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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 6
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26316 Canola plasma membrane 98.43 98.43
Bra032333.1-P Field mustard plasma membrane 78.47 98.16
CDX90208 Canola plasma membrane 82.01 82.25
CDY35279 Canola plasma membrane 81.91 82.15
AT1G29750.2 Thale cress plasma membrane 79.65 79.33
CDY72653 Canola cytosol 14.75 60.48
VIT_10s0003g01880.t01 Wine grape cytosol 51.43 54.37
KRH59039 Soybean plasma membrane 52.31 54.06
PGSC0003DMT400073238 Potato cytosol, nucleus, plasma membrane 39.82 52.46
Solyc02g071880.2.1 Tomato plasma membrane 50.93 52.06
KRH21191 Soybean plasma membrane 50.74 50.79
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 29.2 50.68
CDX94698 Canola plasma membrane 19.27 49.75
CDX77648 Canola cytosol 20.85 48.74
CDX75790 Canola peroxisome 44.25 47.92
CDY49080 Canola cytosol 22.81 47.64
CDX97605 Canola plasma membrane 42.67 47.33
CDX75791 Canola plasma membrane 46.31 46.4
CDY43181 Canola cytosol 28.81 46.36
CDY35283 Canola cytosol, plasma membrane, plastid 29.11 46.32
CDX82466 Canola plasma membrane 46.41 46.27
CDY20088 Canola plasma membrane 46.21 46.12
CDX82464 Canola plasma membrane 44.15 46.1
CDX82465 Canola plasma membrane 45.92 46.01
CDX75792 Canola plasma membrane 44.05 46.0
CDY43183 Canola mitochondrion, plasma membrane 39.63 45.8
CDY32338 Canola plasma membrane 46.31 45.77
CDX98497 Canola cytosol, plasma membrane, plastid 43.46 45.57
CDX98501 Canola plasma membrane 45.53 45.39
CDX94703 Canola plasma membrane 38.64 45.38
CDX97606 Canola plasma membrane 45.43 45.29
CDY44292 Canola plasma membrane 43.95 45.24
CDX95138 Canola plasma membrane 44.74 44.96
CDY28419 Canola mitochondrion, plasma membrane 36.97 44.87
CDX93632 Canola plasma membrane 44.64 44.86
CDX94701 Canola cytosol 31.47 44.82
CDY35284 Canola plasma membrane 44.15 44.11
CDX99849 Canola plasma membrane 43.76 44.1
CDX94692 Canola plasma membrane 42.97 43.96
CDX67411 Canola plasma membrane 30.68 43.94
CDY26317 Canola plasma membrane 43.76 43.93
CDX99848 Canola plasma membrane 43.95 43.87
CDY35293 Canola cytosol 34.81 43.87
CDY43187 Canola plasma membrane 43.07 43.71
CDX81476 Canola cytosol 12.19 43.66
CDY13695 Canola plasma membrane 43.85 43.64
CDX98146 Canola plasma membrane 42.77 43.5
CDY60204 Canola plasma membrane 44.54 43.39
CDY25853 Canola plasma membrane 44.25 43.1
CDY26319 Canola plasma membrane 42.97 43.01
CDX98148 Canola plasma membrane 42.58 42.58
CDX73325 Canola plasma membrane 40.51 41.45
CDX97610 Canola plasma membrane 45.13 40.58
CDY43185 Canola plasma membrane 42.08 39.89
CDY35292 Canola plasma membrane 43.76 39.7
CDY10509 Canola plasma membrane 37.07 36.71
CDY59119 Canola plasma membrane 35.99 36.45
CDY67675 Canola cytosol 4.62 36.43
CDY42407 Canola plasma membrane 36.97 36.4
CDX67736 Canola plasma membrane 35.89 36.35
CDY10508 Canola plasma membrane 36.87 36.3
CDY22357 Canola plasma membrane 36.18 36.26
CDY47811 Canola plasma membrane 36.18 36.26
CDX98288 Canola plasma membrane 35.79 36.26
CDY67674 Canola cytosol 26.16 36.09
CDY25239 Canola plasma membrane 32.74 36.04
CDY46490 Canola plasma membrane 35.99 36.02
CDY68250 Canola plasma membrane 35.69 35.73
CDY12693 Canola plasma membrane 32.65 33.1
CDY38804 Canola golgi, plasma membrane 19.57 31.14
CDY11604 Canola plasma membrane 19.17 30.52
CDX90205 Canola plasma membrane 44.15 25.58
CDY03757 Canola plasma membrane 36.68 18.26
