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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • nucleus 1
  • mitochondrion 2
  • plasma membrane 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030174.1-P Field mustard plasma membrane 90.86 72.8
CDY43187 Canola plasma membrane 92.69 70.86
CDX98148 Canola plasma membrane 93.6 70.5
Bra030169.1-P Field mustard plastid 55.87 66.67
AT1G29730.2 Thale cress plasma membrane 83.03 63.54
AT1G29740.1 Thale cress plasma membrane 87.34 62.06
Bra030166.1-P Field mustard plasma membrane 46.08 48.69
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 29.24 47.56
Bra030161.1-P Field mustard plasma membrane 43.99 47.2
Bra034418.1-P Field mustard cytosol, plasma membrane, plastid 30.94 46.93
Bra028415.1-P Field mustard cytosol, plasma membrane, plastid 30.16 46.86
Bra032331.1-P Field mustard cytosol 43.21 46.75
Bra030168.1-P Field mustard mitochondrion, plasma membrane 49.09 44.71
Bra010817.1-P Field mustard plasma membrane 43.99 44.46
Bra010816.1-P Field mustard plasma membrane 44.65 44.24
Bra032332.1-P Field mustard plasma membrane 53.39 42.87
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 31.46 41.13
Bra030167.1-P Field mustard plasma membrane 51.04 40.14
VIT_10s0003g01990.t01 Wine grape plasma membrane 46.08 38.45
Bra018693.1-P Field mustard plasma membrane 44.39 34.0
Bra027306.1-P Field mustard plasma membrane 39.16 33.59
Bra032333.1-P Field mustard plasma membrane 35.25 33.21
Bra001566.1-P Field mustard plasma membrane 42.3 32.89
Bra021579.1-P Field mustard plasma membrane 43.21 32.48
Bra027307.1-P Field mustard plasma membrane 42.17 31.95
Bra007908.1-P Field mustard cytosol 29.11 31.95
Bra001567.1-P Field mustard plasma membrane 42.17 31.82
Bra038124.1-P Field mustard plasma membrane 42.17 31.7
Bra030815.1-P Field mustard plasma membrane 36.03 26.93
Bra003333.1-P Field mustard plasma membrane 34.99 26.69
Bra030813.1-P Field mustard plasma membrane 36.55 26.67
Bra007909.1-P Field mustard plasma membrane 35.12 26.55
Bra033670.1-P Field mustard plasma membrane 34.86 26.31
Bra007907.1-P Field mustard plasma membrane 34.99 26.1
Bra035966.1-P Field mustard plasma membrane 34.6 26.08
Bra033958.1-P Field mustard plasma membrane 32.77 25.59
Bra016226.1-P Field mustard plasma membrane 15.27 21.2
Protein Annotations
Gene3D:1.10.510.10Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10MapMan:50.2.7EnsemblPlantsGene:Bra030170
EnsemblPlants:Bra030170.1EnsemblPlants:Bra030170.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfUniProt:M4EN00
