Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 8
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g071810.2.1 | Tomato | endoplasmic reticulum | 75.43 | 73.86 |
| Solyc02g071860.2.1 | Tomato | extracellular | 61.58 | 61.21 |
| VIT_10s0003g02000.t01 | Wine grape | plasma membrane | 42.37 | 57.87 |
| VIT_10s0003g01920.t01 | Wine grape | plasma membrane | 54.2 | 56.54 |
| VIT_10s0003g01940.t01 | Wine grape | plasma membrane, plastid, vacuole | 44.19 | 55.81 |
| VIT_10s0003g01980.t01 | Wine grape | cytosol | 52.68 | 51.38 |
| GSMUA_Achr6P25980_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 30.23 | 51.02 |
| Solyc07g055810.2.1 | Tomato | plasma membrane | 49.85 | 48.0 |
| Solyc02g071880.2.1 | Tomato | plasma membrane | 46.21 | 45.93 |
| Solyc12g014350.1.1 | Tomato | endoplasmic reticulum, extracellular | 46.81 | 45.48 |
| Solyc02g071800.2.1 | Tomato | plasma membrane | 36.1 | 39.32 |
| Solyc07g066550.2.1 | Tomato | plasma membrane | 38.52 | 37.1 |
| VIT_10s0003g01900.t01 | Wine grape | plasma membrane | 51.16 | 33.49 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.8.2 | Gene3D:2.60.120.430 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 | UniProt:K4B8F7 |
| InterPro:Kinase-like_dom_sf | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_4 | InterPro:Malectin | PFAM:PF07714 |
| PFAM:PF11721 | PFAM:PF12799 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PFscan:PS51450 |
| PANTHER:PTHR27006 | PANTHER:PTHR27006:SF54 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF52058 |
| SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc02g071820.2 | EnsemblPlants:Solyc02g071820.2.1 |
| TMHMM:TMhelix | UniParc:UPI0002769018 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2:-:41169272..41178174
Molecular Weight (calculated)
110010.0 Da
IEP (calculated)
7.567
GRAVY (calculated)
-0.220
Length
989 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSHYSSCS FLLIAFSLLL ICEAQNRGLL PEEEKNALRE IGEELGKSDW DFDVNPCDES TSWSTPGTDA LSVYVSNVTC NCDTPDGYCH VQSILLKGQD
101: LAGVLPPSLA KLPNLTIIDL SCNYLSGTIP PEWTSMKLET MSLMLNQLSG PIPKYLGNMT SLVYMRLESN MFNGTVPKEL GGMVNLQILI LSFNNLTGQL
