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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 18260611
extracellular: 21255809
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 21255809 doi
T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki
National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os04t0616300-01 Rice plasma membrane 89.36 89.27
TraesCS4A01G449700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 66.8 78.89
Zm00001d002312_P004 Maize cytosol 43.55 77.57
Os04t0616400-02 Rice plasma membrane 49.22 76.83
TraesCS2D01G415700.1 Wheat plasma membrane 75.88 76.7
OQU82325 Sorghum plasma membrane 77.34 76.52
TraesCS2D01G415600.1 Wheat plasma membrane 75.78 76.38
Zm00001d026306_P009 Maize plasma membrane 76.66 76.36
TraesCS2A01G418200.1 Wheat plasma membrane, vacuole 75.68 76.35
TraesCS2B01G437200.1 Wheat plasma membrane 75.59 76.33
TraesCS2A01G418300.1 Wheat plasma membrane 75.39 76.21
TraesCS2B01G437300.2 Wheat plasma membrane 75.78 76.0
HORVU2Hr1G098390.1 Barley plasma membrane 75.29 75.81
TraesCS7D01G034800.1 Wheat plasma membrane 74.41 75.75
TraesCS7A01G038600.1 Wheat plasma membrane 74.51 75.62
HORVU2Hr1G098450.3 Barley vacuole 75.68 75.61
Os04t0616700-03 Rice plasma membrane 74.32 74.46
HORVU7Hr1G006940.9 Barley cytosol 73.44 74.02
TraesCS4A01G450300.1 Wheat endoplasmic reticulum, extracellular, vacuole 38.77 72.31
Os04t0616200-01 Rice plasma membrane 22.56 70.43
Zm00001d026303_P004 Maize cytosol 66.6 67.79
Os08t0203600-05 Rice plasma membrane 41.8 64.46
Os08t0203700-01 Rice vacuole 63.96 64.03
HORVU2Hr1G098430.3 Barley plastid 32.23 63.83
Os08t0203400-01 Rice plasma membrane 62.5 62.5
Os05t0263100-00 Rice plasma membrane 60.16 59.98
Os05t0261700-02 Rice cytosol, plasma membrane 28.03 59.05
Os05t0258400-00 Rice plasma membrane 39.06 58.48
CDX81476 Canola cytosol 16.11 58.1
Os05t0256500-00 Rice plasma membrane 35.84 57.8
GSMUA_Achr2P17280_001 Banana plasma membrane 34.57 56.55
Os05t0256100-01 Rice plasma membrane 22.56 56.48
Os04t0616282-00 Rice extracellular 7.13 56.15
GSMUA_Achr7P16620_001 Banana cytosol, plasma membrane, plastid 34.57 55.84
Solyc07g066550.2.1 Tomato plasma membrane 55.96 55.79
VIT_12s0055g00580.t01 Wine grape plasma membrane 55.57 55.19
KRH44862 Soybean plasma membrane 54.88 54.35
Os08t0203201-00 Rice cytosol 6.35 54.17
KRH44860 Soybean plasma membrane 54.2 53.62
AT1G56140.1 Thale cress plasma membrane 54.0 53.53
Bra030815.1-P Field mustard plasma membrane 53.42 53.37
CDY10509 Canola plasma membrane 53.52 53.36
