Factsheet for GSMUA_Achr6P25980_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72653	Canola	cytosol	27.82	65.73
GSMUA_Achr4P15520_001	Banana	cytosol	52.56	55.3
KRH75938	Soybean	cytosol	52.56	54.32
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	43.17	53.72
CDX77648	Canola	cytosol	39.08	52.64
CDX94698	Canola	plasma membrane	35.15	52.28
KRH55301	Soybean	cytosol, plasma membrane, vacuole	39.08	50.33
Bra034418.1-P	Field mustard	cytosol, plasma membrane, plastid	43.0	49.9
KRH75931	Soybean	cytosol	53.58	49.84
Bra028415.1-P	Field mustard	cytosol, plasma membrane, plastid	41.81	49.7
CDY49080	Canola	cytosol	40.96	49.28
VIT_19s0014g00530.t01	Wine grape	plasma membrane	40.1	47.67
VIT_10s0003g01860.t01	Wine grape	plastid, vacuole	52.73	44.98
CDY43181	Canola	cytosol	47.78	44.3
CDY35283	Canola	cytosol, plasma membrane, plastid	47.27	43.35
KRH21897	Soybean	cytosol, plasma membrane	53.41	43.17
VIT_10s0003g02000.t01	Wine grape	plasma membrane	51.88	41.99
PGSC0003DMT400073238	Potato	cytosol, nucleus, plasma membrane	52.39	39.77
Bra030166.1-P	Field mustard	plasma membrane	48.98	39.59
Bra030169.1-P	Field mustard	plastid	43.17	39.41
CDX94701	Canola	cytosol	47.78	39.22
CDX67411	Canola	plasma membrane	47.44	39.15
Bra032331.1-P	Field mustard	cytosol	45.39	37.57
Bra030161.1-P	Field mustard	plasma membrane	45.39	37.25
Bra010817.1-P	Field mustard	plasma membrane	46.76	36.15
CDY67674	Canola	cytosol	45.39	36.09
Bra032333.1-P	Field mustard	plasma membrane	50.0	36.04
Bra010816.1-P	Field mustard	plasma membrane	47.27	35.83
CDX97605	Canola	plasma membrane	55.97	35.77
KRH27395	Soybean	cytosol, plasma membrane	54.44	35.6
KRH55298	Soybean	cytosol, nucleus, plasma membrane, plastid	44.88	35.44
CDY35293	Canola	cytosol	48.29	35.07
Bra030168.1-P	Field mustard	mitochondrion, plasma membrane	49.83	34.72
VIT_10s0003g01990.t01	Wine grape	plasma membrane	54.27	34.64
CDX75790	Canola	peroxisome	55.12	34.4
VIT_19s0014g00470.t01	Wine grape	plasma membrane	58.87	34.26
KRH21906	Soybean	endoplasmic reticulum	58.02	34.03
Bra027306.1-P	Field mustard	plasma membrane	51.71	33.93
VIT_19s0014g00520.t01	Wine grape	plasma membrane	58.36	33.83
CDY28419	Canola	mitochondrion, plasma membrane	48.29	33.77
VIT_19s0014g00500.t01	Wine grape	plasma membrane	58.87	33.69
CDX94703	Canola	plasma membrane	49.49	33.49
CDY43183	Canola	mitochondrion, plasma membrane	50.0	33.3
Bra001566.1-P	Field mustard	plasma membrane	55.29	32.89
CDX98497	Canola	cytosol, plasma membrane, plastid	54.27	32.78
VIT_10s0003g01940.t01	Wine grape	plasma membrane, plastid, vacuole	43.69	32.69
GSMUA_Achr6P25940_001	Banana	plasma membrane	54.27	32.58
Bra027307.1-P	Field mustard	plasma membrane	56.14	32.54
KRH27397	Soybean	plasma membrane	55.46	32.37
CDY20088	Canola	plasma membrane	56.14	32.29
Bra021579.1-P	Field mustard	plasma membrane	55.8	32.09
