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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 6
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030170.1-P Field mustard plasma membrane 62.06 87.34
Bra030174.1-P Field mustard plasma membrane 76.99 86.82
CDX98146 Canola plasma membrane 80.43 86.7
CDY43187 Canola plasma membrane 80.43 86.53
CDX98148 Canola plasma membrane 80.8 85.64
CDX77648 Canola cytosol 34.51 85.52
AT1G29730.2 Thale cress plasma membrane 79.41 85.51
CDY43185 Canola plasma membrane 77.74 78.1
Bra030169.1-P Field mustard plastid 44.99 75.55
AT1G29720.1 Thale cress plasma membrane 53.71 56.82
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 24.03 54.99
VIT_10s0003g01990.t01 Wine grape plasma membrane 43.14 50.65
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 26.44 48.63
AT1G53420.1 Thale cress plasma membrane 40.26 45.54
AT1G07650.2 Thale cress plasma membrane 42.21 44.61
AT3G14840.2 Thale cress plasma membrane 42.02 44.41
AT1G29750.2 Thale cress plasma membrane 42.02 44.37
AT1G53430.1 Thale cress plasma membrane 40.72 42.29
AT1G53440.1 Thale cress plasma membrane 39.98 41.64
AT1G56140.1 Thale cress plasma membrane 34.04 35.53
AT1G56130.2 Thale cress plasma membrane 33.86 35.37
KRH75936 Soybean extracellular 2.69 35.37
AT1G56120.1 Thale cress cytosol 33.4 34.38
AT1G56145.2 Thale cress plasma membrane 32.47 33.69
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:839852
ProteinID:AEE31123.1ArrayExpress:AT1G29740EnsemblPlantsGene:AT1G29740RefSeq:AT1G29740TAIR:AT1G29740RefSeq:AT1G29740-TAIR-G
EnsemblPlants:AT1G29740.1TAIR:AT1G29740.1Unigene:At.51828UniProt:F4I337GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Malectin
RefSeq:NP_174267.4PFAM:PF00069PFAM:PF11721ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0001A7B1B5SEG:seg:
Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I337]
Coordinates
chr1:-:10407379..10412997
Molecular Weight (calculated)
120060.0 Da
IEP (calculated)
6.936
GRAVY (calculated)
-0.157
Length
1078 amino acids
Sequence
(BLAST)
0001: MSAAYKLMIM SRSRLFSSLL SVLTLIYLVC TVLSASPSLH PDEVEALKDI ALTLGVKHLN LSEDPCLTKT LVITQDVLKE GQNSTIRCDC HFNNNNTCHI
0101: THFVLKTFSL PGRLPPEFSK LRYLEFIDLC RNYLYGSIPM EWASLPYLKS ISVCANRLTG DIPKGLGKFI NLTQLGLEAN QFSGTIPKEL GNLVNLEGLA
0201: FSSNQLVGGV PKTLARLKKL TNLRFSDNRL NGSIPEFIGN LSKLQRLELY ASGLKDPIPY SIFRLENLID LRISDTAAGL GQVPLITSKS LKFLVLRNMN
0301: LTGPIPTSLW DLPNLMTLDL SFNRLTGEVP ADASAPKYTY LAGNMLSGKV ESGPFLTAST NIDLSYNNFT WSQSCKERNN INTYASSRST NSLTRLLPCS
0401: AINLCQNYNR SLHINCGGPD VTIENSRGRF LYEGDNYGLT GSATNYYGKN WGFSNTGDFM DDAITEDTYT VSSESAVSAK YPDLYQNARR SPLSLAYFAI
0501: CFENGSYNVK LHFAEIQFSD EEPFSRLAKR VFNIYVQGKL IWEDFSIREE ANGTHKEVIK EVNTTVTDNT LEIRLYWAGK GTTIIPKRGN YGSLISAISV
0601: CPSSESECGV PVQIHPVTKQ QHKQRKYHLI LGIAALIVSL SFLILGALYW RICVSNADGE KRGSFSLRQL KVATDDFNPL NKIGEGGFGS VYKGRLPNGT
0701: LIAVKKLSSK SCQGNKEFIN EIGIIACLQH PNLVKLYGCC VEKTQLLLVY EYLENNCLAD ALFGRSGLKL DWRTRHKICL GIARGLAFLH EDSAVKIIHR
0801: DIKGTNILLD KDLNSKISDF GLARLHEDDQ SHITTRVAGT IGYMAPEYAM RGHLTEKADV YSFGVVAMEI VSGKSNANYT PDNECCVGLL DWAFVLQKKG
0901: AFDEILDPKL EGVFDVMEAE RMIKVSLLCS SKSPTLRPTM SEVVKMLEGE TEIEEIISDP GAYGDELRFK KTAEIGSSSL PSDYLVSITS SCESAYDLYP
1001: LSPDQLCRRY HPLRRKEHHD DTSRWLRPEL DNGAYIAALL LPQRDDFEVC DSVIFWLSSI ISGQREIRQI ADIKNSDD
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.