KRH37939 Soybean plasma membrane 53.32 53.22
Bra007909.1-P Field mustard plasma membrane 52.64 53.21
GSMUA_Achr8P07040_001 Banana plasma membrane 55.76 53.17
CDY42407 Canola plasma membrane 53.61 53.15
CDY10508 Canola plasma membrane 53.52 53.05
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 27.54 52.91
AT1G56130.2 Thale cress plasma membrane 53.32 52.91
Bra007908.1-P Field mustard cytosol 35.94 52.72
AT1G56120.1 Thale cress cytosol 53.42 52.24
Bra030813.1-P Field mustard plasma membrane 53.52 52.19
CDY47811 Canola plasma membrane 50.98 51.43
GSMUA_Achr2P17300_001 Banana plasma membrane 34.57 51.38
Bra033670.1-P Field mustard plasma membrane 50.78 51.23
CDX67736 Canola plasma membrane 50.1 51.1
Bra003333.1-P Field mustard plasma membrane 50.1 51.1
CDY22357 Canola plasma membrane 50.59 51.03
CDY59119 Canola plasma membrane 49.9 50.9
Bra035966.1-P Field mustard plasma membrane 50.39 50.79
CDY46490 Canola plasma membrane 50.39 50.79
CDY68250 Canola plasma membrane 50.39 50.79
Bra007907.1-P Field mustard plasma membrane 50.88 50.73
CDY25239 Canola plasma membrane 45.7 50.65
CDX98288 Canola plasma membrane 49.61 50.6
Bra033958.1-P Field mustard plasma membrane 48.44 50.56
CDY38804 Canola golgi, plasma membrane 31.45 50.39
AT1G56145.2 Thale cress plasma membrane 50.68 49.95
CDY11604 Canola plasma membrane 31.15 49.92
Bra016226.1-P Field mustard plasma membrane 26.76 49.64
CDY12693 Canola plasma membrane 47.46 48.45
Os08t0201700-00 Rice plasma membrane 7.62 45.09
Os02t0232500-01 Rice extracellular, plasma membrane 23.14 32.96
Os09t0345300-01 Rice plasma membrane 22.56 32.72
Os08t0201500-01 Rice cytosol, extracellular, mitochondrion 3.52 30.77
VIT_12s0055g00590.t01 Wine grape plasma membrane 55.47 26.98
CDY03757 Canola plasma membrane 52.83 26.48
CDY43003 Canola plasma membrane 52.54 25.64
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:9268723
UniProt:A0A0P0WET4ProteinID:BAS91015.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:MalectinEnsemblPlantsGene:Os04g0616500EnsemblPlants:Os04t0616500-01PFAM:PF00069
PFAM:PF11721ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF15
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000393A18CRefSeq:XP_015637010.1RefSeq:XP_015637012.1SEG:seg
Description
Similar to H0525G02.11 protein. (Os04t0616500-01)
Coordinates
chr4:-:31299841..31307729
Molecular Weight (calculated)
111791.0 Da
IEP (calculated)
7.270
GRAVY (calculated)
-0.130
Length
1024 amino acids
Sequence
(BLAST)
