CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72653	Canola	cytosol	33.86	86.29
CDX94701	Canola	cytosol	95.25	84.31
CDX94698	Canola	plasma membrane	52.22	83.76
CDY49080	Canola	cytosol	56.96	73.92
CDY35283	Canola	cytosol, plasma membrane, plastid	74.21	73.4
CDX73324	Canola	nucleus	3.32	67.74
Bra030167.1-P	Field mustard	plasma membrane	98.58	63.96
CDX67411	Canola	plasma membrane	70.41	62.68
CDX77648	Canola	cytosol	40.66	59.08
CDY28419	Canola	mitochondrion, plasma membrane	76.42	57.64
CDY35293	Canola	cytosol	73.1	57.25
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	40.66	54.56
CDY67674	Canola	cytosol	63.29	54.27
CDX94703	Canola	plasma membrane	74.21	54.16
CDY43183	Canola	mitochondrion, plasma membrane	73.73	52.95
CDY44292	Canola	plasma membrane	76.11	48.68
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	44.3	47.78
CDY26319	Canola	plasma membrane	76.27	47.44
CDY13695	Canola	plasma membrane	76.58	47.36
CDX99848	Canola	plasma membrane	76.27	47.3
AT1G29720.1	Thale cress	plasma membrane	74.37	46.12
CDX94692	Canola	plasma membrane	72.47	46.08
CDY35284	Canola	plasma membrane	74.21	46.07
CDX99849	Canola	plasma membrane	70.41	44.1
CDY26317	Canola	plasma membrane	70.41	43.93
CDX81476	Canola	cytosol	19.62	43.66
CDX73325	Canola	plasma membrane	68.2	43.36
CDY35292	Canola	plasma membrane	68.04	38.36
VIT_10s0003g01990.t01	Wine grape	plasma membrane	52.53	36.17
CDY43187	Canola	plasma membrane	54.59	34.43
CDX98148	Canola	plasma membrane	55.38	34.41
CDX98146	Canola	plasma membrane	54.43	34.4
CDX97605	Canola	plasma membrane	46.04	31.73
CDY43185	Canola	plasma membrane	53.16	31.31
CDX75790	Canola	peroxisome	45.73	30.78
CDX93632	Canola	plasma membrane	47.63	29.74
CDX95138	Canola	plasma membrane	47.47	29.64
CDX98497	Canola	cytosol, plasma membrane, plastid	45.41	29.59
CDY35279	Canola	plasma membrane	46.84	29.19
CDY20088	Canola	plasma membrane	46.84	29.05
CDY60204	Canola	plasma membrane	47.78	28.93
CDX90208	Canola	plasma membrane	46.36	28.9
CDX99850	Canola	plasma membrane	46.36	28.81
CDY26316	Canola	plasma membrane	46.36	28.81
CDY32338	Canola	plasma membrane	46.84	28.77
CDX82464	Canola	plasma membrane	44.3	28.75
CDY25853	Canola	plasma membrane	47.47	28.74
CDX97606	Canola	plasma membrane	46.36	28.73
CDX75792	Canola	plasma membrane	44.15	28.64
CDX82465	Canola	plasma membrane	45.73	28.47
CDX82466	Canola	plasma membrane	45.89	28.43
CDX98501	Canola	plasma membrane	45.89	28.43
CDX75791	Canola	plasma membrane	45.25	28.18
CDX90205	Canola	plasma membrane	73.42	26.44
CDX97610	Canola	plasma membrane	45.25	25.29
CDY25239	Canola	plasma membrane	35.92	24.57
CDY10509	Canola	plasma membrane	38.92	23.95
CDX67736	Canola	plasma membrane	37.97	23.9
CDX98288	Canola	plasma membrane	37.97	23.9
CDY59119	Canola	plasma membrane	37.97	23.9
CDY47811	Canola	plasma membrane	38.13	23.74
CDY42407	Canola	plasma membrane	38.77	23.72
CDY22357	Canola	plasma membrane	37.97	23.65
CDY10508	Canola	plasma membrane	38.13	23.33
CDY12693	Canola	plasma membrane	37.03	23.33
CDY46490	Canola	plasma membrane	37.5	23.33
CDY68250	Canola	plasma membrane	37.18	23.13
CDY03757	Canola	plasma membrane	38.77	11.99
CDY43003	Canola	plasma membrane	39.08	11.77
CDY11604	Canola	plasma membrane	11.23	11.11
CDY38804	Canola	golgi, plasma membrane	11.23	11.11
CDY67675	Canola	cytosol	0.63	3.1

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	GO:A0A078I032	UniProt:A0A078I032
EnsemblPlants:CDY43181	ProteinID:CDY43181	ProteinID:CDY43181.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00076179001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Malectin
PFAM:PF07714	PFAM:PF11721	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF55	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0004EEBED1	SEG:seg	:	:

Description

BnaA07g07730DBnaA07g07730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I032]

Coordinates

chrLK032548:-:3935..6622

Molecular Weight (calculated)

70129.5 Da

IEP (calculated)

6.412

GRAVY (calculated)

-0.278

Length

632 amino acids

Sequence
(BLAST)

001: MMDRGFVSNT SDDGDNRSIV DQRSLHINCG GDNVVITNSS HKITYQADNN ETKAATNQHF ENWGVSSTGY LPNDIYIITP TFALPENSPA FYKSARQSAQ
101: SLVYYAFCLE NGAYNVKLHF MEIQFSNEEP YSRLGRRIFD IYLQGELFKR DFNIKEEANG NRKPIVKEAN VNVANHLLEI RLYWAGKGTT LIPQRGNYGP
201: IISAISLCHS SLGPGCGAEK TIHRTNYPLI FGITGALLAV MLLALGLYAQ KRCRGDKNTR ERDLRAQGLQ TVCFTWRQLQ AATNNFNEAK KLGEGGFGSV
301: FKGELSDGTI IAVKQLSAKS CQGNREFVNE IGMISGLNHP NLVKLYGCCV EKNQLLLVYE YMENNSLALA LNGESAPNLD WAARQRICVG IARGLEFLHE
401: GSMIRMVHRD IKTTNVLLDA DLNAKISDFG LARLHEEEHT HISTKIAGTI GYMAPEYALY GELTEKADVF SFGVVAMEIV SGKSNTKQKG SADHVWLIKW
501: ARKLQQTGDI MDIIDPVLEG DFNRKEAERM IKVSLVCTNS SPLLRPTMSE VVQMLEGEIE ITQVLSDPGL YEHNFSISKL MGTDTHGSSS TSGLTDQTET
601: TMKSSVSSTD LYPLYPESML LNSTQNFSSS AF

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.