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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • plasma membrane 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY28419 Canola mitochondrion, plasma membrane 73.74 87.47
CDY72653 Canola cytosol 21.33 85.48
CDY49080 Canola cytosol 34.61 70.64
CDY35283 Canola cytosol, plasma membrane, plastid 44.06 68.54
CDY43181 Canola cytosol 43.36 68.2
CDX94701 Canola cytosol 48.89 68.07
CDY43183 Canola mitochondrion, plasma membrane 60.16 67.95
CDX94703 Canola plasma membrane 58.55 67.21
CDX94698 Canola plasma membrane 26.46 66.75
CDY35293 Canola cytosol 53.72 66.17
CDX67411 Canola plasma membrane 46.58 65.21
CDY67675 Canola cytosol 8.35 64.34
CDY44292 Canola plasma membrane 63.68 64.07
CDY13695 Canola plasma membrane 64.69 62.92
CDX99848 Canola plasma membrane 64.49 62.9
CDY35284 Canola plasma membrane 63.88 62.38
CDY26319 Canola plasma membrane 62.98 61.61
CDX99849 Canola plasma membrane 62.17 61.25
CDY26317 Canola plasma membrane 61.87 60.71
CDX77648 Canola cytosol 26.06 59.54
CDX94692 Canola plasma membrane 59.46 59.46
CDY35292 Canola plasma membrane 62.68 55.58
CDY67674 Canola cytosol 38.63 52.1
CDX98146 Canola plasma membrane 48.59 48.3
CDY43187 Canola plasma membrane 48.29 47.9
CDX98148 Canola plasma membrane 48.99 47.89
CDY43185 Canola plasma membrane 47.89 44.36
CDX97605 Canola plasma membrane 40.14 43.51
CDX75790 Canola peroxisome 40.04 42.39
CDX82464 Canola plasma membrane 40.95 41.79
CDX93632 Canola plasma membrane 42.45 41.7
CDX95138 Canola plasma membrane 42.35 41.6
CDX90208 Canola plasma membrane 42.35 41.52
CDX75792 Canola plasma membrane 40.64 41.48
CDX98497 Canola cytosol, plasma membrane, plastid 40.44 41.44
CDY35279 Canola plasma membrane 42.25 41.42
CDX75791 Canola plasma membrane 41.45 40.59
CDX98501 Canola plasma membrane 41.65 40.59
CDX99850 Canola plasma membrane 41.45 40.51
CDY26316 Canola plasma membrane 41.45 40.51
CDX97606 Canola plasma membrane 41.35 40.29
CDX82466 Canola plasma membrane 41.35 40.29
CDX82465 Canola plasma membrane 41.05 40.2
CDY20088 Canola plasma membrane 40.95 39.94
CDX81476 Canola cytosol 11.37 39.79
CDY32338 Canola plasma membrane 40.85 39.46
CDY25853 Canola plasma membrane 40.64 38.7
CDY60204 Canola plasma membrane 40.54 38.6
CDX97610 Canola plasma membrane 41.05 36.07
CDX90205 Canola plasma membrane 63.48 35.95
CDX67736 Canola plasma membrane 34.31 33.96
CDX98288 Canola plasma membrane 34.1 33.76
CDY59119 Canola plasma membrane 33.9 33.57
CDY25239 Canola plasma membrane 30.99 33.33
CDY42407 Canola plasma membrane 34.61 33.3
CDY10509 Canola plasma membrane 34.1 33.01
CDY10508 Canola plasma membrane 34.1 32.82
CDY46490 Canola plasma membrane 33.4 32.68
CDY22357 Canola plasma membrane 33.2 32.51
CDY68250 Canola plasma membrane 33.0 32.28
CDY47811 Canola plasma membrane 32.9 32.22
CDY12693 Canola plasma membrane 30.28 30.01
CDY38804 Canola golgi, plasma membrane 17.61 27.39
CDY11604 Canola plasma membrane 17.3 26.92
CDY03757 Canola plasma membrane 33.5 16.3
CDY43003 Canola plasma membrane 33.7 15.97
CDX73324 Canola nucleus 0.0 0.0
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078C928
EnsemblPlants:CDX73325ProteinID:CDX73325ProteinID:CDX73325.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00106444001
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:MalectinPFAM:PF00069
PFAM:PF11721ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF55
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52047SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelixUniParc:UPI0004EEA6F9::::
Description
BnaC05g27810D
Coordinates
chrLK031798:-:1684246..1691192
Molecular Weight (calculated)
109365.0 Da
IEP (calculated)
7.417
GRAVY (calculated)
-0.078
Length
994 amino acids
Sequence
(BLAST)
001: MEWASLPYFT SMSLCANHLT GPLPAGLQNF KSLTFLGIEA NQFSGPIPDE LGSMTNLTKL HLASNQFNGS LPITLARLVN LKDLVSDNNF SGTIPAYIGN
101: WFGVQRLRHI HASGLKGPIP EAVARLKNLN ELRISDTTGI NVFPILSSGA IQTLTLRNVG LSGPIPSYIW SMPNLKNLSL CANHLTGPLP AGLQNFKSLT
201: FLGIEANQFS GPIPDELGSM TNLTKLHLAS NQFNGSLPIT LARLVNLKDF RVSDNNFSGT IPAYIGNWFG VQRLHIHASG LKGPIPEAVA RLKNLNELRI
301: SDTTGINVFP ILSSGAIQTL TLRNVGLSGP IPSYIWSMPN LKNLDLSFNK LTGGVQELEK APANTYLTGN MLSGNVGSAL SIYEEANIDI SYNNFSWSST
401: CKDKSNINTF RSSYLKNNLI GLLPCAGPMN CKRYQRSLHI NCGGESTTVT NTSGKIIYEV DNSETKSVTN QHFQNRGISN TGLLSNDIYT ISTSLTLPGG
501: SPDFYKTARR SAISLVYYAF CLENGAYNVK LHFMEIQFTD EKLYSRLGRR IFDVYIQGEL FLRDFNIKEE ANGTLKPVVK EVNLNVTDHV LEIQLYWAGK
601: GTTLITERGN YGPFISAISL CHSSREPQCG AEITKHHTKN TLIFGVTGAV VAITILAFGL YALKRCRGDK NTTERVDLKT QGLQTVCFTW RQLQTATNNF
701: DQANKLGEGG FGTVFKGELS DGIIIAVKQL SSNSCQGNRE FVNEIGMISG LNHPNLVKLY GCCVEKNQLL LVYEYMENNS LALALYVMSF LTLDWETRQK
801: ICVGIARGLE FLHEGSMIRM VHRDIKTTNV LLDADLNAKI SDFGLARLDE EEHSHISTKI AGTIGYMAPE YALWGQLTEK ADVYSFGVVA MEIVSGKSNV
901: KPQGKDDHVS LINWLNMCTC VSTNAMEVVD PVLQGDFNSK EAVRMIKVAL VCTNSSPALR PTMLEAVQML EGEMEITPVM SDHSLYEHNL VSQR
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.