Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 10
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G53440.1 | Thale cress | plasma membrane | 88.05 | 88.31 |
| Bra038124.1-P | Field mustard | plasma membrane | 80.15 | 81.65 |
| CDY25853 | Canola | plasma membrane | 80.83 | 80.36 |
| CDY60204 | Canola | plasma membrane | 80.73 | 80.27 |
| PGSC0003DMT400034331 | Potato | plasma membrane | 32.66 | 69.9 |
| PGSC0003DMT400039817 | Potato | plastid | 41.43 | 68.58 |
| VIT_19s0014g00750.t01 | Wine grape | plasma membrane | 31.31 | 68.28 |
| PGSC0003DMT400035698 | Potato | cytosol, endoplasmic reticulum, plasma membrane | 31.02 | 66.26 |
| VIT_19s0014g00790.t01 | Wine grape | cytosol, nucleus, plasma membrane | 53.18 | 62.73 |
| PGSC0003DMT400073675 | Potato | plasma membrane | 55.78 | 62.66 |
| Solyc12g014350.1.1 | Tomato | endoplasmic reticulum, extracellular | 61.08 | 62.28 |
| KRH55049 | Soybean | endoplasmic reticulum | 60.5 | 62.06 |
| KRH26159 | Soybean | plasma membrane | 59.92 | 61.52 |
| VIT_19s0014g00680.t01 | Wine grape | plasma membrane | 60.5 | 61.51 |
| KRH21908 | Soybean | plasma membrane | 59.34 | 60.22 |
| KRH27378 | Soybean | plasma membrane | 57.42 | 59.19 |
| KRH27392 | Soybean | plasma membrane | 57.32 | 59.15 |
| VIT_19s0014g00810.t01 | Wine grape | plasma membrane, plastid | 56.84 | 57.84 |
| GSMUA_Achr6P25940_001 | Banana | plasma membrane | 52.22 | 55.53 |
| GSMUA_Achr1P04980_001 | Banana | plasma membrane | 50.29 | 51.89 |
| AT1G07650.2 | Thale cress | plasma membrane | 50.19 | 51.08 |
| AT3G14840.2 | Thale cress | plasma membrane | 46.82 | 47.65 |
| KXG29872 | Sorghum | plasma membrane | 47.11 | 47.48 |
| Zm00001d016242_P002 | Maize | plasma membrane | 39.88 | 47.05 |
| AT1G53420.1 | Thale cress | plasma membrane | 43.16 | 47.01 |
| AT1G29720.1 | Thale cress | plasma membrane | 42.77 | 43.57 |
| AT1G29730.2 | Thale cress | plasma membrane | 42.0 | 43.56 |
| AT1G29750.2 | Thale cress | plasma membrane | 42.0 | 42.7 |
| Os02t0232500-01 | Rice | extracellular, plasma membrane | 28.61 | 41.31 |
| AT1G29740.1 | Thale cress | plasma membrane | 42.29 | 40.72 |
| VIT_19s0014g00830.t01 | Wine grape | plasma membrane | 63.1 | 39.99 |
| AT1G56140.1 | Thale cress | plasma membrane | 39.4 | 39.59 |
| AT1G56130.2 | Thale cress | plasma membrane | 38.44 | 38.66 |
| AT1G56120.1 | Thale cress | cytosol | 37.57 | 37.25 |
| AT1G56145.2 | Thale cress | plasma membrane | 36.42 | 36.38 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.8.2 | Gene3D:2.60.120.430 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EntrezGene:841778 |
| ProteinID:AAF78446.1 | ProteinID:AEE32939.2 | EMBL:AF083693 | ArrayExpress:AT1G53430 | EnsemblPlantsGene:AT1G53430 | RefSeq:AT1G53430 |
| TAIR:AT1G53430 | RefSeq:AT1G53430-TAIR-G | EnsemblPlants:AT1G53430.1 | TAIR:AT1G53430.1 | Unigene:At.21553 | UniProt:C0LGG8 |
