Factsheet for VIT_10s0003g02020.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77648	Canola	cytosol	47.35	51.26
CDY72653	Canola	cytosol	26.33	50.0
Bra034418.1-P	Field mustard	cytosol, plasma membrane, plastid	50.74	47.33
CDX94698	Canola	plasma membrane	39.07	46.7
CDY49080	Canola	cytosol	47.56	46.0
Bra028415.1-P	Field mustard	cytosol, plasma membrane, plastid	47.98	45.84
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	53.72	43.17
VIT_19s0014g00750.t01	Wine grape	plasma membrane	43.52	43.07
CDY43181	Canola	cytosol	54.56	40.66
VIT_10s0003g02000.t01	Wine grape	plasma membrane	62.21	40.47
CDY35283	Canola	cytosol, plasma membrane, plastid	54.56	40.22
VIT_10s0003g01860.t01	Wine grape	plastid, vacuole	57.75	39.59
VIT_19s0014g00530.t01	Wine grape	plasma membrane	38.43	36.71
Bra030169.1-P	Field mustard	plastid	49.68	36.45
VIT_10s0003g01990.t01	Wine grape	plasma membrane	70.49	36.17
CDX94701	Canola	cytosol	54.78	36.13
Bra030166.1-P	Field mustard	plasma membrane	54.99	35.72
VIT_00s0125g00210.t01	Wine grape	cytosol	43.95	34.67
CDX67411	Canola	plasma membrane	52.02	34.51
Bra032331.1-P	Field mustard	cytosol	51.59	34.32
CDY67674	Canola	cytosol	52.23	33.38
Bra010817.1-P	Field mustard	plasma membrane	53.5	33.25
VIT_10s0003g01940.t01	Wine grape	plasma membrane, plastid, vacuole	54.56	32.82
Bra030161.1-P	Field mustard	plasma membrane	49.68	32.77
CDY35293	Canola	cytosol	54.78	31.97
Bra010816.1-P	Field mustard	plasma membrane	52.44	31.95
Bra030168.1-P	Field mustard	mitochondrion, plasma membrane	55.84	31.27
CDY28419	Canola	mitochondrion, plasma membrane	54.56	30.67
CDX94703	Canola	plasma membrane	55.63	30.25
CDY43183	Canola	mitochondrion, plasma membrane	55.41	29.66
Bra030170.1-P	Field mustard	plasma membrane	47.56	29.24
VIT_19s0014g00790.t01	Wine grape	cytosol, nucleus, plasma membrane	54.35	29.09
VIT_10s0003g01880.t01	Wine grape	cytosol	56.69	27.75
VIT_10s0003g01920.t01	Wine grape	plasma membrane	55.84	27.74
Bra030174.1-P	Field mustard	plasma membrane	55.84	27.51
VIT_19s0014g00470.t01	Wine grape	plasma membrane	58.17	27.21
VIT_10s0003g01980.t01	Wine grape	cytosol	58.39	27.12
VIT_00s0125g00140.t01	Wine grape	cytosol	40.13	27.12
VIT_19s0014g00520.t01	Wine grape	plasma membrane	58.17	27.1
VIT_19s0014g00500.t01	Wine grape	plasma membrane	58.6	26.95
Bra030167.1-P	Field mustard	plasma membrane	54.78	26.49
VIT_12s0028g01350.t01	Wine grape	plasma membrane	56.69	26.41
CDY44292	Canola	plasma membrane	55.2	26.32
CDY43187	Canola	plasma membrane	55.84	26.25
CDX98146	Canola	plasma membrane	55.63	26.2
AT1G29720.1	Thale cress	plasma membrane	56.26	26.01
Bra032332.1-P	Field mustard	plasma membrane	52.23	25.79
VIT_19s0014g00680.t01	Wine grape	plasma membrane	55.84	25.76
CDY13695	Canola	plasma membrane	55.84	25.73
CDX98148	Canola	plasma membrane	55.41	25.66
AT1G29730.2	Thale cress	plasma membrane	54.14	25.47
CDY35284	Canola	plasma membrane	54.56	25.25
CDY26319	Canola	plasma membrane	54.35	25.2
VIT_19s0014g00810.t01	Wine grape	plasma membrane, plastid	54.56	25.2
CDX94692	Canola	plasma membrane	52.44	24.85
CDX99848	Canola	plasma membrane	53.5	24.73
CDX99849	Canola	plasma membrane	52.65	24.58
CDY26317	Canola	plasma membrane	52.44	24.38
CDY43185	Canola	plasma membrane	55.2	24.23
AT1G29740.1	Thale cress	plasma membrane	54.99	24.03
CDY35292	Canola	plasma membrane	52.65	22.12
VIT_10s0092g00470.t01	Wine grape	cytosol	43.52	20.67
VIT_10s0092g00710.t01	Wine grape	plasma membrane	43.52	20.44
VIT_00s0125g00090.t01	Wine grape	plasma membrane	42.89	20.2
VIT_12s0055g00580.t01	Wine grape	plasma membrane	43.95	20.08
VIT_10s0092g00590.t01	Wine grape	plasma membrane	43.52	19.56
VIT_10s0003g01900.t01	Wine grape	plasma membrane	60.72	18.93
VIT_19s0014g00830.t01	Wine grape	plasma membrane	56.05	16.12
CDX90205	Canola	plasma membrane	53.93	14.47
VIT_12s0055g00590.t01	Wine grape	plasma membrane	44.16	9.88
CDY67675	Canola	cytosol	0.0	0.0
KRH75936	Soybean	extracellular	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	Gene3D:2.60.120.430	MapMan:50.2.7	ProteinID:CCB55729	ProteinID:CCB55729.1	UniProt:F6HME0
EMBL:FN595992	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Malectin
PFAM:PF00069	PFAM:PF11721	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF97	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0002108527	ArrayExpress:VIT_10s0003g02020	EnsemblPlantsGene:VIT_10s0003g02020	EnsemblPlants:VIT_10s0003g02020.t01	SEG:seg

