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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032331.1-P Field mustard cytosol 67.03 96.47
CDY26319 Canola plasma membrane 95.19 95.47
CDX73324 Canola nucleus 2.65 87.1
CDY72653 Canola cytosol 21.2 87.1
CDX94698 Canola plasma membrane 31.01 80.2
CDY35283 Canola cytosol, plasma membrane, plastid 49.17 78.4
CDY13695 Canola plasma membrane 76.84 76.61
CDY43181 Canola cytosol 47.3 76.27
CDX94701 Canola cytosol 53.29 76.05
CDY44292 Canola plasma membrane 73.41 75.71
CDY43183 Canola mitochondrion, plasma membrane 65.16 75.45
CDX94703 Canola plasma membrane 63.49 74.71
CDY35284 Canola plasma membrane 74.58 74.66
CDY49080 Canola cytosol 35.52 74.33
AT1G29720.1 Thale cress plasma membrane 73.99 73.99
CDY28419 Canola mitochondrion, plasma membrane 60.84 73.99
CDX94692 Canola plasma membrane 71.54 73.34
CDY35293 Canola cytosol 58.0 73.23
CDX99849 Canola plasma membrane 72.42 73.14
CDY67675 Canola cytosol 9.22 72.87
CDY26317 Canola plasma membrane 72.42 72.85
CDX67411 Canola plasma membrane 50.05 71.83
CDY35292 Canola plasma membrane 72.13 65.57
CDX73325 Canola plasma membrane 62.9 64.49
CDX77648 Canola cytosol 25.81 60.46
CDY43187 Canola plasma membrane 56.62 57.58
CDX98148 Canola plasma membrane 56.92 57.03
CDX98146 Canola plasma membrane 55.94 57.0
CDY67674 Canola cytosol 40.33 55.77
VIT_10s0003g02020.t01 Wine grape mitochondrion, plasma membrane, plastid 24.73 53.5
CDY43185 Canola plasma membrane 54.86 52.1
VIT_10s0003g01990.t01 Wine grape plasma membrane 44.65 49.56
GSMUA_Achr6P25980_001 Banana cytosol, mitochondrion, plasma membrane, plastid 26.99 46.93
CDX95138 Canola plasma membrane 45.34 45.65
CDX93632 Canola plasma membrane 45.24 45.55
CDX75790 Canola peroxisome 41.9 45.47
CDX90208 Canola plasma membrane 44.95 45.17
CDY35279 Canola plasma membrane 44.85 45.07
CDX97605 Canola plasma membrane 40.24 44.71
CDX82464 Canola plasma membrane 42.39 44.35
CDX75791 Canola plasma membrane 44.16 44.34
CDX82466 Canola plasma membrane 44.26 44.22
CDY20088 Canola plasma membrane 44.16 44.16
CDX75792 Canola plasma membrane 42.1 44.05
CDX82465 Canola plasma membrane 43.87 44.04
CDX99850 Canola plasma membrane 43.87 43.95
CDY32338 Canola plasma membrane 44.36 43.93
CDX98501 Canola plasma membrane 43.96 43.92
CDY26316 Canola plasma membrane 43.77 43.85
CDX98497 Canola cytosol, plasma membrane, plastid 41.51 43.61
CDX97606 Canola plasma membrane 43.57 43.53
CDX90205 Canola plasma membrane 74.78 43.42
CDX81476 Canola cytosol 12.07 43.31
CDY60204 Canola plasma membrane 42.59 41.57
CDY25853 Canola plasma membrane 42.49 41.48
CDX97610 Canola plasma membrane 42.39 38.2
CDY42407 Canola plasma membrane 37.1 36.59
CDX67736 Canola plasma membrane 36.02 36.55
CDY59119 Canola plasma membrane 36.02 36.55
CDY47811 Canola plasma membrane 36.41 36.55
CDY22357 Canola plasma membrane 36.41 36.55
CDY46490 Canola plasma membrane 36.41 36.52
CDY10509 Canola plasma membrane 36.8 36.51
CDX98288 Canola plasma membrane 35.92 36.45
CDY68250 Canola plasma membrane 36.31 36.42
CDY10508 Canola plasma membrane 36.8 36.3
CDY25239 Canola plasma membrane 32.68 36.04
CDY12693 Canola plasma membrane 33.07 33.6
CDY38804 Canola golgi, plasma membrane 19.63 31.3
CDY11604 Canola plasma membrane 19.33 30.83
CDY03757 Canola plasma membrane 36.51 18.21
CDY43003 Canola plasma membrane 36.7 17.83
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078EKF9
EnsemblPlants:CDX99848ProteinID:CDX99848ProteinID:CDX99848.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00108565001
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:MalectinPFAM:PF07714
PFAM:PF11721ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF55
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF37B9SEG:seg:
Description
BnaC05g22700D
Coordinates
chrLK031914:-:558983..564610
Molecular Weight (calculated)
112186.0 Da
IEP (calculated)
6.888
GRAVY (calculated)
-0.137
Length
1019 amino acids
Sequence
(BLAST)
0001: MLIVFSVLLF FIIITSFLAS STSVSPSLHS DELNALEKIA TTLGIKGLNL SYGDPCSLGT LKMMQDVDVI SNPDTGNSTI RCDCSFNKST TCHITSIDLK
0101: TLGLPGKLPP ELANLRYLQS IDLCRNYLTG SIPMEWASLP YLTSISLCAN NLSGPLPTGL QNFKNLTVLG VEANQFSGPI PEELGNLTKL IRLHLTSNQF
0201: TGNLPNSLAK LVNLEDFRVS DNNFNGTIPK YIGNWSRLQR LGILASGLKG PIPDAVTRLE NLIDMSISDT TGINSFPNMS SKAIRKLILR NVSLSGAIPS
0301: YIWNLPELKT LDLSFNSLTG EVRGIQSAPK YTYLTRNRLS GDAGSGVFLN SKSNIDISYN NFSWSSSCQE KSNINTYQSS YLKNNLTGLL PCAGPINCTS
0401: YQRTLHINCG GENTVIKNSS HKISYEADDS TVYSATNQHF KTWGISNTGV FAADEHSEND TYIISARSKL PGDSPNLYKT ARRSALSLVY YAFCLENGPY
0501: NVKLLFMEIQ FSDEEPFSRL GRRIFDVYVQ GELFLKDFNI KEESKGTMTP VVKEVKAVNV TNHMLEIQLY WAGKGTTLIP KRGNYGPLIS GISLCHHSME
0601: PQCGAEKIRH QTNYPLIFGT IAALVTIILL ALGIYAWRRC IRDKNTSEQD LRVQGLPTVC FTWRQLQAAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSHQG NREFVNEIGM ISGLNHPNLV KLYGCCVEKN QLMLVYEYME NNSLAHMLHG KSSLNLDWKA RQKICVGIAR GLEFLHEGSM IRMVHRDIKT
0801: TNVLLDADLN AKISDFGLAR LHEEEHSHIS TKIAGTIGYM APEYALWGQL SEKADVYSFG IVAMEIVSGQ SNTKQKGSAD HVSLINWAVK LQQKGDITEI
0901: VDPVLQGDFN TKEAARMIKV AIVCTNSSPS LRPTMSEAVQ MLEGEVEITQ VLSDPGLYGH NWSISNLRDI DTDGGLSTSV VTDQTATTMK SSVSGCDLYP
1001: LYPESMILNS TVDFSSSSL
Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)
0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL
Arabidopsis Description
RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.