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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 8
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G56140.1 Thale cress plasma membrane 87.98 87.9
AT1G56120.1 Thale cress cytosol 84.11 82.9
AT1G56145.2 Thale cress plasma membrane 68.12 67.66
KRH44862 Soybean plasma membrane 62.6 62.48
VIT_12s0055g00580.t01 Wine grape plasma membrane 62.4 62.46
KRH44860 Soybean plasma membrane 62.11 61.93
Solyc07g066550.2.1 Tomato plasma membrane 60.47 60.76
KRH37939 Soybean plasma membrane 59.21 59.55
Zm00001d002312_P004 Maize cytosol 30.72 55.13
Os04t0616200-01 Rice plasma membrane 17.34 54.57
Os08t0203600-05 Rice plasma membrane 34.69 53.92
Os04t0616300-01 Rice plasma membrane 53.1 53.46
Os04t0616500-01 Rice plasma membrane 52.91 53.32
TraesCS4A01G449700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 44.38 52.83
TraesCS2D01G415700.1 Wheat plasma membrane 51.84 52.81
HORVU2Hr1G098450.3 Barley vacuole 52.42 52.78
TraesCS2A01G418300.1 Wheat plasma membrane 51.74 52.71
HORVU2Hr1G098390.1 Barley plasma membrane 51.94 52.7
TraesCS2B01G437300.2 Wheat plasma membrane 51.84 52.4
Zm00001d026306_P009 Maize plasma membrane 52.13 52.33
OQU82325 Sorghum plasma membrane 52.42 52.27
TraesCS2A01G418200.1 Wheat plasma membrane, vacuole 51.36 52.22
TraesCS2B01G437200.1 Wheat plasma membrane 51.26 52.17
TraesCS2D01G415600.1 Wheat plasma membrane 51.26 52.07
Os08t0203700-01 Rice vacuole 51.55 52.0
TraesCS7A01G038600.1 Wheat plasma membrane 50.39 51.54
TraesCS7D01G034800.1 Wheat plasma membrane 50.1 51.39
GSMUA_Achr2P17280_001 Banana plasma membrane 31.1 51.28
HORVU7Hr1G006940.9 Barley cytosol 50.29 51.08
Zm00001d024291_P001 Maize mitochondrion, nucleus, plasma membrane, plastid 52.33 50.94
KXG24697 Sorghum nucleus, plasma membrane, plastid, vacuole 52.52 50.8
Os08t0203400-01 Rice plasma membrane 50.29 50.68
GSMUA_Achr8P07040_001 Banana plasma membrane 52.42 50.37
Os05t0256500-00 Rice plasma membrane 30.81 50.08
GSMUA_Achr7P16620_001 Banana cytosol, plasma membrane, plastid 30.62 49.84
TraesCS2A01G418400.1 Wheat plasma membrane 50.58 49.62
TraesCS2D01G415800.1 Wheat plasma membrane 50.48 49.57
KXG27116 Sorghum plasma membrane 50.58 49.53
TraesCS2B01G437400.2 Wheat plasma membrane 50.87 49.44
Os04t0616400-02 Rice plasma membrane 31.3 49.24
Os05t0263100-00 Rice plasma membrane 48.93 49.17
Os05t0258400-00 Rice plasma membrane 32.46 48.98
Os04t0616700-03 Rice plasma membrane 48.45 48.92
Zm00001d026303_P004 Maize cytosol 47.48 48.71
TraesCS3D01G418900.2 Wheat plasma membrane, plastid 35.56 48.29
TraesCS4A01G450300.1 Wheat endoplasmic reticulum, extracellular, vacuole 25.68 48.27
HORVU2Hr1G098400.8 Barley plasma membrane, plastid 49.71 47.72
HORVU3Hr1G093550.9 Barley plasma membrane 47.58 47.62
Os05t0261700-02 Rice cytosol, plasma membrane 22.29 47.33
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 24.32 47.09
TraesCS3B01G459300.1 Wheat extracellular, plasma membrane, vacuole 28.88 46.78
