Factsheet for Solyc12g014350.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

extracellular: 22364583
plastid: 22908117
endoplasmic reticulum: 29145071

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 29145071 doi

P Ibort, H Imai, M Uemura, R Aroca

Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039817	Potato	plastid	60.02	97.45
VIT_19s0014g00750.t01	Wine grape	plasma membrane	33.2	71.01
VIT_19s0014g00790.t01	Wine grape	cytosol, nucleus, plasma membrane	57.56	66.59
VIT_19s0014g00680.t01	Wine grape	plasma membrane	66.11	65.92
KRH26159	Soybean	plasma membrane	63.56	64.0
KRH55049	Soybean	endoplasmic reticulum	63.36	63.74
KRH21908	Soybean	plasma membrane	62.77	62.46
KRH27378	Soybean	plasma membrane	61.69	62.36
KRH27392	Soybean	plasma membrane	61.39	62.13
AT1G53430.1	Thale cress	plasma membrane	62.28	61.08
VIT_19s0014g00810.t01	Wine grape	plasma membrane, plastid	60.71	60.59
AT1G53440.1	Thale cress	plasma membrane	61.0	60.0
Bra038124.1-P	Field mustard	plasma membrane	59.23	59.18
CDY60204	Canola	plasma membrane	59.73	58.24
CDY25853	Canola	plasma membrane	59.63	58.14
GSMUA_Achr6P25940_001	Banana	plasma membrane	54.03	56.35
GSMUA_Achr1P04980_001	Banana	plasma membrane	52.06	52.68
Solyc07g055810.2.1	Tomato	plasma membrane	50.1	49.66
KXG29872	Sorghum	plasma membrane	49.12	48.54
Zm00001d016242_P002	Maize	plasma membrane	41.65	48.18
Solyc02g071820.2.1	Tomato	nucleus, plasma membrane	45.48	46.81
Solyc02g071880.2.1	Tomato	plasma membrane	44.6	45.63
Solyc02g071860.2.1	Tomato	extracellular	43.91	44.92
Solyc02g071810.2.1	Tomato	endoplasmic reticulum	44.01	44.36
Solyc02g071800.2.1	Tomato	plasma membrane	38.8	43.5
Os02t0232500-01	Rice	extracellular, plasma membrane	30.55	43.25
VIT_19s0014g00830.t01	Wine grape	plasma membrane	65.72	40.84
Solyc07g066550.2.1	Tomato	plasma membrane	38.61	38.27

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	UniProt:K4DCX0	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Malectin	PFAM:PF07714	PFAM:PF11721	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF93	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc12g014350.1	EnsemblPlants:Solyc12g014350.1.1	TMHMM:TMhelix	UniParc:UPI000276A7D2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr12:-:5158297..5167281

Molecular Weight (calculated)

112826.0 Da

IEP (calculated)

5.533

GRAVY (calculated)

-0.161

Length

1018 amino acids

Sequence
(BLAST)