Description

No Description!

Coordinates

chr10:+:3643853..3657896

Molecular Weight (calculated)

52437.5 Da

IEP (calculated)

8.286

GRAVY (calculated)

-0.076

Length

471 amino acids

Sequence
(BLAST)

001: MTARKAPLSL TYFGFCLKNG DYNVRLHFAE IEFKDEEAYS KLGRRIFNIY IQGKLVWEDF NIMEEANGIG KEVIKQSNVT VTNNTLEIRL YWAGKGTTCI
101: PKRGRYGPLI SAISICPSKL NIHEPLLSKL VQLLQLIIVC SFFMFNFPYK KVTIVGVATS VSCLILFVLG VLCWKYYFGG KNMMEKELRG LDLQTGSFTL
201: RQIKAATNNF DYANKIGEGG FGSVYKGQLS DGTVIAVKQL SSKSRQGNRE FGLTFLHEES RIMIVHRDIK ATNVLLDENL NAKISDFGLA KLNEGENTHI
301: STRIAGTIGY MAPEYALWGY LTDKADVYSF GVVTLEIVSG KNNSNYTPDT TCTCLLDWAF VLKQKGSLME LVDPNLGTEF NKKEAETMIK VALLCTNASS
401: KLRPTMSAVL RMLEGQDIIP EVISDPSIYG KDMRISPLRD HYQHMEMQSS SGSLAPNFSL DGAQVGSSSS A

Best Arabidopsis Sequence Match ( AT1G29740.1 )
(BLAST)

0001: MSAAYKLMIM SRSRLFSSLL SVLTLIYLVC TVLSASPSLH PDEVEALKDI ALTLGVKHLN LSEDPCLTKT LVITQDVLKE GQNSTIRCDC HFNNNNTCHI
0101: THFVLKTFSL PGRLPPEFSK LRYLEFIDLC RNYLYGSIPM EWASLPYLKS ISVCANRLTG DIPKGLGKFI NLTQLGLEAN QFSGTIPKEL GNLVNLEGLA
0201: FSSNQLVGGV PKTLARLKKL TNLRFSDNRL NGSIPEFIGN LSKLQRLELY ASGLKDPIPY SIFRLENLID LRISDTAAGL GQVPLITSKS LKFLVLRNMN
0301: LTGPIPTSLW DLPNLMTLDL SFNRLTGEVP ADASAPKYTY LAGNMLSGKV ESGPFLTAST NIDLSYNNFT WSQSCKERNN INTYASSRST NSLTRLLPCS
0401: AINLCQNYNR SLHINCGGPD VTIENSRGRF LYEGDNYGLT GSATNYYGKN WGFSNTGDFM DDAITEDTYT VSSESAVSAK YPDLYQNARR SPLSLAYFAI
0501: CFENGSYNVK LHFAEIQFSD EEPFSRLAKR VFNIYVQGKL IWEDFSIREE ANGTHKEVIK EVNTTVTDNT LEIRLYWAGK GTTIIPKRGN YGSLISAISV
0601: CPSSESECGV PVQIHPVTKQ QHKQRKYHLI LGIAALIVSL SFLILGALYW RICVSNADGE KRGSFSLRQL KVATDDFNPL NKIGEGGFGS VYKGRLPNGT
0701: LIAVKKLSSK SCQGNKEFIN EIGIIACLQH PNLVKLYGCC VEKTQLLLVY EYLENNCLAD ALFGRSGLKL DWRTRHKICL GIARGLAFLH EDSAVKIIHR
0801: DIKGTNILLD KDLNSKISDF GLARLHEDDQ SHITTRVAGT IGYMAPEYAM RGHLTEKADV YSFGVVAMEI VSGKSNANYT PDNECCVGLL DWAFVLQKKG
0901: AFDEILDPKL EGVFDVMEAE RMIKVSLLCS SKSPTLRPTM SEVVKMLEGE TEIEEIISDP GAYGDELRFK KTAEIGSSSL PSDYLVSITS SCESAYDLYP
1001: LSPDQLCRRY HPLRRKEHHD DTSRWLRPEL DNGAYIAALL LPQRDDFEVC DSVIFWLSSI ISGQREIRQI ADIKNSDD

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I337]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.