GSMUA_Achr2P17300_001 Banana plasma membrane 31.01 46.44
Os05t0256100-01 Rice plasma membrane 18.22 45.97
TraesCS3B01G459200.1 Wheat plasma membrane 39.15 45.65
TraesCS3A01G423600.1 Wheat plasma membrane 31.59 45.59
Zm00001d002313_P003 Maize extracellular, plasma membrane 24.32 45.47
HORVU2Hr1G098430.3 Barley plastid 20.83 41.59
Os04t0616282-00 Rice extracellular 5.04 40.0
AT1G07650.2 Thale cress plasma membrane 38.18 38.63
AT1G53440.1 Thale cress plasma membrane 38.57 38.45
AT1G53430.1 Thale cress plasma membrane 38.66 38.44
AT3G14840.2 Thale cress plasma membrane 37.98 38.43
Os08t0203201-00 Rice cytosol 4.46 38.33
AT1G53420.1 Thale cress plasma membrane 35.37 38.3
AT1G29720.1 Thale cress plasma membrane 36.53 37.0
AT1G29730.2 Thale cress plasma membrane 35.17 36.26
AT1G29750.2 Thale cress plasma membrane 35.47 35.85
AT1G29740.1 Thale cress plasma membrane 35.37 33.86
VIT_12s0055g00590.t01 Wine grape plasma membrane 61.43 30.12
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:842065
ProteinID:AAF02838.1ProteinID:AAG50912.1ProteinID:ANM59201.1ArrayExpress:AT1G56130EnsemblPlantsGene:AT1G56130RefSeq:AT1G56130
TAIR:AT1G56130RefSeq:AT1G56130-TAIR-GEnsemblPlants:AT1G56130.2Unigene:At.52228UniProt:C0LGH2EMBL:FJ708662
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:MalectinRefSeq:NP_176009.1
PFAM:PF07714PFAM:PF11721PFAM:PF13855ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006
PANTHER:PTHR27006:SF95InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000483AASEG:seg:
Description
Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH2]
Coordinates
chr1:-:20994746..21001013
Molecular Weight (calculated)
113048.0 Da
IEP (calculated)
6.896
GRAVY (calculated)
-0.095
Length
1032 amino acids
Sequence
(BLAST)
0001: MTRIRRSPCL LLLIIWFMCI AGSVQVVQSQ NQTGATTHPD EARALNSIFA AWKIQAPREW NISGELCSGA AIDASVLDSN PAYNPLIKCD CSFQNSTICR
0101: ITNIKVYAID VVGPIPPELW TLTYLTNLNL GQNVLTGSLP PAIGNLTRMQ WMTFGINALS GPVPKEIGLL TDLRLLGISS NNFSGSIPDE IGRCTKLQQM
0201: YIDSSGLSGR IPLSFANLVQ LEQAWIADLE VTDQIPDFIG DWTKLTTLRI IGTGLSGPIP SSFSNLTSLT ELRLGDISSG SSSLDFIKDM KSLSVLVLRN
0301: NNLTGTIPST IGEHSSLRQV DLSFNKLHGP IPASLFNLSQ LTHLFLGNNT LNGSFPTQKT QSLRNVDVSY NDLSGSLPSW VSLPSLKLNL VANNFTLEGL
0401: DNRVLPGLNC LQKNFPCNRG KGIYSDFSIN CGGPEKRSVT GALFEREDED FGPASFFVSA GQRWAASSVG LFAGSSNNIY IATSQSQFVN TLDSELFQSA
0501: RLSASSVRYY GLGLENGGYT VTLQFAEIQI LGSTSTTWKG LGRRRFDIYV QGRLVEKDFD VRRTAGDSTV RAVQRVYKAN VSENHLEVHL FWAGKGTCCI
0601: PIQGAYGPLI SAVSATPDFT PTVANKPPSK GKNRTGTIVG VIVGVGLLSI LAGVVMFTIR KRRKRYTDDE ELLGMDVKPY IFTYSELKSA TQDFDPSNKL
0701: GEGGFGPVYK GNLNDGRVVA VKLLSVGSRQ GKGQFVAEIV AISSVLHRNL VKLYGCCFEG EHRMLVYEYL PNGSLDQALF GDKTLHLDWS TRYEICLGVA
0801: RGLVYLHEEA SVRIVHRDVK ASNILLDSRL VPQISDFGLA KLYDDKKTHI STRVAGTIGY LAPEYAMRGH LTEKTDVYAF GVVALELVSG RPNSDENLEE
0901: EKKYLLEWAW NLHEKSRDIE LIDDKLTDFN MEEAKRMIGI ALLCTQTSHA LRPPMSRVVA MLSGDVEIGD VTSKPGYVSD WRFDDTTGSS LSGFQIKDTT
1001: GYSMSLVAPG SEISPRDSDF KPMLGSKINE GR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.