0001: MGWRMAVSRL LHGCVLVLLL AAAVVQAQRA ATRTDPTEAA ALNAVFAKLG QQAQSSWNLS GDPCTGRATD GSAIDDTSFN PAITCDCTFQ NSTICRITKL
0101: KIHAVDASGP IPEELRNLTR LTDLNLGQNL LSGPLPSFIG ELTNMQKMTF GINSLSGPIP KELGNLTNLI SLGLGSNHFN GSLPTELGNL IKLQELYIDS
0201: AGLSGPLPSS LSKLTRMQIL WASDNNFTGQ IPDYIGSWNL TDLRFQGNSF QGPIPAALSN LVQLSSLRIG DIENGSSSSL AFISNMTSLS ILILRNCRIS
0301: DNLASLDFSK FASLSLLDLS FNNITGEVPA TLLGLNSLNF LFLGNNSLSG SLPTSKGSSL STLDFSYNQL SGNFPPWASD KNLQLNLVAN NFVIDSSNNS
0401: ILPSGLACLQ RNTSFFLGSP QSSSFAVNCG SNRFISGSDN LRYETDDVNL QAASYNVTGA PTWGVSNVGK FMDAPNGNYI IYSSRQFQHT LDSELFQTSR
0501: MSPSSLRYYG IGLENGNYTV TLQFAEFGIE DTQSWKSLGR RVFDIYVQGE RKEKNFDIRK TAGDKSYTVV KKQYKVPVTK NFLEIHLFWA GKGTCCIPTQ
0601: GYYGPTISAL SVIPADFTPT VGNTAHKNKS TSKTGVIVGV VVGVTVLGLV ALVGIFMWRQ KRRKLSLEQQ ELYSIVGRPN VFSYSELRSA TENFSSSNRL
0701: GEGGYGTVYK GKLTDGRVVA VKQLSQTSHQ GKKQFATEIE TISRVQHRNL VKLYGCCLEG NNPLLVYEYM ENGSLDKALF GTEKLTIDWP ARFEICLGIA
0801: RGLAYLHEES SICVVHRDIK ASNVLIDANL NPKISDFGLA KLYDDKKTHV STKVAGTFGY LAPEYAMRGH MTEKVDVFAF GVVLLETLAG RPNYDDTLEE
0901: DKIYIFEWAW ELYENNNPLG LVDPKLKEFN REEVLRAIRV ALLCTQWSPH QRAPMSRVVS MLAGDVEVPD VLTKPSYITE WQIKGGNTSF ANSGVSGQSS
1001: SAPGSASEQQ GSSLFLNSVI PEGR
Best Arabidopsis Sequence Match ( AT1G56130.2 )
(BLAST)
0001: MTRIRRSPCL LLLIIWFMCI AGSVQVVQSQ NQTGATTHPD EARALNSIFA AWKIQAPREW NISGELCSGA AIDASVLDSN PAYNPLIKCD CSFQNSTICR
0101: ITNIKVYAID VVGPIPPELW TLTYLTNLNL GQNVLTGSLP PAIGNLTRMQ WMTFGINALS GPVPKEIGLL TDLRLLGISS NNFSGSIPDE IGRCTKLQQM
0201: YIDSSGLSGR IPLSFANLVQ LEQAWIADLE VTDQIPDFIG DWTKLTTLRI IGTGLSGPIP SSFSNLTSLT ELRLGDISSG SSSLDFIKDM KSLSVLVLRN
0301: NNLTGTIPST IGEHSSLRQV DLSFNKLHGP IPASLFNLSQ LTHLFLGNNT LNGSFPTQKT QSLRNVDVSY NDLSGSLPSW VSLPSLKLNL VANNFTLEGL
0401: DNRVLPGLNC LQKNFPCNRG KGIYSDFSIN CGGPEKRSVT GALFEREDED FGPASFFVSA GQRWAASSVG LFAGSSNNIY IATSQSQFVN TLDSELFQSA
0501: RLSASSVRYY GLGLENGGYT VTLQFAEIQI LGSTSTTWKG LGRRRFDIYV QGRLVEKDFD VRRTAGDSTV RAVQRVYKAN VSENHLEVHL FWAGKGTCCI
0601: PIQGAYGPLI SAVSATPDFT PTVANKPPSK GKNRTGTIVG VIVGVGLLSI LAGVVMFTIR KRRKRYTDDE ELLGMDVKPY IFTYSELKSA TQDFDPSNKL
0701: GEGGFGPVYK GNLNDGRVVA VKLLSVGSRQ GKGQFVAEIV AISSVLHRNL VKLYGCCFEG EHRMLVYEYL PNGSLDQALF GDKTLHLDWS TRYEICLGVA
0801: RGLVYLHEEA SVRIVHRDVK ASNILLDSRL VPQISDFGLA KLYDDKKTHI STRVAGTIGY LAPEYAMRGH LTEKTDVYAF GVVALELVSG RPNSDENLEE
0901: EKKYLLEWAW NLHEKSRDIE LIDDKLTDFN MEEAKRMIGI ALLCTQTSHA LRPPMSRVVA MLSGDVEIGD VTSKPGYVSD WRFDDTTGSS LSGFQIKDTT
1001: GYSMSLVAPG SEISPRDSDF KPMLGSKINE GR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.