Factsheet for Bra032332.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26317	Canola	plasma membrane	97.06	91.41
Bra010817.1-P	Field mustard	plasma membrane	58.8	74.01
Bra034418.1-P	Field mustard	cytosol, plasma membrane, plastid	39.1	73.86
Bra028415.1-P	Field mustard	cytosol, plasma membrane, plastid	38.16	73.83
Bra032331.1-P	Field mustard	cytosol	53.77	72.46
Bra030168.1-P	Field mustard	mitochondrion, plasma membrane	62.58	70.99
Bra030166.1-P	Field mustard	plasma membrane	53.14	69.93
AT1G29720.1	Thale cress	plasma membrane	72.22	67.62
Bra010816.1-P	Field mustard	plasma membrane	54.61	67.4
Bra030161.1-P	Field mustard	plasma membrane	49.79	66.53
Bra030167.1-P	Field mustard	plasma membrane	64.67	63.35
Bra030170.1-P	Field mustard	plasma membrane	42.87	53.39
Bra030174.1-P	Field mustard	plasma membrane	53.25	53.14
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	25.79	52.23
VIT_10s0003g01990.t01	Wine grape	plasma membrane	47.69	49.56
Bra030169.1-P	Field mustard	plastid	32.6	48.44
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	28.83	46.93
Bra018693.1-P	Field mustard	plasma membrane	47.59	45.4
Bra001566.1-P	Field mustard	plasma membrane	45.18	43.76
Bra027307.1-P	Field mustard	plasma membrane	44.65	42.14
Bra027306.1-P	Field mustard	plasma membrane	39.31	41.99
Bra001567.1-P	Field mustard	plasma membrane	44.65	41.97
Bra032333.1-P	Field mustard	plasma membrane	35.74	41.94
Bra021579.1-P	Field mustard	plasma membrane	44.55	41.71
Bra038124.1-P	Field mustard	plasma membrane	44.03	41.22
Bra007908.1-P	Field mustard	cytosol	27.46	37.54
Bra003333.1-P	Field mustard	plasma membrane	37.42	35.56
Bra007909.1-P	Field mustard	plasma membrane	37.0	34.85
Bra030815.1-P	Field mustard	plasma membrane	37.21	34.63
Bra035966.1-P	Field mustard	plasma membrane	36.37	34.15
Bra030813.1-P	Field mustard	plasma membrane	37.32	33.9
Bra033670.1-P	Field mustard	plasma membrane	36.06	33.89
Bra007907.1-P	Field mustard	plasma membrane	35.53	33.01
Bra033958.1-P	Field mustard	plasma membrane	33.44	32.52
Bra016226.1-P	Field mustard	plasma membrane	15.41	26.63

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra032332
EnsemblPlants:Bra032332.1	EnsemblPlants:Bra032332.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M4EU50	InterPro:Malectin	PFAM:PF00069	PFAM:PF11721
PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF55
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000254263D	SEG:seg	:	:

Description

AT1G29720 (E=9e-219) | protein kinase family protein

Coordinates

chrA09:+:22467313..22472845

Molecular Weight (calculated)

106138.0 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.117

Length

954 amino acids

Sequence
(BLAST)

001: MTWIVFSALL FFTIITSLSV IQTTSTSPAL HPDELNALEK IATTLGIKRV NLSHEDPCSS GTLMITQQVD FAWNPEVNNT IACNCSFNNN TTCHITELVL
101: RNFTLEGKLP PDLAKLRYLQ SIDLSANYLT GTIPVEWASM SHLILISLSG NSLSGSLPTW LQNLKNLKFL GLEGNQFSGP IPDEIGNLTN LERLYLSSNQ
201: FTGSLPITLA KLVNLERFWI CDNNFSGTFP AYMGNWSQLK RLYLYASGLK GPIPDAVASL ENLTDLRISD TTGIDSFPIL SSKVIDTLIL RNLNLSGPIP
301: SYIWSLPILK RLDLSFNKLT GEVQDIHKAP KFTYLAGNML TGNFESAFFF NNKPNISLHI NCGGGTVQIT NSSRRITYQA DNNKVLAATN LHMEGWGISN
401: TGDFTDDTSD DDTFIISTSL RISGGSPDIY KTARRSALSL VYYAFCLENG AYNVKLHFME IQFSDKEVYS RIGRRIFDVY VQGELFLKDF NIKDEANGTL
501: NPVVKELKAV NVTDHMLEIR LYWAGKGTTF IPNRGYYGPL ISAISLCHTE KIKHHINYPL VLGATGAFVT TTLLALGIYA WRRRREDKIT RERDLRSESL
601: QTVCYTWKQL KAATNNFDQA NKLGEGGFGA VFKGQLPDGT IIAVKQLSSK SHQGNREFVN EIGMISGLNH PNLVKLYGCC VEKNQLLLVY EYMQNNSLAL
701: VLHEKSSLKL DWVARKKICV GIAKGLEFLH EGSMIRMVHR DIKTSNVLLD ADLNAKISDF GLARLHQEEN THISTKVAGT MGYMAPEYVL WGQLTEKVDV
801: YSFGVVVMEI VSGQSNTKHK GSDDDEVSLI NWALTLQQKG DILEIVDPML EGEFNSKEAA RMINVALVCT NSSPSMRPTM SEAVQMLEGV IEIKEVMPDS
901: GLYGHDWSMS KLMHIDTRGR SSTSGVTDQT ETSMKSSVSG FDLYQYPSSS LECP

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.