.35
CDX97606 Canola plasma membrane 47.53 47.25
CDX94703 Canola plasma membrane 39.94 46.77
CDY35283 Canola cytosol, plasma membrane, plastid 29.39 46.64
CDY43181 Canola cytosol 28.9 46.36
CDY28419 Canola mitochondrion, plasma membrane 38.07 46.06
CDX95138 Canola plasma membrane 45.56 45.65
CDX93632 Canola plasma membrane 45.46 45.55
CDY44292 Canola plasma membrane 44.28 45.45
CDY43187 Canola plasma membrane 44.77 45.31
CDY13695 Canola plasma membrane 45.56 45.21
CDX98146 Canola plasma membrane 44.58 45.2
CDX99849 Canola plasma membrane 44.87 45.09
CDY26317 Canola plasma membrane 44.97 45.01
CDY35284 Canola plasma membrane 45.17 44.99
CDX99848 Canola plasma membrane 45.17 44.95
CDX67411 Canola plasma membrane 31.36 44.79
CDX94692 Canola plasma membrane 43.89 44.77
CDY35293 Canola cytosol 35.5 44.61
CDX94701 Canola cytosol 31.36 44.54
CDY60204 Canola plasma membrane 45.36 44.06
CDX98148 Canola plasma membrane 44.18 44.05
CDY25853 Canola plasma membrane 45.27 43.97
CDY26319 Canola plasma membrane 43.79 43.7
CDX81476 Canola cytosol 11.93 42.61
CDX97610 Canola plasma membrane 47.34 42.44
CDX73325 Canola plasma membrane 41.52 42.35
CDY43185 Canola plasma membrane 43.59 41.19
CDY35292 Canola plasma membrane 44.58 40.32
CDY67675 Canola cytosol 4.73 37.21
CDY59119 Canola plasma membrane 36.78 37.15
CDX67736 Canola plasma membrane 36.69 37.05
CDY10509 Canola plasma membrane 37.48 37.0
CDX98288 Canola plasma membrane 36.59 36.95
CDY67674 Canola cytosol 26.73 36.77
CDY47811 Canola plasma membrane 36.49 36.45
CDY22357 Canola plasma membrane 36.49 36.45
CDY42407 Canola plasma membrane 36.98 36.3
CDY10508 Canola plasma membrane 36.98 36.3
CDY25239 Canola plasma membrane 32.94 36.15
CDY46490 Canola plasma membrane 36.09 36.02
CDY68250 Canola plasma membrane 35.9 35.83
CDY12693 Canola plasma membrane 32.05 32.4
CDY38804 Canola golgi, plasma membrane 19.72 31.3
CDY11604 Canola plasma membrane 19.53 30.99
CDX90205 Canola plasma membrane 44.87 25.93
CDY03757 Canola plasma membrane 36.88 18.31
CDY43003 Canola plasma membrane 36.59 17.68
CDX73324 Canola nucleus 0.39 12.9
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078DSP3
EnsemblPlants:CDX90208ProteinID:CDX90208ProteinID:CDX90208.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00150765001InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sf
InterPro:Leu-rich_rptInterPro:MalectinPFAM:PF07714PFAM:PF11721PFAM:PF13855ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EE3B68:
Description
BnaA08g17760D
Coordinates
chrLK031862:-:656224..662228
Molecular Weight (calculated)
112378.0 Da
IEP (calculated)
6.664
GRAVY (calculated)
-0.178
Length
1014 amino acids
