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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • golgi 5
  • plasma membrane 8
  • endoplasmic reticulum 5
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43187 Canola plasma membrane 90.7 90.52
CDX77648 Canola cytosol 38.6 88.74
CDX98148 Canola plasma membrane 90.2 88.69
CDY43185 Canola plasma membrane 93.3 86.95
AT1G29730.2 Thale cress plasma membrane 82.6 82.52
AT1G29740.1 Thale cress plasma membrane 86.7 80.43
CDY72653 Canola cytosol 16.5 66.53
CDX94698 Canola plasma membrane 22.8 57.87
CDY35284 Canola plasma membrane 58.2 57.17
CDY44292 Canola plasma membrane 56.4 57.09
CDY43183 Canola mitochondrion, plasma membrane 49.9 56.7
CDX99848 Canola plasma membrane 57.0 55.94
CDX94703 Canola plasma membrane 48.3 55.77
CDY35283 Canola cytosol, plasma membrane, plastid 35.6 55.71
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 26.2 55.63
CDX94692 Canola plasma membrane 55.1 55.43
CDY35293 Canola cytosol 44.7 55.39
CDY49080 Canola cytosol 26.9 55.24
CDX99849 Canola plasma membrane 55.7 55.2
CDY13695 Canola plasma membrane 56.4 55.19
CDX67411 Canola plasma membrane 39.1 55.07
CDY67675 Canola cytosol 7.1 55.04
CDY26319 Canola plasma membrane 55.8 54.92
CDX94701 Canola cytosol 39.2 54.9
CDY26317 Canola plasma membrane 55.4 54.69
CDY43181 Canola cytosol 34.4 54.43
CDY28419 Canola mitochondrion, plasma membrane 45.1 53.82
VIT_10s0003g01990.t01 Wine grape plasma membrane 46.9 51.09
CDY35292 Canola plasma membrane 56.6 50.49
CDX73325 Canola plasma membrane 48.3 48.59
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 28.3 48.29
CDX75790 Canola peroxisome 43.9 46.75
CDX81476 Canola cytosol 13.2 46.48
CDX93632 Canola plasma membrane 46.5 45.95
CDX95138 Canola plasma membrane 46.5 45.95
CDY67674 Canola cytosol 33.8 45.86
CDX97605 Canola plasma membrane 41.4 45.15
CDY35279 Canola plasma membrane 45.2 44.58
CDX90208 Canola plasma membrane 45.2 44.58
CDX82465 Canola plasma membrane 45.1 44.43
CDX82466 Canola plasma membrane 45.3 44.41
CDX82464 Canola plasma membrane 43.2 44.35
CDY20088 Canola plasma membrane 45.1 44.26
CDX75792 Canola plasma membrane 43.1 44.25
CDX75791 Canola plasma membrane 44.9 44.24
CDX97606 Canola plasma membrane 44.5 43.63
CDX98497 Canola cytosol, plasma membrane, plastid 42.2 43.51
CDX98501 Canola plasma membrane 44.3 43.43
CDY32338 Canola plasma membrane 44.5 43.25
CDY26316 Canola plasma membrane 43.6 42.87
CDY25853 Canola plasma membrane 44.7 42.82
CDX99850 Canola plasma membrane 43.5 42.77
CDY60204 Canola plasma membrane 44.5 42.62
CDX97610 Canola plasma membrane 43.7 38.64
CDY25239 Canola plasma membrane 33.3 36.04
CDY22357 Canola plasma membrane 36.3 35.76
CDY47811 Canola plasma membrane 36.2 35.66
CDY42407 Canola plasma membrane 36.8 35.62
CDY59119 Canola plasma membrane 35.7 35.56
CDY46490 Canola plasma membrane 36.1 35.53
CDX67736 Canola plasma membrane 35.6 35.46
CDX98288 Canola plasma membrane 35.6 35.46
CDY10509 Canola plasma membrane 36.2 35.25
CDY68250 Canola plasma membrane 35.8 35.24
CDY10508 Canola plasma membrane 36.3 35.14
CDY12693 Canola plasma membrane 33.3 33.2
CDX90205 Canola plasma membrane 57.7 32.88
CDX73324 Canola nucleus 1.0 32.26
CDY38804 Canola golgi, plasma membrane 18.9 29.58
