Factsheet for Bra030166.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034418.1-P	Field mustard	cytosol, plasma membrane, plastid	56.28	80.79
Bra028415.1-P	Field mustard	cytosol, plasma membrane, plastid	51.86	76.27
Bra032331.1-P	Field mustard	cytosol	68.55	70.2
Bra010816.1-P	Field mustard	plasma membrane	73.24	68.69
Bra030161.1-P	Field mustard	plasma membrane	63.45	64.43
CDY13695	Canola	plasma membrane	90.76	64.38
Bra030168.1-P	Field mustard	mitochondrion, plasma membrane	73.52	63.38
Bra010817.1-P	Field mustard	plasma membrane	65.38	62.53
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	35.72	54.99
Bra030167.1-P	Field mustard	plasma membrane	71.45	53.18
Bra032332.1-P	Field mustard	plasma membrane	69.93	53.14
AT1G29720.1	Thale cress	plasma membrane	74.48	52.99
GSMUA_Achr6P25980_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	39.59	48.98
Bra030169.1-P	Field mustard	plastid	42.62	48.13
Bra030170.1-P	Field mustard	plasma membrane	48.69	46.08
Bra030174.1-P	Field mustard	plasma membrane	54.76	41.53
VIT_10s0003g01990.t01	Wine grape	plasma membrane	50.07	39.54
Bra007908.1-P	Field mustard	cytosol	36.14	37.54
Bra032333.1-P	Field mustard	plasma membrane	41.24	36.78
Bra027306.1-P	Field mustard	plasma membrane	42.62	34.6
Bra018693.1-P	Field mustard	plasma membrane	46.62	33.8
Bra001566.1-P	Field mustard	plasma membrane	45.66	33.6
Bra027307.1-P	Field mustard	plasma membrane	46.34	33.23
Bra021579.1-P	Field mustard	plasma membrane	45.66	32.48
Bra001567.1-P	Field mustard	plasma membrane	45.1	32.22
Bra038124.1-P	Field mustard	plasma membrane	45.1	32.09
Bra003333.1-P	Field mustard	plasma membrane	39.31	28.39
Bra007909.1-P	Field mustard	plasma membrane	38.34	27.44
Bra030815.1-P	Field mustard	plasma membrane	38.34	27.12
Bra007907.1-P	Field mustard	plasma membrane	38.21	26.97
Bra030813.1-P	Field mustard	plasma membrane	38.9	26.86
Bra035966.1-P	Field mustard	plasma membrane	37.52	26.77
Bra033670.1-P	Field mustard	plasma membrane	37.38	26.7
Bra033958.1-P	Field mustard	plasma membrane	34.07	25.18
Bra016226.1-P	Field mustard	plasma membrane	12.83	16.85

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra030166
EnsemblPlants:Bra030166.1	EnsemblPlants:Bra030166.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	UniProt:M4EMZ6
InterPro:Malectin	PFAM:PF00069	PFAM:PF11721	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF54	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000254101F	:	:

Description

AT1G29720 (E=6e-233) | protein kinase family protein

Coordinates

chrA07:+:6031444..6035981

Molecular Weight (calculated)

80170.1 Da

IEP (calculated)

7.563

GRAVY (calculated)

-0.129

Length

725 amino acids

Sequence
(BLAST)