201: PEELNKLTNL KELRLRGNNF TGKLPNLESF KTLQRLEIQA SGFEGPIAPI ISVSTQMIEL RITDLTGGAS EFPQLGNMTR LTRLILRNCN LSGKIPPYIT
301: KMPKLKLLDL SFNKFEGQIP NLESLKKLDF LYLVGNRLTG PIPGWVKSRN SKHMIDLSYN NFSESSEPIC QETLNLFRSY NGTKNSEFGK CVPRCSKKWY
401: SVHINCGGKS VTIGDTVYEA DRDSAGAAKF TSSKESWGAS NSGYFWDKII TAKDYLANNI SAIKGNDSEL YTTARLSALS LTYYGRCLAN GNYTVTLHFA
501: EIVIRDNRSF QSLGKRIFDV YIQGERKLKD FDIRTDAGGV DKPFTIKFNA TVADSTLEVR FQYAGKGTAA LPRRGSYGPL VSAISFEANF KPPPDYKKLV
601: PIIAGSVVSL LILILTISFV AWKRHRNKIA KEEESRGLDS MTGVFTIRQI KAATNNFDAA NKIGEGGFGS VYKGTLSDGA VIAVKQLSSK SKQGKREFVN
701: EIGMISSLHH PNLVQLYGCC AERNHLLLVY EYMENNSLAR ALFGPEEHRL KIDWPTRQKI CIGIAKGLSF LHEESSLKIV HRDIKATNVL LDKKLNPKIS
801: DFGLARLDDD DNNTHITTRV AGTIGYMAPE YALWGYLTYK ADVYSFGVLA LEIAAGKSNM TYRPNEKFVC LLDWALVLQR QGKLKEVVDA TLGSDLNEDE
901: ALRMLNVALL CTSPSPALRP TMSAVVKILE NHLDLPEFTM ESRFYDDYDL FNFQGLRDKY EDTNESQPLT HSSNTITTRD CSYTTSTSA
101: LAGVLPPSLA KLPNLTIIDL SCNYLSGTIP PEWTSMKLET MSLMLNQLSG PIPKYLGNMT SLVYMRLESN MFNGTVPKEL GGMVNLQILI LSFNNLTGQL
201: PEELNKLTNL KELRLRGNNF TGKLPNLESF KTLQRLEIQA SGFEGPIAPI ISVSTQMIEL RITDLTGGAS EFPQLGNMTR LTRLILRNCN LSGKIPPYIT
301: KMPKLKLLDL SFNKFEGQIP NLESLKKLDF LYLVGNRLTG PIPGWVKSRN SKHMIDLSYN NFSESSEPIC QETLNLFRSY NGTKNSEFGK CVPRCSKKWY
401: SVHINCGGKS VTIGDTVYEA DRDSAGAAKF TSSKESWGAS NSGYFWDKII TAKDYLANNI SAIKGNDSEL YTTARLSALS LTYYGRCLAN GNYTVTLHFA
501: EIVIRDNRSF QSLGKRIFDV YIQGERKLKD FDIRTDAGGV DKPFTIKFNA TVADSTLEVR FQYAGKGTAA LPRRGSYGPL VSAISFEANF KPPPDYKKLV
601: PIIAGSVVSL LILILTISFV AWKRHRNKIA KEEESRGLDS MTGVFTIRQI KAATNNFDAA NKIGEGGFGS VYKGTLSDGA VIAVKQLSSK SKQGKREFVN
701: EIGMISSLHH PNLVQLYGCC AERNHLLLVY EYMENNSLAR ALFGPEEHRL KIDWPTRQKI CIGIAKGLSF LHEESSLKIV HRDIKATNVL LDKKLNPKIS
801: DFGLARLDDD DNNTHITTRV AGTIGYMAPE YALWGYLTYK ADVYSFGVLA LEIAAGKSNM TYRPNEKFVC LLDWALVLQR QGKLKEVVDA TLGSDLNEDE
901: ALRMLNVALL CTSPSPALRP TMSAVVKILE NHLDLPEFTM ESRFYDDYDL FNFQGLRDKY EDTNESQPLT HSSNTITTRD CSYTTSTSA
0001: MIYLHRIYFI IVLFTLIFHG RLGFSDNNKL HEAEVRALKE IGKKLGKKDW DFNKDPCSGE GTWIVTTYTT KGFESNITCD CSFLPQNSSC HVIRIALKSQ
0101: NLTGIVPPEF SKLRHLKVLD LSRNSLTGSI PKEWASMRLE DLSFMGNRLS GPFPKVLTRL TMLRNLSLEG NQFSGPIPPD IGQLVHLEKL HLPSNAFTGP
