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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • plasma membrane 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d026306_P009 Maize plasma membrane 92.66 93.29
Zm00001d002312_P004 Maize cytosol 49.95 89.91
TraesCS2D01G415600.1 Wheat plasma membrane 78.55 80.02
TraesCS2A01G418200.1 Wheat plasma membrane, vacuole 78.45 80.0
TraesCS2B01G437200.1 Wheat plasma membrane 78.07 79.68
Os04t0616300-01 Rice plasma membrane 78.84 79.61
TraesCS4A01G449700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 66.57 79.47
TraesCS2D01G415700.1 Wheat plasma membrane 77.2 78.87
TraesCS2A01G418300.1 Wheat plasma membrane 76.81 78.48
TraesCS2B01G437300.2 Wheat plasma membrane 77.1 78.16
HORVU2Hr1G098450.3 Barley vacuole 77.39 78.15
HORVU2Hr1G098390.1 Barley plasma membrane 76.72 78.07
Os04t0616500-01 Rice plasma membrane 76.52 77.34
TraesCS7D01G034800.1 Wheat plasma membrane 75.17 77.34
TraesCS7A01G038600.1 Wheat plasma membrane 75.17 77.11
HORVU7Hr1G006940.9 Barley cytosol 73.82 75.2
TraesCS4A01G450300.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.84 73.22
Os04t0616400-02 Rice plasma membrane 45.8 72.26
Os04t0616700-03 Rice plasma membrane 71.01 71.92
KXG27116 Sorghum plasma membrane 71.5 70.21
KXG24697 Sorghum nucleus, plasma membrane, plastid, vacuole 67.15 65.14
HORVU2Hr1G098430.3 Barley plastid 31.21 62.48
VIT_12s0055g00580.t01 Wine grape plasma membrane 56.62 56.84
CDX81476 Canola cytosol 15.56 56.69
Solyc07g066550.2.1 Tomato plasma membrane 55.94 56.38
GSMUA_Achr7P16620_001 Banana cytosol, plasma membrane, plastid 34.3 55.99
KRH44862 Soybean plasma membrane 55.36 55.42
GSMUA_Achr2P17280_001 Banana plasma membrane 33.24 54.95
KRH44860 Soybean plasma membrane 54.78 54.78
KRH37939 Soybean plasma membrane 53.82 54.29
GSMUA_Achr8P07040_001 Banana plasma membrane 56.04 54.0
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 27.54 53.47
Bra007909.1-P Field mustard plasma membrane 51.98 53.11
Bra007908.1-P Field mustard cytosol 35.46 52.58
Bra030815.1-P Field mustard plasma membrane 51.98 52.49
CDY42407 Canola plasma membrane 52.37 52.47
AT1G56130.2 Thale cress plasma membrane 52.27 52.42
CDY10509 Canola plasma membrane 51.98 52.39
CDY10508 Canola plasma membrane 52.27 52.37
AT1G56140.1 Thale cress plasma membrane 52.17 52.27
Bra030813.1-P Field mustard plasma membrane 52.27 51.52
AT1G56120.1 Thale cress cytosol 51.69 51.1
CDX67736 Canola plasma membrane 49.57 51.1
Bra003333.1-P Field mustard plasma membrane 49.57 51.1
CDY59119 Canola plasma membrane 49.37 50.9
CDX98288 Canola plasma membrane 49.08 50.6
AT1G56145.2 Thale cress plasma membrane 50.53 50.34
Bra007907.1-P Field mustard plasma membrane 49.86 50.24
CDY38804 Canola golgi, plasma membrane 31.01 50.23
GSMUA_Achr2P17300_001 Banana plasma membrane 33.24 49.93
CDY47811 Canola plasma membrane 48.89 49.85
CDY68250 Canola plasma membrane 48.79 49.7
Bra033670.1-P Field mustard plasma membrane 48.7 49.66
CDY46490 Canola plasma membrane 48.6 49.51
Bra035966.1-P Field mustard plasma membrane 48.6 49.51
CDY22357 Canola plasma membrane 48.5 49.46
CDY11604 Canola plasma membrane 30.43 49.3
CDY25239 Canola plasma membrane 43.96 49.24
Bra016226.1-P Field mustard plasma membrane 26.18 49.09
Bra033958.1-P Field mustard plasma membrane 46.38 48.93
CDY12693 Canola plasma membrane 45.8 47.26
KXG35457 Sorghum plasma membrane 37.2 37.34