CDY43003 Canola plasma membrane 36.68 17.78
CDX73324 Canola nucleus 0.49 16.13
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078ECM9
EnsemblPlants:CDX99850ProteinID:CDX99850ProteinID:CDX99850.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00108569001InterPro:IPR000719InterPro:IPR001611
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypInterPro:Malectin
PFAM:PF07714PFAM:PF11721PFAM:PF13855ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006
PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domSMART:SM00220SMART:SM00369SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EE16E0SEG:seg:
Description
BnaC05g22720D
Coordinates
chrLK031914:-:589300..594992
Molecular Weight (calculated)
112238.0 Da
IEP (calculated)
5.906
GRAVY (calculated)
-0.175
Length
1017 amino acids
Sequence
(BLAST)
0001: MFADKKKKKG VNIFAFSVFA IFCFKFYDVN AVKLPKSEVD ALQQIAKTLG SKFWKFDAEN CKVETVGLTE TPPPTAKQEI ECECSPTNET DCHIIKIAFK
0101: DHNLPGTLPP EIQKLPYLQE IDFAYNYLNG TIPLEWTMTN LTTISLLVNR LSGPIPKEVG DMTSLTSLDL ESNAFTGTIP EELGNLANLE KLLLSSNKLT
0201: GGLPDSLAKL EKLEDFRIND LQLTGRIPSY IQNWKGLKRL EMIASGLTGP IPSVISTFDK MKNLRITDIG GPVQPFPSLK NSTEFSKLIL KNCNIAGQIP
0301: TYLSSLKNLE TLDLSFNKLA GTIPAFAQAE DLRFIMLTGN KLEGEAPDGL LRDGITVDLS YNNLKWQSPE SSSCRPHMNL NLNLFQSTSI KKSSKFLPCI
0401: KDFVCPTYYS CLNINCGGSD LTVEANNSKI IYEGDGEVEG GAAKYYLNPE SYWGFSSTGD YMDDNNFQNT RFTMFVPTSN LSELYKTARI APASLTYFHA
0501: CLENGKYTVN LNFAEMRFTN DDTYSHLGRR IFDIYIQEKL VLKDFNIMAE AKEAQKPITK SFTVNVTNHF LAIRLGWGGK GTTRIPERGV YGPIISAISI
0601: LSDSKPCALA GSGMSTGASI GLGIGVACLI IFLLGVLWFC GCLPCFGRRK DPNEEELPSG TFTLRQIKAA TNDFSPANKI GEGGFGPVFK GVLSDGRVVA
0701: VKQLSSKSRQ GNREFLNEIG AISCLQHPNL VKLHGFCVER AQMLLVYECM ENNSLAQALF SPKDKQIPMD WATRFNICCG VAKGLAFLHE ESPLKFVHRD
0801: IKATNILLDK DLTPKISDFG LARLDEEENT HVSTKVAGTI GYMAPEYALW GYLSFKADVY SYGVLVLEIV AGINNSSFMA AGDEVCLLEW ATQCEESGHL
0901: MQVVDERLRP EVNKKEAEAV IKVALVCTNA SPTDRPIMSE VVAMLEGFYP VPDSTPGTSK KSGDIRFKAF KDVRKGMDND SKTQCSVNSY PSSSFSSTTN
1001: VDTNVAGQET KQEEPRS
Best Arabidopsis Sequence Match ( AT1G29750.2 )
(BLAST)
0001: MISLYQILAE KKKKKKNDLN IFAFSVFAII CFKFYSVNAI KLPQQEVDAL QQIATTLGSK FWKFDAENCK IEMVGLTETP PPTAKQEIEC ECSPTNDTDC
0101: HVVKFAFKDH NLPGTLPQIV KLPYLREIDL AYNYINGTLP REWASSNLTF ISLLVNRLSG EIPKEFGNSS LTYLDLESNA FSGTIPQELG NLVHLKKLLL
0201: SSNKLTGTLP ASLARLQNMT DFRINDLQLS GTIPSYIQNW KQLERLEMIA SGLTGPIPSV ISVLSNLVNL RISDIRGPVQ PFPSLKNVTG LTKIILKNCN
0301: ISGQIPTYLS HLKELETLDL SFNKLVGGIP SFAQAENLRF IILAGNMLEG DAPDELLRDG ITVDLSYNNL KWQSPESRAC RPNMNLNLNL FQSTSTKKSS
0401: KFLPCIKDFK CPRYSSCLHV NCGGSDMYVK EKKTKELYEG DGNVEGGAAK YFLKPDANWG FSSTGDFMDD NNFQNTRFTM FVPASNQSDL YKSARIAPVS
0501: LTYFHACLEN GNYTINLDFA EIRFTNDENY NRLGRRLFDI YIQEKLVAKD FNIMDEAKGA QTPIIKPLTA YVTNHFLTIR LSWAGKGTTR IPTRGVYGPI
0601: ISAISIVSDS KPCERPKTGM SPGAYIAIGI GAPCLIIFIL GFLWICGCLP RCGRQRKDPY EEELPSGTFT LRQIKFATDD FNPTNKIGEG GFGAVFKGVL
0701: ADGRVVAVKQ LSSKSRQGNR EFLNEIGAIS CLQHPNLVKL HGFCVERAQL LLAYEYMENN SLSSALFSPK HKQIPMDWPT RFKICCGIAK GLAFLHEESP
0801: LKFVHRDIKA TNILLDKDLT PKISDFGLAR LDEEEKTHIS TKVAGTIGYM APEYALWGYL TFKADVYSFG VLVLEIVAGI TNSNFMGAGD SVCLLEFANE
0901: CVESGHLMQV VDERLRPEVD RKEAEAVIKV ALVCSSASPT DRPLMSEVVA MLEGLYPVPE STPGVSRNAG DIRFKAFKDL RRGMENNSKT QCSVKSYPSS
1001: SSTSSGAGQA VQERKKEESR P
Arabidopsis Description
RKF1Probable LRR receptor-like serine/threonine-protein kinase RFK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXF2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.