Factsheet for Bra030161.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034418.1-P	Field mustard	cytosol, plasma membrane, plastid	51.82	73.27
CDY44292	Canola	plasma membrane	95.8	69.23
Bra028415.1-P	Field mustard	cytosol, plasma membrane, plastid	47.48	68.76
Bra030166.1-P	Field mustard	plasma membrane	64.43	63.45
Bra032331.1-P	Field mustard	cytosol	62.18	62.71
Bra010816.1-P	Field mustard	plasma membrane	64.43	59.51
Bra010817.1-P	Field mustard	plasma membrane	62.75	59.1
Bra030168.1-P	Field mustard	mitochondrion, plasma membrane	62.47	53.03
Bra030167.1-P	Field mustard	plasma membrane	70.59	51.75
Bra032332.1-P	Field mustard	plasma membrane	66.53	49.79
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	32.77	49.68
AT1G29720.1	Thale cress	plasma membrane	70.73	49.56
Bra030169.1-P	Field mustard	plastid	41.18	45.79
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	37.25	45.39
Bra030170.1-P	Field mustard	plasma membrane	47.2	43.99
Bra030174.1-P	Field mustard	plasma membrane	53.22	39.75
Bra032333.1-P	Field mustard	plasma membrane	42.44	37.27
VIT_10s0003g01990.t01	Wine grape	plasma membrane	47.62	37.04
Bra007908.1-P	Field mustard	cytosol	34.45	35.24
Bra027306.1-P	Field mustard	plasma membrane	39.08	31.24
Bra001566.1-P	Field mustard	plasma membrane	42.02	30.46
Bra018693.1-P	Field mustard	plasma membrane	42.58	30.4
Bra027307.1-P	Field mustard	plasma membrane	42.58	30.07
Bra021579.1-P	Field mustard	plasma membrane	42.44	29.73
Bra001567.1-P	Field mustard	plasma membrane	41.88	29.46
Bra038124.1-P	Field mustard	plasma membrane	41.18	28.85
Bra003333.1-P	Field mustard	plasma membrane	36.27	25.8
Bra007909.1-P	Field mustard	plasma membrane	36.41	25.67
Bra030815.1-P	Field mustard	plasma membrane	36.55	25.46
Bra035966.1-P	Field mustard	plasma membrane	36.13	25.39
Bra033670.1-P	Field mustard	plasma membrane	35.85	25.22
Bra030813.1-P	Field mustard	plasma membrane	36.69	24.95
Bra007907.1-P	Field mustard	plasma membrane	35.29	24.54
Bra033958.1-P	Field mustard	plasma membrane	32.63	23.75
Bra016226.1-P	Field mustard	plasma membrane	13.31	17.21

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra030161	EnsemblPlants:Bra030161.1
EnsemblPlants:Bra030161.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4EMZ1	InterPro:Malectin	PFAM:PF07714	PFAM:PF11721
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF55	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002541024
SEG:seg	:	:	:	:	:

Description

AT1G29720 (E=9e-139) | protein kinase family protein

Coordinates

chrA07:+:6121074..6130712

Molecular Weight (calculated)

79159.0 Da

IEP (calculated)

6.668

GRAVY (calculated)

-0.136

Length

714 amino acids

Sequence
(BLAST)

001: MSTVFSILHL KITIIISFFA ISTTYASSDL HPDELNVLEN ITTTLGGKGL NLSYGDPCKL KFLKIDQKIG DPEIKNTILC DVCFNSTCHI TKIDLSFNKL
101: TGEVNGDEAP KYTADYSGVL SYRTGLLPCA GPVNCTDYQG FLHINCGGGN IVITNSSYET TYEADNNVTT AATSQHFKNW GISNTGEFSD DDQENDIYFS
201: STLSRDPSEL YKTARRSALS LVYYAFCLKN GTYNVKLHFM ETQFSDEEPY SRLGIRIFDV FVQGELFLKD FNIKKEATGT LKPIVKEKKV NVTNHMLEIR
301: LYWAGKGTTL IPRRGNYGPL ISAISLCHQI EKKKHHTDYP LIFGVSGSVI AITLLALGLY AQKRCRGDKN TREREDKFFS NIMSVTVFLV SDMRNLMQGE
401: LSDGTIIAVK QLSAKSCQGN REFVNEIGMI SGLSHPNLVK LYGCCVEKIQ LLLVYEYMEN NSLALALSGK SSLKLDWAAR QNICIGIAKG LEFLHEGSMI
501: RMVHRDIKST NVLLDSDLNA KISDFGLARL HEEDHSHIST KIAGTIGYMA PEYALWGQLT EKADVYSFGV VAMEIVSGKS NTKQKGIVDH VSLINWALTL
601: QQTGDIMKIV DPRLEGHFNI KEAVRMIKVA FVCTNSSPSL RPAMSEAVQM LEGEIEITQV MSDPGLYDHN LSISKLRGTD AHGSSSTSGL TDQTTTTMKS
701: SVSSCDLYPL YLNP

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.