CDY11604 Canola plasma membrane 18.6 29.11
CDY03757 Canola plasma membrane 35.8 17.52
CDY43003 Canola plasma membrane 36.4 17.35
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078EAE4
EnsemblPlants:CDX98146ProteinID:CDX98146ProteinID:CDX98146.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00105548001
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:MalectinPFAM:PF00069
PFAM:PF11721ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF55
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDFF65SEG:seg::
Description
BnaC07g09520D
Coordinates
chrLK031903:-:42926..48268
Molecular Weight (calculated)
111278.0 Da
IEP (calculated)
6.828
GRAVY (calculated)
-0.131
Length
1000 amino acids
Sequence
(BLAST)
001: MVMSQRCLFS SLLSVLTLIY LVCTDTASPS LHPDEVEALK DIASTLGVKH LNLSEDPCLT KTLVITQYVL KEGQNSTIRC DCRFNNNNTC HITHFIIKTF
101: SLPGRLPPEL SKLQYLKLID LCRNYLNGSI PMEWASLPYL TSISVCANRL SGGIPKGLGK FINLTKLDLE ANQFSGTIPI ELGNLVNLEG LVLSSNQLVG
201: GIPKTIARLK NLTNLRFSDN RLNGSIPELM GTLAKLQRLE LYASGLTEPI PDFIFQLENL FDLRISDTTL GQFPHITSKN LKYLVLRNMN LTGPIPTTIW
301: DLPYLMTLDL SFNRLTGEIP ADATAPKYTY LAGNMLSGKV ESGPFLTAST NIDLSYNNFT WSPSCRERTN VNTYESSSSR NRLTRLLPCS AINQCKNYSK
401: SLHINCGGPD VTIENSRGRF LYEGDNSGRT GSAMNYHGKN WGFSNTGDFM DDIITEDTYS VSSESPVSAK YPELYQTARR SPLSLAYFAF CFENGSYNVK
501: LHFAEIQFSD EEPYARLATR FFNIYVQGKL VWEDFNIREE ANGTHKEVIK EVNTTVTDNT LEIRLYWAGK GTTIIPKRGN YGSLISAISV CPSYESECGA
601: QVHPLLVRKA HKPRIYPLIL VITALILSLA FLIFGAFYWK KCVRNEDSGK RGSFSLKQLK VATDNFDPLN KIGEGGFGSV YKGQLPDGTL IAVKKLSSKS
701: CQGNKEFVNE IGMIACLQHP NLVKLYGCCC ENNQLLLVYE YLENNCLADA LFGRSGLKLE WGTRQKICLG IARGLAFLHE DSAVKIIHRD IKGTNVLLDK
801: DLNSKISDFG LARLHEDEKS HITTKVAGTI GYMAPEYVMR GHLTEKADVY SFGVVAMEIV SGKSNANYTP DNECCVGLLD WAFVLQKKGA FSEILDPKLE
901: GVFDVMEAER MIKVSLLCSN KSPTLRPTMS EVVKMLEGET EIEQIIADPG VYGDELRFKR FSEIGTSSLP SDYLVSIPSS CESAYDLYPL SPESTVFSRP
Best Arabidopsis Sequence Match ( AT1G29740.2 )
(BLAST)
0001: MSAAYKLMIM SRSRLFSSLL SVLTLIYLVC TVLSASPSLH PDEVEALKDI ALTLGVKHLN LSEDPCLTKT LVITQDVLKE GQNSTIRCDC HFNNNNTCHI
0101: THFVLKTFSL PGRLPPEFSK LRYLEFIDLC RNYLYGSIPM EWASLPYLKS ISVCANRLTG DIPKGLGKFI NLTQLGLEAN QFSGTIPKEL GNLVNLEGLA
0201: FSSNQLVGGV PKTLARLKKL TNLRFSDNRL NGSIPEFIGN LSKLQRLELY ASGLKDPIPY SIFRLENLID LRISDTAAGL GQVPLITSKS LKFLVLRNMN
0301: LTGPIPTSLW DLPNLMTLDL SFNRLTGEVP ADASAPKYTY LAGNMLSGKV ESGPFLTAST NIDLSYNNFT WSQSCKERNN INTYASSRST NSLTRLLPCS
0401: AINLCQNYNR SLHINCGGPD VTIENSRGRF LYEGDNYGLT GSATNYYGKN WGFSNTGDFM DDAITEDTYT VSSESAVSAK YPDLYQNARR SPLSLAYFAI
0501: CFENGSYNVK LHFAEIQFSD EEPFSRLAKR VFNIYVQGKL IWEDFSIREE ANGTHKEVIK EVNTTVTDNT LEIRLYWAGK GTTIIPKRGN YGSLISAISV
0601: CPSSESECGV PVQIHPVTKQ QHKQRKYHLI LGIAALIVSL SFLILGALYW RICVSNADGE KRGSFSLRQL KVATDDFNPL NKIGEGGFGS VYKGRLPNGT
0701: LIAVKKLSSK SCQGNKEFIN EIGIIACLQH PNLVKLYGCC VEKTQLLLVY EYLENNCLAD ALFGRSGLKL DWRTRHKICL GIARGLAFLH EDSAVKIIHR
0801: DIKGTNILLD KDLNSKISDF GLARLHEDDQ SHITTRVAGT IGYMAPEYAM RGHLTEKADV YSFGVVAMEI VSGKSNANYT PDNECCVGLL DWAFVLQKKG
0901: AFDEILDPKL EGVFDVMEAE RMIKVSLLCS SKSPTLRPTM SEVVKMLEGE TEIEEIISDP GAYGDELRFK KTAEIGSSSL PSDYLVSITS SCESAYDLYP
1001: LSPESVVFSR P
Arabidopsis Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I337]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.