KXG29872 Sorghum plasma membrane 37.0 37.18
KXG35455 Sorghum plasma membrane 36.52 36.59
VIT_12s0055g00590.t01 Wine grape plasma membrane 56.33 27.7
CDY03757 Canola plasma membrane 52.27 26.48
CDY43003 Canola plasma membrane 52.46 25.88
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1Z5RFW6
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
InterPro:MalectinEnsemblPlants:OQU82325ProteinID:OQU82325ProteinID:OQU82325.1PFAM:PF00069PFAM:PF11721
PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF15
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3006G215600SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000B424CC9SEG:seg:
Description
hypothetical protein
Coordinates
chr6:-:56353175..56361000
Molecular Weight (calculated)
112279.0 Da
IEP (calculated)
7.429
GRAVY (calculated)
-0.108
Length
1035 amino acids
Sequence
(BLAST)
0001: MVRPGSTSRP SSCRRLHGSA LPTLLLLLLL LLAASAAQAQ QTATMKTDPV EAAAVNAVFA KLGQAASSAW NISGDPCTGT ATDGTVIDDN NNFNPAIKCE
0101: CSVQNNVTVC HVTKLKIYAL NAVGPIPQEL QNLTRLTNLD LRQNYLTGPL PSFLGNLTAM QYMSLGINAL SGSVPKELGN LANLVSLGFG SNYLNGSLPS
0201: ELGNLEKLEQ LYIDSAGLSG PLPSTFSRLT RMKTLWASDN DFTGQIPDFI GNWTNLTELR FQGNSFQGPL PATLSNLVQL TSLRIGDIVN GSSSLTFISN
0301: MTSLSTLILR NCRISDSLAS VNFSQFANLN LLDLSFNNIT GQVPEALVNL NSLNFLFLGN NSLSGSLPSS IGSSLKNLDF SYNQLSGNFP SWTTQNNLQL
0401: NLVANNFMTN SVLPSGLSCL QRDTPCFLGS PQSASIAVDC GSSRPISGSD NSMYQPDNAS LGAASYYVTG APTWGVSNVG KFMDTSNGSG SYIIFSSHQF
0501: QNTLDSELFQ TARMSPSSLR YYGIGLQNGN YTVTLQFAEF DFEDSQTWKS VGRRVFDIYL QGERKEKNFD IRKAAGGKSY TAVEKQYIVP VTRNFLEIHL
0601: FWAGKGTCCI PSQGYYGPAI SALSATPNFT PTVRNSAQKK SSSKTGVIVG VVVGAAVLGV LALAGLCMWR QRRRKLLLEQ QELYSIVGRP NVFAYGELRT
0701: ATENFSSNNL LGEGGYGSVY KGKLADGRVV AVKQLSETSH QGKQQFAAEI ETISRVQHRN LVKLYGCCLE GNKPLLVYEY LENGSLDKAL FGSGKLNLDW
0801: PTRFEICLGI ARGLAYLHEE SSIRVVHRDI KASNVLLDAN LNPKISDFGL AKLYDDKKTH VSTKVAGTFG YLAPEYAMRG HMTEKVDVFA FGVVILETLA
0901: GRPNFDNTLD EDKVYILEWV WQLYEENHPL DMVDPKLAQF NSNQVLRAIH VALLCTQGSP HQRPSMSRAV SMLAGDVEVG EVVNKPSYIT EWQIKGGDAS
1001: SFMSSNVSGQ SSVAPRSSAA QTSSPFLSSV IEEGR
Best Arabidopsis Sequence Match ( AT1G56130.2 )
(BLAST)
0001: MTRIRRSPCL LLLIIWFMCI AGSVQVVQSQ NQTGATTHPD EARALNSIFA AWKIQAPREW NISGELCSGA AIDASVLDSN PAYNPLIKCD CSFQNSTICR
0101: ITNIKVYAID VVGPIPPELW TLTYLTNLNL GQNVLTGSLP PAIGNLTRMQ WMTFGINALS GPVPKEIGLL TDLRLLGISS NNFSGSIPDE IGRCTKLQQM
0201: YIDSSGLSGR IPLSFANLVQ LEQAWIADLE VTDQIPDFIG DWTKLTTLRI IGTGLSGPIP SSFSNLTSLT ELRLGDISSG SSSLDFIKDM KSLSVLVLRN
0301: NNLTGTIPST IGEHSSLRQV DLSFNKLHGP IPASLFNLSQ LTHLFLGNNT LNGSFPTQKT QSLRNVDVSY NDLSGSLPSW VSLPSLKLNL VANNFTLEGL
0401: DNRVLPGLNC LQKNFPCNRG KGIYSDFSIN CGGPEKRSVT GALFEREDED FGPASFFVSA GQRWAASSVG LFAGSSNNIY IATSQSQFVN TLDSELFQSA
0501: RLSASSVRYY GLGLENGGYT VTLQFAEIQI LGSTSTTWKG LGRRRFDIYV QGRLVEKDFD VRRTAGDSTV RAVQRVYKAN VSENHLEVHL FWAGKGTCCI
0601: PIQGAYGPLI SAVSATPDFT PTVANKPPSK GKNRTGTIVG VIVGVGLLSI LAGVVMFTIR KRRKRYTDDE ELLGMDVKPY IFTYSELKSA TQDFDPSNKL
0701: GEGGFGPVYK GNLNDGRVVA VKLLSVGSRQ GKGQFVAEIV AISSVLHRNL VKLYGCCFEG EHRMLVYEYL PNGSLDQALF GDKTLHLDWS TRYEICLGVA
0801: RGLVYLHEEA SVRIVHRDVK ASNILLDSRL VPQISDFGLA KLYDDKKTHI STRVAGTIGY LAPEYAMRGH LTEKTDVYAF GVVALELVSG RPNSDENLEE
0901: EKKYLLEWAW NLHEKSRDIE LIDDKLTDFN MEEAKRMIGI ALLCTQTSHA LRPPMSRVVA MLSGDVEIGD VTSKPGYVSD WRFDDTTGSS LSGFQIKDTT
1001: GYSMSLVAPG SEISPRDSDF KPMLGSKINE GR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.