0201: LTEKLGLLKN LTDMRISDNN FTGPIPDFIS NWTRILKLQM HGCGLDGPIP SSISSLTSLT DLRISDLGGK PSSFPPLKNL ESIKTLILRK CKIIGPIPKY
0301: IGDLKKLKTL DLSFNLLSGE IPSSFENMKK ADFIYLTGNK LTGGVPNYFV ERNKNVDVSF NNFTDESSIP SHDCNRVTSN LVESFALGNK SHKGSTCFLQ
0401: RMPCVHPKRY HLYKLYINCG GGEVKVDKEI TYQADDEPKG ASMYVLGANK RWALSSTGNF MDNDDDADEY TVQNTSRLSV NASSPSFGLY RTARVSPLSL
0501: TYYGICLGNG NYTVNLHFAE IIFTDDNTLY SLGKRLFDIY VQDQLVIKNF NIQEAARGSG KPIIKSFLVN VTDHTLKIGL RWAGKGTTGI PIRGVYGPMI
0601: SAISVEPNFK PPVYYDTKDI ILKVGVPVAA ATLLLFIIVG VFWKKRRDKN DIDKELRGLD LQTGTFTLRQ IKAATDNFDV TRKIGEGGFG SVYKGELSEG
0701: KLIAVKQLSA KSRQGNREFV NEIGMISALQ HPNLVKLYGC CVEGNQLILV YEYLENNCLS RALFGKDESS RLKLDWSTRK KIFLGIAKGL TFLHEESRIK
0801: IVHRDIKASN VLLDKDLNAK ISDFGLAKLN DDGNTHISTR IAGTIGYMAP EYAMRGYLTE KADVYSFGVV ALEIVSGKSN TNFRPTEDFV YLLDWAYVLQ
0901: ERGSLLELVD PTLASDYSEE EAMLMLNVAL MCTNASPTLR PTMSQVVSLI EGKTAMQELL SDPSFSTVNP KLKALRNHFW QNELSRSLSF STSGPRTASA
1001: NSLVDAEEKT GLLD
0101: NLTGIVPPEF SKLRHLKVLD LSRNSLTGSI PKEWASMRLE DLSFMGNRLS GPFPKVLTRL TMLRNLSLEG NQFSGPIPPD IGQLVHLEKL HLPSNAFTGP
0201: LTEKLGLLKN LTDMRISDNN FTGPIPDFIS NWTRILKLQM HGCGLDGPIP SSISSLTSLT DLRISDLGGK PSSFPPLKNL ESIKTLILRK CKIIGPIPKY
0301: IGDLKKLKTL DLSFNLLSGE IPSSFENMKK ADFIYLTGNK LTGGVPNYFV ERNKNVDVSF NNFTDESSIP SHDCNRVTSN LVESFALGNK SHKGSTCFLQ
0401: RMPCVHPKRY HLYKLYINCG GGEVKVDKEI TYQADDEPKG ASMYVLGANK RWALSSTGNF MDNDDDADEY TVQNTSRLSV NASSPSFGLY RTARVSPLSL
0501: TYYGICLGNG NYTVNLHFAE IIFTDDNTLY SLGKRLFDIY VQDQLVIKNF NIQEAARGSG KPIIKSFLVN VTDHTLKIGL RWAGKGTTGI PIRGVYGPMI
0601: SAISVEPNFK PPVYYDTKDI ILKVGVPVAA ATLLLFIIVG VFWKKRRDKN DIDKELRGLD LQTGTFTLRQ IKAATDNFDV TRKIGEGGFG SVYKGELSEG
0701: KLIAVKQLSA KSRQGNREFV NEIGMISALQ HPNLVKLYGC CVEGNQLILV YEYLENNCLS RALFGKDESS RLKLDWSTRK KIFLGIAKGL TFLHEESRIK
0801: IVHRDIKASN VLLDKDLNAK ISDFGLAKLN DDGNTHISTR IAGTIGYMAP EYAMRGYLTE KADVYSFGVV ALEIVSGKSN TNFRPTEDFV YLLDWAYVLQ
0901: ERGSLLELVD PTLASDYSEE EAMLMLNVAL MCTNASPTLR PTMSQVVSLI EGKTAMQELL SDPSFSTVNP KLKALRNHFW QNELSRSLSF STSGPRTASA
1001: NSLVDAEEKT GLLD
Arabidopsis Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.