Factsheet for Bra030168.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 2
plasma membrane 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43183	Canola	mitochondrion, plasma membrane	96.67	92.39
Bra034418.1-P	Field mustard	cytosol, plasma membrane, plastid	46.73	77.82
Bra028415.1-P	Field mustard	cytosol, plasma membrane, plastid	43.64	74.44
Bra030166.1-P	Field mustard	plasma membrane	63.38	73.52
Bra010817.1-P	Field mustard	plasma membrane	62.66	69.53
Bra032331.1-P	Field mustard	cytosol	58.26	69.21
Bra010816.1-P	Field mustard	plasma membrane	63.02	68.56
Bra032332.1-P	Field mustard	plasma membrane	70.99	62.58
Bra030161.1-P	Field mustard	plasma membrane	53.03	62.47
AT1G29720.1	Thale cress	plasma membrane	75.39	62.22
Bra030167.1-P	Field mustard	plasma membrane	65.87	56.88
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	31.27	55.84
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	34.72	49.83
Bra030169.1-P	Field mustard	plastid	37.93	49.69
Bra030170.1-P	Field mustard	plasma membrane	44.71	49.09
Bra030174.1-P	Field mustard	plasma membrane	53.15	46.76
VIT_10s0003g01990.t01	Wine grape	plasma membrane	48.87	44.77
Bra018693.1-P	Field mustard	plasma membrane	47.92	40.3
Bra007908.1-P	Field mustard	cytosol	32.22	38.83
Bra032333.1-P	Field mustard	plasma membrane	37.1	38.38
Bra027306.1-P	Field mustard	plasma membrane	40.67	38.3
Bra027307.1-P	Field mustard	plasma membrane	45.42	37.78
Bra001566.1-P	Field mustard	plasma membrane	43.88	37.46
Bra038124.1-P	Field mustard	plasma membrane	45.3	37.39
Bra021579.1-P	Field mustard	plasma membrane	45.3	37.39
Bra001567.1-P	Field mustard	plasma membrane	44.59	36.95
Bra003333.1-P	Field mustard	plasma membrane	37.93	31.77
Bra007909.1-P	Field mustard	plasma membrane	38.17	31.69
Bra030815.1-P	Field mustard	plasma membrane	37.57	30.83
Bra030813.1-P	Field mustard	plasma membrane	38.41	30.76
Bra035966.1-P	Field mustard	plasma membrane	37.1	30.71
Bra007907.1-P	Field mustard	plasma membrane	37.46	30.67
Bra033670.1-P	Field mustard	plasma membrane	36.98	30.64
Bra033958.1-P	Field mustard	plasma membrane	34.36	29.46
Bra016226.1-P	Field mustard	plasma membrane	14.15	21.56

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra030168
EnsemblPlants:Bra030168.1	EnsemblPlants:Bra030168.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M4EMZ8	InterPro:Malectin	PFAM:PF07714
PFAM:PF11721	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF54	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002540FC0	SEG:seg	:

Description

AT1G29720 (E=7e-212) | protein kinase family protein

Coordinates

chrA07:+:5999977..6005141

Molecular Weight (calculated)

93220.9 Da

IEP (calculated)

7.536

GRAVY (calculated)

-0.172

Length

841 amino acids

Sequence
(BLAST)

001: MRVCSLLCRT LVRNYLSGTI PVEWASMPYI TSIKLSANNL SGPLPTWLQN FKNLKILGIE GNQFSGTIPD ELGNLTNLTK LHLASNKFIG RLPVTLARLV
101: NLEELFLHAS GLKGPLPEAV ARLENLVDLI LRNVGLSGSV PSYIWNMSKL NRLDLSFNKL TGELQEVQQA PPHTYLTNNM LSGNVESASV YLHSKSVIDL
201: SYNNFSWSSS SRDKRLLPCA GPTNCSKYQR SLHINCGGRN VQIKTTSGKI TYQADNSTID AATNHHLENW GISNTGDFTD DIGHDDTYIV STNLTPSGDY
301: PDLYKTARRS PLSLVYYAFC LENGAYNVKL HFVEIQFLDE ELNCRLGRRI FDVYVQGELF LRDFNIKEEA NGTLKPVVKV AKAVNVTDHT LEIRLYWAGK
401: GTVLFPKRGN YGPLISAISL CHSKNTSPMP MEKTKYTYYP LIFGVTGALV AIILLALGLY AQKRCRGDTN MRERDLRAQC LQTVWFTWRQ LQAATNNFDQ
501: ANKLGEGGFG SVFKGELTDG TIVAVKQLSS KSRQGNREFV NEIGMISGLN HPNLVKLYGC CVEKNQLLLV YEYMENNSLA LVLSEKSSPK LDWAARKKIS
601: VGIARGLEFL HEGSMIKMVH RDIKTTNVLL DGNLNAKISD FGLARLREEE HTQITTKIAG TMGYMAPEYV LWGQLTEKAD VYSFGVVAME IVSGKSNTKP
701: RGSADHVSLI NWALMLQQKG DILEIVDPTL EGDFNSKEAV RMINVALVCT NSSPSLRPTM SEVVQMLEGV IEIAQVMADP GLYGDDWSMS KLKDNDTHGS
801: SSMSGVTDQT TMTMKFSVSG SDIYPESVIS NSTVEFPSSS V

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.