KRH75939	Soybean	plasma membrane	54.44	31.96
VIT_10s0003g01920.t01	Wine grape	plasma membrane	51.71	31.96
VIT_10s0003g01880.t01	Wine grape	cytosol	52.22	31.81
CDX82466	Canola	plasma membrane	55.29	31.76
AT1G53420.1	Thale cress	plasma membrane	51.54	31.69
CDX97606	Canola	plasma membrane	55.12	31.67
VIT_10s0003g01980.t01	Wine grape	cytosol	54.61	31.56
GSMUA_Achr1P04980_001	Banana	plasma membrane	54.1	31.51
Bra030170.1-P	Field mustard	plasma membrane	41.13	31.46
CDY32338	Canola	plasma membrane	55.12	31.39
CDX98501	Canola	plasma membrane	54.44	31.27
CDX82465	Canola	plasma membrane	53.92	31.13
Bra001567.1-P	Field mustard	plasma membrane	53.75	31.03
AT3G14840.2	Thale cress	plasma membrane	53.92	30.98
Solyc02g071880.2.1	Tomato	plasma membrane	52.56	30.95
CDX75792	Canola	plasma membrane	51.02	30.7
KRH21905	Soybean	plasma membrane	54.27	30.7
CDX75791	Canola	plasma membrane	52.9	30.54
CDX82464	Canola	plasma membrane	50.68	30.49
KRH59039	Soybean	plasma membrane	51.19	30.49
Solyc02g071820.2.1	Tomato	nucleus, plasma membrane	51.02	30.23
Solyc02g071810.2.1	Tomato	endoplasmic reticulum	51.19	29.7
CDX90208	Canola	plasma membrane	51.37	29.68
CDY35279	Canola	plasma membrane	51.19	29.59
Bra030174.1-P	Field mustard	plasma membrane	48.12	29.5
CDY44292	Canola	plasma membrane	49.66	29.45
Solyc02g071860.2.1	Tomato	extracellular	49.83	29.35
CDX99850	Canola	plasma membrane	50.68	29.2
CDY26316	Canola	plasma membrane	50.34	29.01
Bra030167.1-P	Field mustard	plasma membrane	48.12	28.95
Bra032332.1-P	Field mustard	plasma membrane	46.93	28.83
CDY35284	Canola	plasma membrane	50.0	28.78
CDY43187	Canola	plasma membrane	49.15	28.74
AT1G29750.2	Thale cress	plasma membrane	50.0	28.7
CDX97610	Canola	plasma membrane	55.29	28.65
KRH21191	Soybean	plasma membrane	49.66	28.64
CDX94692	Canola	plasma membrane	48.46	28.57
CDY13695	Canola	plasma membrane	49.83	28.57
AT1G29730.2	Thale cress	plasma membrane	48.63	28.47
CDX98146	Canola	plasma membrane	48.29	28.3
AT1G29720.1	Thale cress	plasma membrane	48.98	28.16
CDX98148	Canola	plasma membrane	48.63	28.02
CDY26317	Canola	plasma membrane	47.78	27.64
CDX99849	Canola	plasma membrane	47.44	27.55
CDY26319	Canola	plasma membrane	47.44	27.36
CDX99848	Canola	plasma membrane	46.93	26.99
AT1G29740.1	Thale cress	plasma membrane	48.63	26.44
CDY43185	Canola	plasma membrane	47.27	25.82
CDY35292	Canola	plasma membrane	48.81	25.51
VIT_10s0003g01900.t01	Wine grape	plasma membrane	53.92	20.91
GSMUA_Achr8P07040_001	Banana	plasma membrane	38.23	20.86
GSMUA_Achr2P17280_001	Banana	plasma membrane	19.45	18.21
GSMUA_Achr7P16620_001	Banana	cytosol, plasma membrane, plastid	19.28	17.82
GSMUA_Achr2P17300_001	Banana	plasma membrane	19.62	16.69
CDX90205	Canola	plasma membrane	48.12	16.07
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	8.19	9.01
CDY67675	Canola	cytosol	0.85	3.88
KRH75936	Soybean	extracellular	0.17	1.22

