Factsheet for Bra010816.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35283	Canola	cytosol, plasma membrane, plastid	73.48	88.89
Bra034418.1-P	Field mustard	cytosol, plasma membrane, plastid	50.97	78.02
Bra028415.1-P	Field mustard	cytosol, plasma membrane, plastid	47.99	75.25
Bra030166.1-P	Field mustard	plasma membrane	68.69	73.24
Bra032331.1-P	Field mustard	cytosol	62.1	67.8
Bra010817.1-P	Field mustard	plasma membrane	64.42	65.7
Bra030161.1-P	Field mustard	plasma membrane	59.51	64.43
Bra030168.1-P	Field mustard	mitochondrion, plasma membrane	68.56	63.02
AT1G29720.1	Thale cress	plasma membrane	72.7	55.15
Bra032332.1-P	Field mustard	plasma membrane	67.4	54.61
Bra030167.1-P	Field mustard	plasma membrane	67.01	53.18
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	31.95	52.44
Bra030169.1-P	Field mustard	plastid	39.72	47.82
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	35.83	47.27
Bra030170.1-P	Field mustard	plasma membrane	44.24	44.65
Bra030174.1-P	Field mustard	plasma membrane	52.13	42.15
VIT_10s0003g01990.t01	Wine grape	plasma membrane	47.87	40.3
Bra032333.1-P	Field mustard	plasma membrane	41.14	39.11
Bra007908.1-P	Field mustard	cytosol	34.54	38.25
Bra027306.1-P	Field mustard	plasma membrane	41.4	35.83
Bra001566.1-P	Field mustard	plasma membrane	44.37	34.82
Bra018693.1-P	Field mustard	plasma membrane	45.02	34.8
Bra027307.1-P	Field mustard	plasma membrane	44.63	34.12
Bra021579.1-P	Field mustard	plasma membrane	44.11	33.46
Bra001567.1-P	Field mustard	plasma membrane	43.47	33.1
Bra038124.1-P	Field mustard	plasma membrane	43.47	32.97
Bra007909.1-P	Field mustard	plasma membrane	37.9	28.92
Bra003333.1-P	Field mustard	plasma membrane	36.74	28.29
Bra035966.1-P	Field mustard	plasma membrane	37.13	28.25
Bra030815.1-P	Field mustard	plasma membrane	37.39	28.2
Bra033670.1-P	Field mustard	plasma membrane	37.0	28.18
Bra030813.1-P	Field mustard	plasma membrane	37.77	27.81
Bra007907.1-P	Field mustard	plasma membrane	35.96	27.07
Bra033958.1-P	Field mustard	plasma membrane	33.51	26.4
Bra016226.1-P	Field mustard	plasma membrane	11.9	16.67

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra010816
EnsemblPlants:Bra010816.1	EnsemblPlants:Bra010816.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	UniProt:M4D2W3
InterPro:Malectin	PFAM:PF00069	PFAM:PF11721	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF54	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00025470DE	:	:

Description

AT1G29720 (E=4e-140) | protein kinase family protein

Coordinates

chrA08:+:16590265..16603216

Molecular Weight (calculated)

85700.7 Da

IEP (calculated)

6.816

GRAVY (calculated)

-0.181

Length

773 amino acids

Sequence
(BLAST)

001: MDLPGKLPPQ LVKLRYLQSI GVEANQFSGP IPDELGNLSN LTVLILRNVS MSGPIPSYIW SKLYLRNLDL SFNKLTGDVN GVRAPYYTYL TGNRLSGDIE
101: FDGFLNSKSN ITGLLPCAGP INCTSYRRFL HINCGGDSIV TTNSSYKITY EADNNVTKAA TNQHIKNWGI SNTGDFMDDD INDDAYTIST SMTPLGDSHG
201: LYKTARRSAL SLVYYAFCLE NGDYNVSLHF MEIQFSEPHG SLGRRIFDVY VQGKLFLRDF NIKEEAKGNL KPVIKELKAV DVTDHMLEVR LYWAGKGTTM
301: IPKSPCVTPV CIWTWATIGR PAHLTPLLID RFRLLYQSFL EKPNWLDPTA EKIKHHIRYP LIVGGTGALV TIILLALGIY GRRRCRADNN TRERDLRAQG
401: LQTLCFTWRQ LQAATNDFDQ ANKLGEGGFG SVFKGELSDG TIIAVKQLSS KSCQGNREFV NEIGMISGLN HPNLVKLYGC CVEKEQLLLV YEYMENNSLA
501: LALSGKSATK LEWAMRQKIC VGIARGLAFL HEGSIVRMVH RDIKTTNVLL DADLNAKISD FGLARLHEEE HTHISTKIAG TIGYMAPEYA LWGQLTEKAD
601: VYSFGVVAIE IVSGKSNTKH KGSADHVSLI NWTTFTSESQ ALMLQQTGDI MDIVDPVLEG DFNSKEAVRM IKVALVCTHS SPSLRPTMSE AVQMLEGEIE
701: VTQVMSDHGL YGHNWSISKM RDVDTHGSSS TSGVTDHQTE STMKSSVSGS DLYPSYPESV ILKSTVELPS SSM

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.