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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98148 Canola plasma membrane 96.51 95.08
Bra030170.1-P Field mustard plasma membrane 70.86 92.69
Bra030174.1-P Field mustard plasma membrane 88.22 92.47
CDX98146 Canola plasma membrane 90.52 90.7
CDX77648 Canola cytosol 38.82 89.43
AT1G29730.2 Thale cress plasma membrane 81.64 81.72
AT1G29740.1 Thale cress plasma membrane 86.53 80.43
CDY43185 Canola plasma membrane 85.73 80.06
CDY72653 Canola cytosol 16.27 65.73
CDX94698 Canola plasma membrane 22.75 57.87
CDY35284 Canola plasma membrane 58.78 57.86
CDY44292 Canola plasma membrane 56.39 57.19
CDX99848 Canola plasma membrane 57.58 56.62
CDY43183 Canola mitochondrion, plasma membrane 49.7 56.59
CDY67675 Canola cytosol 7.29 56.59
CDY26319 Canola plasma membrane 56.79 56.0
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 26.25 55.84
CDX67411 Canola plasma membrane 39.52 55.77
CDX94703 Canola plasma membrane 48.1 55.66
CDY49080 Canola cytosol 27.05 55.65
CDX99849 Canola plasma membrane 55.89 55.5
CDX94692 Canola plasma membrane 54.99 55.43
CDY35283 Canola cytosol, plasma membrane, plastid 35.33 55.4
CDY13695 Canola plasma membrane 56.39 55.28
CDY26317 Canola plasma membrane 55.59 54.99
CDY35293 Canola cytosol 44.21 54.89
CDY43181 Canola cytosol 34.43 54.59
CDX94701 Canola cytosol 38.82 54.48
CDY28419 Canola mitochondrion, plasma membrane 45.11 53.94
VIT_10s0003g01990.t01 Wine grape plasma membrane 47.31 51.63
CDY35292 Canola plasma membrane 56.59 50.58
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 28.74 49.15
CDX73325 Canola plasma membrane 47.9 48.29
CDX81476 Canola cytosol 13.37 47.18
CDX95138 Canola plasma membrane 47.21 46.74
CDX93632 Canola plasma membrane 47.11 46.64
CDX75790 Canola peroxisome 43.61 46.54
CDY67674 Canola cytosol 33.63 45.73
CDX97605 Canola plasma membrane 41.52 45.37
CDX82464 Canola plasma membrane 43.71 44.97
CDX75792 Canola plasma membrane 43.61 44.87
CDX90208 Canola plasma membrane 45.31 44.77
CDY35279 Canola plasma membrane 45.11 44.58
CDY20088 Canola plasma membrane 45.31 44.55
CDX82465 Canola plasma membrane 44.91 44.34
CDX82466 Canola plasma membrane 45.01 44.22
CDX75791 Canola plasma membrane 44.71 44.14
CDX98497 Canola cytosol, plasma membrane, plastid 42.22 43.61
CDY32338 Canola plasma membrane 44.71 43.54
CDY25853 Canola plasma membrane 45.31 43.49
CDX98501 Canola plasma membrane 44.21 43.43
CDY60204 Canola plasma membrane 45.11 43.3
CDY26316 Canola plasma membrane 43.81 43.17
CDX97606 Canola plasma membrane 43.91 43.14
CDX99850 Canola plasma membrane 43.71 43.07
CDX97610 Canola plasma membrane 43.21 38.28
CDY42407 Canola plasma membrane 37.43 36.3
CDY22357 Canola plasma membrane 36.43 35.96
CDY47811 Canola plasma membrane 36.33 35.86
CDY25239 Canola plasma membrane 33.03 35.82
CDY10508 Canola plasma membrane 36.93 35.82
CDX98288 Canola plasma membrane 35.83 35.76
CDX67736 Canola plasma membrane 35.83 35.76
CDY59119 Canola plasma membrane 35.83 35.76
CDY10509 Canola plasma membrane 36.43 35.54
CDY46490 Canola plasma membrane 35.83 35.33
CDY68250 Canola plasma membrane 35.53 35.04
CDY12693 Canola plasma membrane 33.23 33.2
CDX90205 Canola plasma membrane 57.98 33.11
CDX73324 Canola nucleus 1.0 32.26
CDY38804 Canola golgi, plasma membrane 19.36 30.36
CDY11604 Canola plasma membrane 19.16 30.05