0001: MDATCIRFCV IFLFLYLLST FRSVDAQLLP EDEVRVLQTI SSKLQNRYWN VSRSSCSQSS GFNMTDPTYD KIMSNITCDC TFNSSSVCHV VTIELKGLNM
0101: TGILPPEIAN LTHLRELDLS RNYLNGSIPS SYGQLRLTIL SLLGNRINGQ IPEELGDIST LEQLNLENNL LEGPLPPKLG SLSRLRELFL SANNLNGTIP
0201: ENFSNLKNMT DFRIDGNSIS GTIPDFLGNW TNMDRLDIQG TSMEGPIPAT ISQLVNMTEL RISDLRGEPM QFPNLTALTK MRRLTLRNCS IFGPIPIYVG
0301: AMPLKLLDLS NNMLNGTIPG AFEQMDFDNM FLGNNALSGA IPSWMFSKRE NMDMSYNNFT QISTPVCDSS TLNLAASYSD TMNNTTDAWC SMKPLICPTD
0401: TKYTSLFINC GGPRTSFEGN NYEADTTNRG PSYFSSPSDR WAFSSSGVYV GLQAASYIAS NTFSLDVSGP DFYNTARLAP NSLKYYGLCL QGGSYRVRLH
0501: FAEIMFSNDS TYSSLGRRIF DVAIQGRVVL RDFNIMEEAN GVGKVITKDF PDVTVSSTLE IHLYWTGKGT NAIPDRGVYG PLISAITVTP NFRVDTGSGL
0601: PVGAVIGIVL ASIVVLLLVL FALWKKGIFG GKNNQEELEL RALDLQTGHF RLRQIKAATN NFDPANKIGE GGFGPVYKGV LADGAIIAVK QLSSKSKQGN
0701: REFVNEIGMI SALQHPNLVK LYGCCIEGNQ LLVIYEYMEN NCLARALFGR DDQRLNIDWA TRKRICSGIA KGLAYLHEES RLKIVHRDIK CTNVLLDKDL
0801: NAKISDFGLA KLDEEENTHI STRIAGTVGY MAPEYAMRGY LTDKADVYSF GVVLLEIVSG KSNTNYRPKE EFVYLLDWAY VLQEQGNLLE LVDPRLGTNY
0901: SKKEAMRMIN VSLLCTNPSP TLRPSMSSVV SMLEGKLPVQ APIIKRTTSD DEMRFKSFEK LSHDSQTTQV STYSQDSQGQ NMNAPWSDSS VSVSVPGKDE
1001: NVTSTSRLLP DLYNVNLD

Best Arabidopsis Sequence Match ( AT1G53430.1 )
(BLAST)

0001: MGFIFSTEKV VYVLLLIFVC LENFGSNAQL LPEDEVQTLR TIFRKLQNQT VNIERTSCSD QNWNFVVESA SNSPTSNITC DCTFNASSVC RVTNIQLKSF
0101: SLPGIFPPEF GNLTRLREID LSRNFLNGTI PTTLSQIPLE ILSVIGNRLS GPFPPQLGDI TTLTDVNLET NLFTGPLPRN LGNLRSLKEL LLSANNFTGQ
0201: IPESLSNLKN LTEFRIDGNS LSGKIPDFIG NWTLLERLDL QGTSMEGPIP PSISNLTNLT ELRITDLRGQ AAFSFPDLRN LMKMKRLVLR NCLIRGPIPE
0301: YIGSMSELKT LDLSSNMLTG VIPDTFRNLD AFNFMFLNNN SLTGPVPQFI INSKENLDLS DNNFTQPPTL SCNQLDVNLI SSYPSVTDNS VQWCLREGLP
0401: CPEDAKQSSL FINCGGSRLK IGKDTYTDDL NSRGQSTFSS VSERWGYSSS GVWLGKEDAG YLATDRFNLI NGSTPEYYKT ARLSPQSLKY YGLCLRRGSY
0501: KLQLHFAEIM FSNDQTFNSL GRRIFDIYVQ GNLLERDFNI AERAGGVGKP FIRQIDGVQV NGSTLEIHLQ WTGKGTNVIP TRGVYGPLIS AITITPNFKV
0601: DTGKPLSNGA VAGIVIAACA VFGLLVLVIL RLTGYLGGKE VDENEELRGL DLQTGSFTLK QIKRATNNFD PENKIGEGGF GPVYKGVLAD GMTIAVKQLS
0701: SKSKQGNREF VTEIGMISAL QHPNLVKLYG CCIEGKELLL VYEYLENNSL ARALFGTEKQ RLHLDWSTRN KICIGIAKGL AYLHEESRLK IVHRDIKATN
0801: VLLDLSLNAK ISDFGLAKLN DDENTHISTR IAGTIGYMAP EYAMRGYLTD KADVYSFGVV CLEIVSGKSN TNYRPKEEFV YLLDWAYVLQ EQGSLLELVD
0901: PDLGTSFSKK EAMRMLNIAL LCTNPSPTLR PPMSSVVSML EGKIKVQPPL VKREADPSGS AAMRFKALEL LSQDSESQVS TYARNREQDI SSSSMDGPWV
1001: DSSFSEPGKD VSLQQQEEGR SSSSSRKLLD DLTDVKIE

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g53430 [Source:UniProtKB/Swiss-Prot;Acc:C0LGG8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.