CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 3
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43183	Canola	mitochondrion, plasma membrane	96.65	95.11
CDY72653	Canola	cytosol	23.79	83.06
CDY35283	Canola	cytosol, plasma membrane, plastid	56.81	77.0
CDX94698	Canola	plasma membrane	34.64	76.14
CDY35293	Canola	cytosol	70.21	75.34
CDY43181	Canola	cytosol	54.16	74.21
CDY49080	Canola	cytosol	41.11	73.1
CDX94701	Canola	cytosol	59.01	71.57
CDY28419	Canola	mitochondrion, plasma membrane	68.71	71.0
CDX67411	Canola	plasma membrane	56.81	69.3
CDX99849	Canola	plasma membrane	75.64	64.92
CDY35284	Canola	plasma membrane	75.87	64.54
AT1G29720.1	Thale cress	plasma membrane	75.75	64.38
CDY26317	Canola	plasma membrane	75.29	64.36
CDY44292	Canola	plasma membrane	72.52	63.56
CDX99848	Canola	plasma membrane	74.71	63.49
CDY13695	Canola	plasma membrane	74.48	63.11
CDY26319	Canola	plasma membrane	72.86	62.11
CDX94692	Canola	plasma membrane	71.02	61.87
CDX77648	Canola	cytosol	30.25	60.23
CDX73325	Canola	plasma membrane	67.21	58.55
CDY67674	Canola	cytosol	47.69	56.04
CDY35292	Canola	plasma membrane	72.4	55.93
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	30.25	55.63
CDX73324	Canola	nucleus	1.96	54.84
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	33.49	49.49
CDX98146	Canola	plasma membrane	55.77	48.3
CDY43187	Canola	plasma membrane	55.66	48.1
CDX98148	Canola	plasma membrane	56.12	47.79
CDY67675	Canola	cytosol	7.04	47.29
VIT_10s0003g01990.t01	Wine grape	plasma membrane	48.73	45.97
CDY43185	Canola	plasma membrane	55.08	44.45
CDX97605	Canola	plasma membrane	45.27	42.75
CDX81476	Canola	cytosol	13.63	41.55
CDX93632	Canola	plasma membrane	48.04	41.11
CDX95138	Canola	plasma membrane	47.81	40.91
CDX75790	Canola	peroxisome	44.23	40.79
CDX98497	Canola	cytosol, plasma membrane, plastid	45.38	40.52
CDY35279	Canola	plasma membrane	46.77	39.94
CDX90208	Canola	plasma membrane	46.77	39.94
CDX82464	Canola	plasma membrane	43.88	39.01
CDX75792	Canola	plasma membrane	43.65	38.81
CDX98501	Canola	plasma membrane	45.61	38.73
CDY26316	Canola	plasma membrane	45.38	38.64
CDX99850	Canola	plasma membrane	45.38	38.64
CDX97606	Canola	plasma membrane	45.5	38.63
CDY20088	Canola	plasma membrane	45.38	38.57
CDX75791	Canola	plasma membrane	45.03	38.42
CDX82465	Canola	plasma membrane	44.8	38.23
CDX82466	Canola	plasma membrane	44.69	37.94
CDY60204	Canola	plasma membrane	45.27	37.55
CDY32338	Canola	plasma membrane	44.46	37.41
CDY25853	Canola	plasma membrane	44.8	37.16
CDX90205	Canola	plasma membrane	75.29	37.15
CDX97610	Canola	plasma membrane	44.69	34.22
CDX67736	Canola	plasma membrane	37.88	32.67
CDX98288	Canola	plasma membrane	37.76	32.57
CDY59119	Canola	plasma membrane	37.64	32.47
CDY42407	Canola	plasma membrane	38.45	32.24
CDY10509	Canola	plasma membrane	38.11	32.13
CDY25239	Canola	plasma membrane	34.18	32.03
CDY10508	Canola	plasma membrane	38.11	31.95
CDY47811	Canola	plasma membrane	37.3	31.82
CDY46490	Canola	plasma membrane	37.07	31.59
CDY22357	Canola	plasma membrane	36.95	31.53
CDY68250	Canola	plasma membrane	36.95	31.5
CDY12693	Canola	plasma membrane	33.6	29.01
CDY38804	Canola	golgi, plasma membrane	18.36	24.88
CDY11604	Canola	plasma membrane	17.9	24.26
CDY03757	Canola	plasma membrane	38.22	16.2
CDY43003	Canola	plasma membrane	38.34	15.82

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078E5K1
EnsemblPlants:CDX94703	ProteinID:CDX94703	ProteinID:CDX94703.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00158072001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Malectin	PFAM:PF07714	PFAM:PF11721	PFAM:PF13855
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF54	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0004EE11A5	SEG:seg	:	:	:

Description

BnaC07g09550D

Coordinates

chrLK031883:-:1403622..1408894

Molecular Weight (calculated)

96086.9 Da

IEP (calculated)

6.964

GRAVY (calculated)

-0.212

Length

866 amino acids

Sequence
(BLAST)

001: MRVCSPLCRN LVRNYLSGTI PVEWASMPYI TSITLSANNL SVFLPTWLQN FKNLKILGIE GNQFSGTIPD ELGNLTNLTK LHLASNKFIG RLPVTLARLV
101: NLEEFWISDN NFNGTIPGYI GTWSRLQKLF LHASGLKGPL PEAVARLENL VDLILRNVGL SGSVPSYIWN MSKLNRLDLS FNKLTGELQE VQKAPPHTYL
201: TNNMLSGNVE SASVYLHSKS VIDLSYNNFS WSSSCRDKRL LPCAGPTNCS KYQRSLHINC GGGNVQIKNS SGKITYQADN STTDAATNHH LENWGISNTG
301: DFTDDTSHDD TYIISTNLTP SGDYPDLFKT ARRSPLSLVY YAFCLENGAY NVKLHFTEIQ FLDEELNSRL GRRIFDVYVQ GELFLRDFNI KEEDNGTLKP
401: VVKEAKAVNV TDHTLEIRLY WAGKGTVLFP KRGNYGPLIS AISLCHSKNT SPMPMEKTKY NTNYPLIFGV TGALVAIILL ALGLYAQKRC RGDTNMRERD
501: LRAQCLQTVW FTWRQLQPAT NNFDQANKLG EGGFGSVFKG ELTDGTIVAV KQLSSKSRQG NREFGNEIGM ISGLNHPNLV KLYGCCVEKN QLLLVYEYME
601: NNSLALVLSE KSSPKLDWAA RKKISVGIAR GLEFLHEGSM IKMVHRDIKT TNVLLDADLN AKISDFGLAR LCEEEHTQIT TKIAGTMGYM APEYVLWGQL
701: TEKADVYSFG VVAMEIVSGK SNTKPRGSAD HVSLINWALM LQQKGDILEI VDPTLEGDFN SKEAVRMINV ALVCTNSSPS LRPTMSEVVQ MLEGVIEIAQ
801: VMSDPGLYGD DWSMSKLKDN DTHGSSSMSG VTDQTTMTMK FSVSGSDLYP ESVISNSTVE FPSSSV

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.