CDY03757 Canola plasma membrane 36.13 17.72
CDY43003 Canola plasma membrane 36.93 17.64
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078HZ71
UniProt:A0A078HZ71EnsemblPlants:CDY43187ProteinID:CDY43187ProteinID:CDY43187.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00076186001InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtyp
InterPro:MalectinPFAM:PF00069PFAM:PF11721PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF55InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SMART:SM00369SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EEFE4ESEG:seg::::
Description
BnaA07g07670DBnaA07g07670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZ71]
Coordinates
chrLK032548:-:47754..53127
Molecular Weight (calculated)
111154.0 Da
IEP (calculated)
6.963
GRAVY (calculated)
-0.125
Length
1002 amino acids
Sequence
(BLAST)
0001: MIMSQSRHFS SLFTVLIFIC LVYTVSASSP SLHPDEVKAL KDIASTLGVK HLNLSEDPCL TKTLVITQDV LKEGHNSTIR CDCHFNNNKT CHITHFILKT
0101: FSLPGRLPPE LSKLQYLESI DLCLNYLHGS IPMEWASLPY LTSISVCANR LSGDIPKGLG KFINLTQLIL EANQFSGIIP EELGNLVNLE GLVLSSNQLV
0201: GSVPETLGRL KNLTNLRFSD NHLNGSIPEF IGNLSKLKRL ELYASGLREP IPDSIFRLEN LVDLRISDTT AGLRQFPHII SKNLKYLVLR NLNLTGPIPT
0301: TIWGLPNLMT LDLSFNRLTG EIPADAAAAK FTYLTGNKLS GKIESGPFLT ASTNIDLSYN NFTWSPSCRE RDNVNTYESS RSKNRLTSLL PCSAISQCLS
0401: YIKSLHINCG GPDVTIENSR GSILYEGNYG LTGSATNNHG KNWGFSNTGD FMDDKLPEDA YSISSESPVS AKYPELYQTA RRSPLSLAYF AFCFENGSYN
0501: VKLHFAEIQF SDEEPYARLA KRFFNIYVQG KLIWEDFNIR EEANGTHKEV IKEVNTTVTD NTLEIRLYWA GKGTTIIPKR GNYGSLISAI SVCPSSESEC
0601: GVEVKTPPVT KEHKSRIYPL ILVITALILS LAFLIVGAFY WKKCVRNADS GKRGSFSLKQ LKVATDNFDP LNKIGEGGFG SVYKGRLPDG TLIAVKKLSS
0701: KSRQGNKEFI NEIGMIACLQ HPNLVKLYGC CCENNQLLLV YEYLENNCLA DALFGRSGLK LEWGTRHKIC LGIARGLAFL HEDSAVKIIH RDIKGTNVLL
0801: DKDLNSKISD FGLARLHEDE KSHITTRVAG TIGYMAPEYA MRGHLTEKAD VYSFGVVAME IVSGKSNANY TPDNECCVGL LDWAFVLQKK GAFSEILDPK
0901: LEGVFDVMEA ERMIKVSLLC SNKSPTLRPT MSEVVKMLEG ETEIEQIIAD PGVYGDELRF KRFSEIGTSS LPSDYLVSIP SSCESAYDLY PLSPESTVFS
1001: RP
Best Arabidopsis Sequence Match ( AT1G29740.2 )
(BLAST)
0001: MSAAYKLMIM SRSRLFSSLL SVLTLIYLVC TVLSASPSLH PDEVEALKDI ALTLGVKHLN LSEDPCLTKT LVITQDVLKE GQNSTIRCDC HFNNNNTCHI
0101: THFVLKTFSL PGRLPPEFSK LRYLEFIDLC RNYLYGSIPM EWASLPYLKS ISVCANRLTG DIPKGLGKFI NLTQLGLEAN QFSGTIPKEL GNLVNLEGLA
0201: FSSNQLVGGV PKTLARLKKL TNLRFSDNRL NGSIPEFIGN LSKLQRLELY ASGLKDPIPY SIFRLENLID LRISDTAAGL GQVPLITSKS LKFLVLRNMN
0301: LTGPIPTSLW DLPNLMTLDL SFNRLTGEVP ADASAPKYTY LAGNMLSGKV ESGPFLTAST NIDLSYNNFT WSQSCKERNN INTYASSRST NSLTRLLPCS
0401: AINLCQNYNR SLHINCGGPD VTIENSRGRF LYEGDNYGLT GSATNYYGKN WGFSNTGDFM DDAITEDTYT VSSESAVSAK YPDLYQNARR SPLSLAYFAI
0501: CFENGSYNVK LHFAEIQFSD EEPFSRLAKR VFNIYVQGKL IWEDFSIREE ANGTHKEVIK EVNTTVTDNT LEIRLYWAGK GTTIIPKRGN YGSLISAISV
0601: CPSSESECGV PVQIHPVTKQ QHKQRKYHLI LGIAALIVSL SFLILGALYW RICVSNADGE KRGSFSLRQL KVATDDFNPL NKIGEGGFGS VYKGRLPNGT
0701: LIAVKKLSSK SCQGNKEFIN EIGIIACLQH PNLVKLYGCC VEKTQLLLVY EYLENNCLAD ALFGRSGLKL DWRTRHKICL GIARGLAFLH EDSAVKIIHR
0801: DIKGTNILLD KDLNSKISDF GLARLHEDDQ SHITTRVAGT IGYMAPEYAM RGHLTEKADV YSFGVVAMEI VSGKSNANYT PDNECCVGLL DWAFVLQKKG
0901: AFDEILDPKL EGVFDVMEAE RMIKVSLLCS SKSPTLRPTM SEVVKMLEGE TEIEEIISDP GAYGDELRFK KTAEIGSSSL PSDYLVSITS SCESAYDLYP
1001: LSPESVVFSR P
Arabidopsis Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I337]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.