Sequence
(BLAST)
0001: MFADKKKKKD INIFVFSVFA IICFKSFSIN AIKLPQDEVD ALQQIATTLG SKYWKFDAES CTVEKVGLTE TPPPLAEQVI ECECSPTNDT DCHVVKIALK
0101: DHSLPGTLPP QITKLPKLRE IDLAYNYLNG TIPLEWFTTN LTLISLLVNR LSGEIPKELG NLTSLTFLNL ESNAFSGTIP QELGNLVNLG TLMLSSNNLT
0201: GNLPASLSKL QNMTDFRIND LQLNGTIPSY IQNWKELQRL EIVASGLTGP IPSVISVLNN LKNLRISDIG GPVQPFPYLR NSTEISKLVL KNCNLSGQIP
0301: DYLSNFKNLE TLDLSFNKLP GVIPSFAHAE KLRFLILTGN RLEGDVPPEL LRDGITVDVS YNNLKWQSSE SRSCRPNMNL NLNLFQSTST KESSKVLPCI
0401: DDFKCPRYSS CLHVNCGGSD LTLTQNKTKI LYQGDGEAEG GAAKYYLKHN AYWGFSSTGD YMDDNNFQNT RFTVFVPTSN LSDLYKTARI APVSLTYFHA
0501: CLENGKYTVN LDFAEMRFTN DETYNRLGRR VFDIYIQEKL VVKDFNIMEE AKGAQKPITK SFTVNVTNHF LAIRLSWAGK GTTRIPTRGV YGPLISAISI
0601: VSDSKPCASP GSGGMSLGAK IAIGLGSICL IIFILGVLWF FGCLPKCWQQ RKDPNEEELP SGTFTLRQIK FATDDFNPAN KIGEGGFGPV FKGVLSDGRV
0701: VAVKQLSSKS RQGNREFLNE IGAISCLQHP NLVKLHGFCV ERSQLLLVYE YMENNSLAQA LFSPKHKQIP LDWPTRFKIC CGIAKGLAFL HEESPLKFVH
0801: RDIKATNILL DKDLTPKISD FGLARLDEEE NTHVSTKVAG TIGYMAPEYA LWGYLSFKAD VYSYGVLVLE IVAGINNSSF MAAGDEVCLL EWAMGCEESG
0901: DLMQVVDERL RPEVDKKEAE TLIKVALVCT SASASDRPIM SEVVGMLEGH YPVPEPIPGT SRKSGDIRFK AFKDVRKGME ENSSKTQFSL NSYPSSSSDT
1001: HVAGQERKQD ESGT
Best Arabidopsis Sequence Match ( AT1G29750.2 )
(BLAST)
0001: MISLYQILAE KKKKKKNDLN IFAFSVFAII CFKFYSVNAI KLPQQEVDAL QQIATTLGSK FWKFDAENCK IEMVGLTETP PPTAKQEIEC ECSPTNDTDC
0101: HVVKFAFKDH NLPGTLPQIV KLPYLREIDL AYNYINGTLP REWASSNLTF ISLLVNRLSG EIPKEFGNSS LTYLDLESNA FSGTIPQELG NLVHLKKLLL
0201: SSNKLTGTLP ASLARLQNMT DFRINDLQLS GTIPSYIQNW KQLERLEMIA SGLTGPIPSV ISVLSNLVNL RISDIRGPVQ PFPSLKNVTG LTKIILKNCN
0301: ISGQIPTYLS HLKELETLDL SFNKLVGGIP SFAQAENLRF IILAGNMLEG DAPDELLRDG ITVDLSYNNL KWQSPESRAC RPNMNLNLNL FQSTSTKKSS
0401: KFLPCIKDFK CPRYSSCLHV NCGGSDMYVK EKKTKELYEG DGNVEGGAAK YFLKPDANWG FSSTGDFMDD NNFQNTRFTM FVPASNQSDL YKSARIAPVS
0501: LTYFHACLEN GNYTINLDFA EIRFTNDENY NRLGRRLFDI YIQEKLVAKD FNIMDEAKGA QTPIIKPLTA YVTNHFLTIR LSWAGKGTTR IPTRGVYGPI
0601: ISAISIVSDS KPCERPKTGM SPGAYIAIGI GAPCLIIFIL GFLWICGCLP RCGRQRKDPY EEELPSGTFT LRQIKFATDD FNPTNKIGEG GFGAVFKGVL
0701: ADGRVVAVKQ LSSKSRQGNR EFLNEIGAIS CLQHPNLVKL HGFCVERAQL LLAYEYMENN SLSSALFSPK HKQIPMDWPT RFKICCGIAK GLAFLHEESP
0801: LKFVHRDIKA TNILLDKDLT PKISDFGLAR LDEEEKTHIS TKVAGTIGYM APEYALWGYL TFKADVYSFG VLVLEIVAGI TNSNFMGAGD SVCLLEFANE
0901: CVESGHLMQV VDERLRPEVD RKEAEAVIKV ALVCSSASPT DRPLMSEVVA MLEGLYPVPE STPGVSRNAG DIRFKAFKDL RRGMENNSKT QCSVKSYPSS
1001: SSTSSGAGQA VQERKKEESR P
Arabidopsis Description
RKF1Probable LRR receptor-like serine/threonine-protein kinase RFK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXF2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.