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G25980_001	EnsemblPlants:GSMUA_Achr6P25980_001
EnsemblPlants:GSMUA_Achr6T25980_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0TA93	InterPro:Malectin	PFAM:PF00069
PFAM:PF11721	PFAM:PF12330	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF101
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000295F97F
SEG:seg	:	:	:	:	:

Description

Probable LRR receptor-like serine/threonine-protein kinase At1g53430 [Source:GMGC_GENE;Acc:GSMUA_Achr6G25980_001]

Coordinates

chr6:+:26925458..26932629

Molecular Weight (calculated)

64998.1 Da

IEP (calculated)

7.193

GRAVY (calculated)

-0.158

Length

586 amino acids

Sequence
(BLAST)

001: MWLRLLMHLT QGCDNSTYQL LDEHHHLHTP KRQGVFMDNN NDNDAYVVAT SSLKLSMPDS DLFKDARISP VSLTYYGLCL LEGNYSVKLH FAEIKITNDG
101: YGSLGKRIFD IYIQGNLVWK DFNIRDEANG SGNAIIKSTN VMVTDKLEIH LYWAGNGTQS LPVRGTYGPL ISAISVEPNF SLSSGKRTKI IVGIIVSVSC
201: LIFLLLSILW KKGWLGGQTA KDRELRALDL RTGRFTLRQI KMATGNFSAS NKIGEGGFGP VYKGLLPDGT IVAVKQLSSK SKQGNREFLN ELGMISALQH
301: PNLVKLHGCC IEGNQLLLVY EYMENNSLAR ALFGSEEYQL KLDWSTRKNI CIGIAKGLAY IHEESRLKVV HRDIKATNIL LDKNLNAKIS DFGLARLDEE
401: ENTHISTRIA GTVGYMAPEY ATRGYLTEKA DVYSFGVVTL ELVSGTSVMS FRKEGGMHLL DWVQILREEG KLEKFVDPRL GTDFNKEEAI RLINVGLLCI
501: NSSPVPRPPM SAVVSMLVEA QTSIVDATPE QIFSTDDFEI QVSGKRYPSS GDSRTKSILV EGGSVHGSTT SSSDLYPLNL DSLYQN

Best Arabidopsis Sequence Match ( AT1G53430.2 )
(BLAST)

001: MAIQTLRTIF RKLQNQTVNI ERTSCSDQNW NFVVESASNS PTSNITCDCT FNASSVCRVT NIQLKSFSLP GIFPPEFGNL TRLREIDLSR NFLNGTIPTT
101: LSQIPLEILS VIGNRLSGPF PPQLGDITTL TDVNLETNLF TGPLPRNLGN LRSLKELLLS ANNFTGQIPE SLSNLKNLTE FRIDGNSLSG KIPDFIGNWT
201: LLERLDLQGT SMEGPIPPSI SNLTNLTELR ITDLRGQAAF SFPDLRNLMK MKRLGPIPEY IGSMSELKTL DLSSNMLTGV IPDTFRNLDA FNFMFLNNNS
301: LTGPVPQFII NSKENLDLSD NNFTQPPTLS CNQLDVNLIS SYPSVTDNSV QWCLREGLPC PEDAKQSSLF INCGGSRLKI GKDTYTDDLN SRGQSTFSSV
401: SERWGYSSSG VWLGKEDAGY LATDRFNLIN GSTPEYYKTA RLSPQSLKYY GLCLRRGSYK LQLHFAEIMF SNDQTFNSLG RRIFDIYVQG NLLERDFNIA
501: ERAGGVGKPF IRQIDGVQVN GSTLEIHLQW TGKGTNVIPT RGVYGPLISA ITITPNFKVD TGKPLSNGAV AGIVIAACAV FGLLVLVILR LTGYLGGKEV
601: DENEELRGLD LQTGSFTLKQ IKRATNNFDP ENKIGEGGFG PVYKGVLADG MTIAVKQLSS KSKQGNREFV TEIGMISALQ HPNLVKLYGC CIEGKELLLV
701: YEYLENNSLA RALFGTEKQR LHLDWSTRNK ICIGIAKGLA YLHEESRLKI VHRDIKATNV LLDLSLNAKI SDFGLAKLND DENTHISTRI AGTIGYMAPE
801: YAMRGYLTDK ADVYSFGVVC LEIVSGKSNT NYRPKEEFVY LLDWAYVLQE QGSLLELVDP DLGTSFSKKE AMRMLNIALL CTNPSPTLRP PMSSVVSMLE
901: GKIKVQPPLV KREADPSGSA AMRFKALELL SQDSESQVST YARNREQDIS SSSMDGPWVD SSFSEPGKDV SLQQQEEGRS SSSSRKLLDD LTDVKIE

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g53430 [Source:UniProtKB/Swiss-Prot;Acc:C0LGG8]
SUBAcon: [mitochondrion,plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.