| EMBL:FJ708657 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| InterPro:Malectin | RefSeq:NP_001319214.1 | PFAM:PF07714 | PFAM:PF11721 | PFAM:PF13855 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27006 | PANTHER:PTHR27006:SF93 | InterPro:Prot_kinase_dom | SMART:SM00220 |
| SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000195FEE3 | SEG:seg | : | : | : |
Description
Probable LRR receptor-like serine/threonine-protein kinase At1g53430 [Source:UniProtKB/Swiss-Prot;Acc:C0LGG8]
Coordinates
chr1:+:19934987..19941185
Molecular Weight (calculated)
114952.0 Da
IEP (calculated)
5.495
GRAVY (calculated)
-0.196
Length
1038 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGFIFSTEKV VYVLLLIFVC LENFGSNAQL LPEDEVQTLR TIFRKLQNQT VNIERTSCSD QNWNFVVESA SNSPTSNITC DCTFNASSVC RVTNIQLKSF
0101: SLPGIFPPEF GNLTRLREID LSRNFLNGTI PTTLSQIPLE ILSVIGNRLS GPFPPQLGDI TTLTDVNLET NLFTGPLPRN LGNLRSLKEL LLSANNFTGQ
0201: IPESLSNLKN LTEFRIDGNS LSGKIPDFIG NWTLLERLDL QGTSMEGPIP PSISNLTNLT ELRITDLRGQ AAFSFPDLRN LMKMKRLVLR NCLIRGPIPE
0301: YIGSMSELKT LDLSSNMLTG VIPDTFRNLD AFNFMFLNNN SLTGPVPQFI INSKENLDLS DNNFTQPPTL SCNQLDVNLI SSYPSVTDNS VQWCLREGLP
0401: CPEDAKQSSL FINCGGSRLK IGKDTYTDDL NSRGQSTFSS VSERWGYSSS GVWLGKEDAG YLATDRFNLI NGSTPEYYKT ARLSPQSLKY YGLCLRRGSY
0501: KLQLHFAEIM FSNDQTFNSL GRRIFDIYVQ GNLLERDFNI AERAGGVGKP FIRQIDGVQV NGSTLEIHLQ WTGKGTNVIP TRGVYGPLIS AITITPNFKV
0601: DTGKPLSNGA VAGIVIAACA VFGLLVLVIL RLTGYLGGKE VDENEELRGL DLQTGSFTLK QIKRATNNFD PENKIGEGGF GPVYKGVLAD GMTIAVKQLS
0701: SKSKQGNREF VTEIGMISAL QHPNLVKLYG CCIEGKELLL VYEYLENNSL ARALFGTEKQ RLHLDWSTRN KICIGIAKGL AYLHEESRLK IVHRDIKATN
0801: VLLDLSLNAK ISDFGLAKLN DDENTHISTR IAGTIGYMAP EYAMRGYLTD KADVYSFGVV CLEIVSGKSN TNYRPKEEFV YLLDWAYVLQ EQGSLLELVD
0901: PDLGTSFSKK EAMRMLNIAL LCTNPSPTLR PPMSSVVSML EGKIKVQPPL VKREADPSGS AAMRFKALEL LSQDSESQVS TYARNREQDI SSSSMDGPWV
1001: DSSFSEPGKD VSLQQQEEGR SSSSSRKLLD DLTDVKIE
0101: SLPGIFPPEF GNLTRLREID LSRNFLNGTI PTTLSQIPLE ILSVIGNRLS GPFPPQLGDI TTLTDVNLET NLFTGPLPRN LGNLRSLKEL LLSANNFTGQ
0201: IPESLSNLKN LTEFRIDGNS LSGKIPDFIG NWTLLERLDL QGTSMEGPIP PSISNLTNLT ELRITDLRGQ AAFSFPDLRN LMKMKRLVLR NCLIRGPIPE
0301: YIGSMSELKT LDLSSNMLTG VIPDTFRNLD AFNFMFLNNN SLTGPVPQFI INSKENLDLS DNNFTQPPTL SCNQLDVNLI SSYPSVTDNS VQWCLREGLP
0401: CPEDAKQSSL FINCGGSRLK IGKDTYTDDL NSRGQSTFSS VSERWGYSSS GVWLGKEDAG YLATDRFNLI NGSTPEYYKT ARLSPQSLKY YGLCLRRGSY
0501: KLQLHFAEIM FSNDQTFNSL GRRIFDIYVQ GNLLERDFNI AERAGGVGKP FIRQIDGVQV NGSTLEIHLQ WTGKGTNVIP TRGVYGPLIS AITITPNFKV
0601: DTGKPLSNGA VAGIVIAACA VFGLLVLVIL RLTGYLGGKE VDENEELRGL DLQTGSFTLK QIKRATNNFD PENKIGEGGF GPVYKGVLAD GMTIAVKQLS
0701: SKSKQGNREF VTEIGMISAL QHPNLVKLYG CCIEGKELLL VYEYLENNSL ARALFGTEKQ RLHLDWSTRN KICIGIAKGL AYLHEESRLK IVHRDIKATN
0801: VLLDLSLNAK ISDFGLAKLN DDENTHISTR IAGTIGYMAP EYAMRGYLTD KADVYSFGVV CLEIVSGKSN TNYRPKEEFV YLLDWAYVLQ EQGSLLELVD
0901: PDLGTSFSKK EAMRMLNIAL LCTNPSPTLR PPMSSVVSML EGKIKVQPPL VKREADPSGS AAMRFKALEL LSQDSESQVS TYARNREQDI SSSSMDGPWV
1001: DSSFSEPGKD VSLQQQEEGR SSSSSRKLLD DLTDVKIE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.