001: MINRYLYASG LKGPIPDEIA RLENLTNLIL RNVSLSGPIP SYIWNMPKLR ILDLSFNNLT GDVHGGRAPA YTYLTGNRLS GEVESGVFLK SNAHITGILP
101: CAGPINCTSY QRTLHINCGG DNIVITKSSH KITYQADNTK TEAATNQQFK DWGISNTGEF FSDGYTKATS NTDDTYIIST SLRLSGDSPN IYKSARRSPL
201: SLVYYAFCME NGTYSVKLHF MEIQFSDQEL YSRLGRRIFD VYVQGVLFLR DFNIKEAANG TLKPVVKTVS ANVTNNILEI RLYWAGKGTT LIPERGNYGP
301: LISAISLCHS TTKTELHTNY PLIFGVVGSL IAVTLLALGL YTQKICIRDK YTRERDLRAQ GLQTVCFTWR QLEAATNNFD QANKLGEGGF GSVFRGELSD
401: GTIIAVKQLS SKSCQGNREF VNEIGMISGL NHPNLVKLYG CCVEKNQLML VYEYMENNSL ALALFGKSSL KLQWEVRQNI CVGIARGLEF LHEGSMIRMV
501: HRDIKTSNVL LDADLNAKIS DFGLARLHEE EHTHISTKIA GTVGYMAPEY ALWGHLTEKA DVFSFGVVAM EIVSGKSNMK RKGSDDHVSL INWALTLHQR
601: GDIMEIVDPV LQRDFNSKEA VRMIKVAFVC TNSSPSLRPT MSEAVKMLEG EINIRAVMSD PGLYGHNWSI SNLINIDTHG SSSVSGVAHQ TATTMQSSVS
701: GSDLYPFCNE SMILNSTAEV SSSPI

Best Arabidopsis Sequence Match ( AT1G29720.1 )
(BLAST)

0001: MSIILWSFFL FFTIILSSLT NITTLASFSS LHADELNALK EIATTLGIKR LNLRDEDPCS SKTLKIIQEV DFVPNLDINN TIGCDCSFNN NTICRITELA
0101: LKTMSLRGKL PPELTKLPYL KSIELCRNYL SGTIPMEWAK MAYLTSISVC ANNLSGNLPA GLQNFKNLTF LGVEGNQFSG PIPDELGNLT SLTGLELASN
0201: KFTGILPGTL ARLVNLERVR ICDNNFTGII PAYIGNWTRL QKLHLYASGL TGPIPDAVVR LENLLELSLS DTTGIKSFPN LSSKGLKRLI LRNVGLSGPI
0301: PSYIWNLTDL KILDLSFNKL NGIVQGVQNP PKNIYLTGNL LSGNIESGGL LNSQSYIDLS YNNFSWSSSC QKGSTINTYQ SSYSKNNLTG LPPCAVPANC
0401: KKYQRFLHIN CGGEEVSIRN SLGKITYQTD NSRQTNAASN QQFDYWGVSN TGDFTDDNSD HDEYYTSTNL TLSGDYPDLY KTARRSALSL VYYAFCLENG
0501: NYNVKLHFME IQFSDKEVYS RLGRRIFDVY VQGKLFLRDF NINKEANGNM KPVIKEINAT VTNHMLEIRL YWAGKGTTLI PKRGNYGPLI SAISLCHSQE
0601: PLCGVEKTKH HIKYPLILGA SGALVTIVLL AVGIYARGIY RRDNNRRERD LRAQGLQTVC FSWRQLQTAT NNFDQANKLG EGGFGSVFKG ELSDGTIIAV
0701: KQLSSKSSQG NREFVNEIGM ISGLNHPNLV KLYGCCVERD QLLLVYEYME NNSLALALFG QNSLKLDWAA RQKICVGIAR GLEFLHDGSA MRMVHRDIKT
0801: TNVLLDTDLN AKISDFGLAR LHEAEHTHIS TKVAGTIGYM APEYALWGQL TEKADVYSFG VVAMEIVSGK SNTKQQGNAD SVSLINWALT LQQTGDILEI
0901: VDRMLEGEFN RSEAVRMIKV ALVCTNSSPS LRPTMSEAVK MLEGEIEITQ VMSDPGIYGH DWSISKLRDI DTHSSSSTSG VTDQTTTTMK SSVSGCDLYP
1001: LYPESMILNS TVENSSSSL

Arabidopsis Description

RFK1Probable LRR receptor-like serine/threonine-protein kinase At1g29720 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASQ6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.