InterPro:MalectinPFAM:PF00069PFAM:PF07714PFAM:PF11721ScanProsite:PS00107PFscan:PS50011
PANTHER:PTHR27006PANTHER:PTHR27006:SF92InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002540FBESEG:seg:
Description
AT1G29740 (E=1e-183) | kinase
Coordinates
chrA07:+:5970492..5976005
Molecular Weight (calculated)
84721.5 Da
IEP (calculated)
5.465
GRAVY (calculated)
-0.107
Length
766 amino acids
Sequence
(BLAST)
001: MSSAYKLMIM SQSRHFSSLL TVFICICLTC TVSASPSLHP DEVKALKDIA STLGVRHLNL SEDPCLTKTL VITQDVLKEG HNSTIKCDCH FNNNKTCHIT
101: HLILEANQFS GIIPKELGNL VNLEGLELYA SGLREPIPDS IFRLENLFDL VLRNLNLTGP IPTTIWDLPN LMTLDLSFNR LTGEIPADAA APKYTYLAGN
201: MLSGKIESGP FLTASTNITR LLPCSAISQC QNYSKSLHIN CGGPDVTIEN SRGRFLYEGD NSGRTGSATN YHGKNWGFSN TGDFMDDAIT EDTYSVSSDS
301: TVSAKYPELY QTARRSPLSL AYFAFCFENG SYNVKLHFAE IQFSDEEPYA RLATRFFNIY VQGKLVWEDF NIREEANGTH KEVIKEVNTT VTDNTLEIRL
401: YWAGKGTTII PKRGNYGSLI SAISVCPSSE SECGVEVKTP PVTKEPKPRT YPLILGITAL ILSLAFLIFC ALYWKKCVRN AEAGKRGSFS LKQLKVATDN
501: FDPLNKIGEG GFGSVYKGRL PDGTLIAVKK LSSKSCQGNK EFVNEIGMIA CLQHPNLVKL YGCCCENNQL LLVYEYLENN CLADALFGKV LTMKLEGYMA
601: PEYAMRGHLT EKADVYSFGV VAMEIVSGKS NANYTPDNEC CVGLLDWAFV LQKKGAFSEI LDPKLEGVFD VMEAERMIKV SLLCSNKSPT LRPTMSEVVK
701: MLEGETEIEQ IIADPGVYGD ELRFKRFSEI GTSSLPSDYL VSIPSSCESA YDLYPLSPES TVFSRP
Best Arabidopsis Sequence Match ( AT1G29730.3 )
(BLAST)
001: MSAAYNLMIK SKSCLFSSSI LFVVTLIYLL CTVSASPSLH PDEVEALKDI TETLGVKHLN LSEDPCLTKT LVISQGVLKE GQNSTIRCDC HFNNYSTCHI
101: KHFVLQKFNL PGRLPPMLYK FRHLESIDLY NNYLYGSIPM EWASLPYLKS ISVCANRLSG DIPKGLGKFI NLTLLVLEAN QFSGTIPKEL GNLVNLQGLG
201: LSSNQLVGGL PKTLAKLTKL TNLHLSDNRL NGSIPEFIGK LPKLQRLELY ASGLRGPIPD SIFHLENLID VRISDTVAGL GHVPQITSTS LKYLVLRNIN
301: LSGPIPTSIW DLPSLMTLDL SFNRLTGEIP AYATAPKYTY LAGNMLSGKV ETGAFLTAST NIDLSYNNFT WSPMCKERKN INTYESSHSK NRLTRLLPCS
401: AIKQCQNYSR SLHINCGGPD VTIENSRGRF LYEGDNYGLT GSATNYYRKN WGYSNTGDFM DDAITEDTYT VSSESAVSAK YPDLYQNARR SPLSLAYYAF
501: CFENGSYNVK LHFAEIQFSD VEPYTKLAKR VFNIYIQGKL IWEDFSIREE ANGTHKEVIR EVNTTVTDNT LEIRLYWAGK GTMIIPQRGY YGSLISAVSV
601: CPSSESECGV PVQFLPVKKD HKPTKYPLIL GLTLSLAFLL LAAFCWRKCV SNANAAERGS FSLRQLKVAT NDFDPLNKIG EGGFGSVYKG RLPDGTLIAV
701: KKLSSKSHQG NKEFVNEIGM IACLQHPNLV KLYGCCVEKN QLLLVYEYLE NNCLSDALFG RSCLKLEWGT RHKICLGIAR GLAFLHEDSA VKIIHRDIKG
801: TNVLLDKDLN SKISDFGLAR LHEDNQSHIT TRVAGTIGYM APEYAMRGHL TEKADVYSFG VVAMEIVSGK SNAKYTPDDE CCVGLLDWFS ISGICVAKER
901: GYRGNSGSEA GRNVRCDGGR ENDKGFTFMR QQVFDITAKH VASCEDA
Arabidopsis Description
Leucine-rich repeat transmembrane protein kinase [Source:TAIR;Acc:AT1G29730]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.