CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 2
mitochondrion 4
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030168.1-P	Field mustard	mitochondrion, plasma membrane	92.39	96.67
CDX94703	Canola	plasma membrane	95.11	96.65
CDY72653	Canola	cytosol	23.86	84.68
CDY35283	Canola	cytosol, plasma membrane, plastid	55.68	76.68
CDX94698	Canola	plasma membrane	34.32	76.65
CDY35293	Canola	cytosol	68.64	74.85
CDY43181	Canola	cytosol	52.95	73.73
CDY49080	Canola	cytosol	40.57	73.31
CDY28419	Canola	mitochondrion, plasma membrane	69.2	72.67
CDX94701	Canola	cytosol	57.84	71.29
CDX67411	Canola	plasma membrane	55.91	69.3
CDX99849	Canola	plasma membrane	76.14	66.4
CDY35284	Canola	plasma membrane	76.7	66.31
CDY26317	Canola	plasma membrane	76.14	66.14
AT1G29720.1	Thale cress	plasma membrane	76.02	65.65
CDY44292	Canola	plasma membrane	73.52	65.49
CDX99848	Canola	plasma membrane	75.45	65.16
CDY13695	Canola	plasma membrane	75.23	64.77
CDX94692	Canola	plasma membrane	72.05	63.78
CDY26319	Canola	plasma membrane	73.64	63.78
CDX77648	Canola	cytosol	30.11	60.92
CDX73325	Canola	plasma membrane	67.95	60.16
CDY67675	Canola	cytosol	8.75	59.69
CDY35292	Canola	plasma membrane	73.52	57.72
CDY67674	Canola	cytosol	47.16	56.31
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	29.66	55.41
CDX73324	Canola	nucleus	1.93	54.84
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	33.3	50.0
CDX98146	Canola	plasma membrane	56.7	49.9
CDY43187	Canola	plasma membrane	56.59	49.7
CDX98148	Canola	plasma membrane	56.82	49.16
VIT_10s0003g01990.t01	Wine grape	plasma membrane	48.98	46.95
CDY43185	Canola	plasma membrane	55.57	45.57
CDX97605	Canola	plasma membrane	45.68	43.84
CDX93632	Canola	plasma membrane	48.86	42.49
CDX95138	Canola	plasma membrane	48.64	42.29
CDX75790	Canola	peroxisome	44.66	41.85
CDX81476	Canola	cytosol	13.41	41.55
CDX98497	Canola	cytosol, plasma membrane, plastid	45.45	41.24
CDY35279	Canola	plasma membrane	47.5	41.22
CDX90208	Canola	plasma membrane	47.39	41.12
CDX82464	Canola	plasma membrane	44.32	40.04
CDX75792	Canola	plasma membrane	44.09	39.84
CDX98501	Canola	plasma membrane	46.14	39.8
CDX97606	Canola	plasma membrane	46.02	39.71
CDY26316	Canola	plasma membrane	45.8	39.63
CDX99850	Canola	plasma membrane	45.8	39.63
CDX75791	Canola	plasma membrane	45.68	39.61
CDY20088	Canola	plasma membrane	45.68	39.45
CDX82465	Canola	plasma membrane	45.34	39.31
CDX82466	Canola	plasma membrane	45.11	38.92
CDY60204	Canola	plasma membrane	46.02	38.79
CDY25853	Canola	plasma membrane	45.57	38.41
CDY32338	Canola	plasma membrane	44.77	38.29
CDX90205	Canola	plasma membrane	75.8	38.01
CDX97610	Canola	plasma membrane	45.23	35.19
CDX67736	Canola	plasma membrane	38.07	33.37
CDY59119	Canola	plasma membrane	37.95	33.27
CDX98288	Canola	plasma membrane	37.95	33.27
CDY42407	Canola	plasma membrane	38.52	32.82
CDY25239	Canola	plasma membrane	34.2	32.58
CDY10509	Canola	plasma membrane	37.95	32.52
CDY10508	Canola	plasma membrane	38.07	32.43
CDY47811	Canola	plasma membrane	37.39	32.41
CDY22357	Canola	plasma membrane	37.05	32.12
CDY46490	Canola	plasma membrane	37.05	32.09
CDY68250	Canola	plasma membrane	36.82	31.89
CDY12693	Canola	plasma membrane	33.52	29.41
CDY38804	Canola	golgi, plasma membrane	18.52	25.51
CDY11604	Canola	plasma membrane	18.07	24.88
CDY03757	Canola	plasma membrane	38.3	16.5
CDY43003	Canola	plasma membrane	38.41	16.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078I253
UniProt:A0A078I253	EnsemblPlants:CDY43183	ProteinID:CDY43183	ProteinID:CDY43183.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00076181001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Malectin	PFAM:PF07714	PFAM:PF11721	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF54	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0004EE6ED2
SEG:seg	:	:	:	:	:

Description

BnaA07g07710DBnaA07g07710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I253]

Coordinates

chrLK032548:-:16439..21610

Molecular Weight (calculated)

97560.0 Da

IEP (calculated)

7.506

GRAVY (calculated)

-0.170

Length

880 amino acids

Sequence
(BLAST)

001: MRVCSLLCRT LVRNYLSGTI PVEWASMPYI TSIKLSANNL SGPLPTWLQN FKNLKILGIE GNQFSGTIPD ELGNLTNLTK LHLASNKFIG RLPVTLARLV
101: NLEEFWISDN NFNGTIPGYI GTWSRLQKLF LHASGLKGPL PEAVARLENL VDLRISDTTG INFFPNISSK VIATLILRNV GLSGSVPSYI WNMSKLNRLD
201: LSFNKLTGEL QEVQQAPPHT YLTNNMLSGN VESASVYLHS KSVIDLSYNN FSWSSSCRDK RLLPCAGPTN CSKYQRSLHV NCGGGNVQIK TSSGKITYQA
301: DNSTTGAATN RHLENWGISN TGDFTDDTSH DDTYIISTNL TPSGDYPDLY KTARRSPLSL VYYAFCLENG AYNVKLHFVE IQFLDEELNS RLGRRIFDVY
401: VQGELFLRDF NIKDEANGTL KPVLKEVKAV NVTDHTLEIR LYWAGKGTVL FPKRGNYGPL ISAISLCHME KTKYNTNYPL IFGVTGALVA IILLALGLYA
501: QKRCRGDTNM RERDLRAQCL QTVWFTWRQL QAATNNFDQA NKLGEGGFGS VFKGELTDGT IVAVKQLSSK SRQGNREFVN EIGMISGLNH PNLVKLYGCC
601: VEKNQLLLVY EYMENNSLAL VLSEKSSPKL DWAARKKICV GIARGLEFLH EGSMIKMVHR DIKTTNVLLD ADLNAKISDF GLARLREEEH TQITTKIAGT
701: MGYMAPEYVL WGQLTEKADV YSFGVVAMEI VSGKSNTKPR GSADHVSLIN WALMLQQKGD ILEIVDPTLE GDFNSKEAVR MINVALVCTN SSPSLRPTMS
801: EVVQMLEGVI EIAQVMADPG LYGDDWSMSK LKDNDTHGSS SMSGVTDQTT MTMKFSVSGS DLYPESVISN STVEFPSSSV

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.