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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034418.1-P Field mustard cytosol, plasma membrane, plastid 52.24 78.42
Bra028415.1-P Field mustard cytosol, plasma membrane, plastid 48.55 74.64
Bra032331.1-P Field mustard cytosol 61.87 66.24
Bra030166.1-P Field mustard plasma membrane 62.53 65.38
Bra010816.1-P Field mustard plasma membrane 65.7 64.42
Bra030161.1-P Field mustard plasma membrane 59.1 62.75
Bra030168.1-P Field mustard mitochondrion, plasma membrane 69.53 62.66
Bra032332.1-P Field mustard plasma membrane 74.01 58.8
AT1G29720.1 Thale cress plasma membrane 75.07 55.84
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 33.25 53.5
Bra030167.1-P Field mustard plasma membrane 68.34 53.18
Bra030169.1-P Field mustard plastid 42.35 50.0
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 36.15 46.76
Bra030170.1-P Field mustard plasma membrane 44.46 43.99
CDX90205 Canola plasma membrane 95.38 41.2
Bra030174.1-P Field mustard plasma membrane 51.58 40.9
VIT_10s0003g01990.t01 Wine grape plasma membrane 48.28 39.87
Bra032333.1-P Field mustard plasma membrane 39.31 36.65
Bra027306.1-P Field mustard plasma membrane 42.61 36.17
Bra007908.1-P Field mustard cytosol 32.72 35.53
Bra001566.1-P Field mustard plasma membrane 44.59 34.31
Bra018693.1-P Field mustard plasma membrane 44.99 34.1
Bra027307.1-P Field mustard plasma membrane 44.59 33.43
Bra021579.1-P Field mustard plasma membrane 44.72 33.27
Bra001567.1-P Field mustard plasma membrane 44.06 32.91
Bra038124.1-P Field mustard plasma membrane 44.2 32.88
Bra030815.1-P Field mustard plasma membrane 37.86 28.0
Bra033670.1-P Field mustard plasma membrane 36.68 27.39
Bra030813.1-P Field mustard plasma membrane 37.86 27.33
Bra003333.1-P Field mustard plasma membrane 36.15 27.29
Bra007909.1-P Field mustard plasma membrane 36.41 27.25
Bra035966.1-P Field mustard plasma membrane 36.28 27.07
Bra007907.1-P Field mustard plasma membrane 35.36 26.1
Bra033958.1-P Field mustard plasma membrane 32.98 25.48
Bra016226.1-P Field mustard plasma membrane 10.82 14.86
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10EnsemblPlantsGene:Bra010817
EnsemblPlants:Bra010817.1EnsemblPlants:Bra010817.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfUniProt:M4D2W4
InterPro:MalectinPFAM:PF00069PFAM:PF11721ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00025470DFSEG:seg
Description
AT1G29720 (E=2e-241) | protein kinase family protein
Coordinates
chrA08:+:16610869..16619432
Molecular Weight (calculated)
84315.7 Da
IEP (calculated)
8.309
GRAVY (calculated)
-0.119
Length
758 amino acids
Sequence
(BLAST)
001: MWIVFFFFII ITSFFATLTT STSPALHPDE LCFNFDKCRS LVNLTLVGKV PPELAKLRHL RSIGIEGNQF SGTIPDELGN LTKLVKLDLA SNQFTGSLPI
101: TLARLVNLEQ LILRNVGLSG PIPSYIWNLP NLTRLTGLLR AGPVNCKTYQ RSVHINCGGE DLKITNSFGK ITYQADNSKT NAATNHHQQN WGISNTGDFT
201: DDAYVDDTFI ISTSLRLSKD SPYLYKTARR SALSLVYYAF CLENGAYNVK LHFMEIQFSE KEVYSRIGRR IFDVYVQGKL FLRDFNIKEE ANGTLKPVVK
301: ELKANVTDHL LEIRLYWAGK GTALIPNRGN YGPLISAISL CHTEKIKHHI SFPLILGATG VLVTITLLAV GIYARRRCLK DSNTIKRDLR AEGLQTVCFT
401: WRQLQDATNN FDKANKLGEG GFGSVFKGEL PDGTIIAVKQ LSSKSCQGNR EFVNEIGMIS GLNHPNLVKL YGCCVEKNHL MLVYEYMKNN SLALVLSGKS
501: SMKLDWKTRQ KICVGIARGL EFLHEGSMIR MVHRDIKTPN VLLDADLNAK ISDFGLARLH EEEHTHISTK VAGTMGYMAP EYVLWGQLTE KADVYSFGVV
601: AMEIVSGKSN TKHKGTADHL SLLDWALSLH QKGNILEVVD PVLEGHFNRK EAVRMINVAL VCTNSSPALR PTMSEAMKML EGVIELTQVS SDPGIYGDDW
701: SLLKLRDIDD THGSSSTSGV TDQTRTTTKS SVSGCDLYPL YPESMTLNST VEYHSSSL
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.