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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
iPSORT:mitochondrion
MultiLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G449700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 81.4 95.39
TraesCS7D01G034800.1 Wheat plasma membrane 92.81 93.74
TraesCS7A01G038600.1 Wheat plasma membrane 92.32 92.96
TraesCS4A01G450300.1 Wheat endoplasmic reticulum, extracellular, vacuole 47.34 87.61
HORVU2Hr1G098390.1 Barley plasma membrane 81.59 81.51
HORVU2Hr1G098450.3 Barley vacuole 81.59 80.88
Zm00001d002312_P004 Maize cytosol 42.81 75.65
Zm00001d026306_P009 Maize plasma membrane 75.79 74.9
OQU82325 Sorghum plasma membrane 75.2 73.82
Os04t0616500-01 Rice plasma membrane 74.02 73.44
Os04t0616300-01 Rice plasma membrane 74.02 73.37
HORVU5Hr1G056600.2 Barley cytosol 5.91 69.77
Os04t0616400-02 Rice plasma membrane 43.7 67.68
Zm00001d026303_P004 Maize cytosol 66.04 66.7
HORVU2Hr1G098430.3 Barley plastid 33.86 66.54
Os04t0616700-03 Rice plasma membrane 66.93 66.54
HORVU2Hr1G098400.8 Barley plasma membrane, plastid 68.01 64.28
HORVU3Hr1G093550.9 Barley plasma membrane 58.86 58.0
CDX81476 Canola cytosol 15.65 55.99
VIT_12s0055g00580.t01 Wine grape plasma membrane 55.61 54.8
GSMUA_Achr2P17280_001 Banana plasma membrane 33.56 54.47
GSMUA_Achr7P16620_001 Banana cytosol, plasma membrane, plastid 33.66 53.94
Solyc07g066550.2.1 Tomato plasma membrane 53.54 52.97
KRH44862 Soybean plasma membrane 53.44 52.51
KRH37939 Soybean plasma membrane 52.56 52.05
GSMUA_Achr8P07040_001 Banana plasma membrane 54.92 51.96
KRH44860 Soybean plasma membrane 52.85 51.88
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 26.97 51.41
Bra007909.1-P Field mustard plasma membrane 50.79 50.94
Bra007908.1-P Field mustard cytosol 34.94 50.86
AT1G56140.1 Thale cress plasma membrane 51.48 50.63
CDY10509 Canola plasma membrane 50.98 50.44
Bra030815.1-P Field mustard plasma membrane 50.79 50.34
AT1G56130.2 Thale cress plasma membrane 51.08 50.29
CDY10508 Canola plasma membrane 51.08 50.24
CDY42407 Canola plasma membrane 51.08 50.24
GSMUA_Achr2P17300_001 Banana plasma membrane 33.86 49.93
AT1G56120.1 Thale cress cytosol 51.08 49.57
Bra030813.1-P Field mustard plasma membrane 50.98 49.33
CDY59119 Canola plasma membrane 48.52 49.1
CDY47811 Canola plasma membrane 49.02 49.06
Bra003333.1-P Field mustard plasma membrane 48.43 49.0
CDX67736 Canola plasma membrane 48.43 49.0
CDY38804 Canola golgi, plasma membrane 30.71 48.83
CDY68250 Canola plasma membrane 48.72 48.72
Bra035966.1-P Field mustard plasma membrane 48.62 48.62
CDY46490 Canola plasma membrane 48.62 48.62
CDX98288 Canola plasma membrane 48.03 48.61
Bra007907.1-P Field mustard plasma membrane 49.11 48.59
CDY25239 Canola plasma membrane 44.09 48.48
Bra033670.1-P Field mustard plasma membrane 48.23 48.28
CDY22357 Canola plasma membrane 48.03 48.08
Bra033958.1-P Field mustard plasma membrane 46.26 47.91
AT1G56145.2 Thale cress plasma membrane 48.82 47.74
CDY11604 Canola plasma membrane 30.02 47.73
Bra016226.1-P Field mustard plasma membrane 25.59 47.1
CDY12693 Canola plasma membrane 45.47 46.06
HORVU5Hr1G056670.6 Barley plasma membrane 35.83 35.86
VIT_12s0055g00590.t01 Wine grape plasma membrane 55.22 26.65
CDY03757 Canola plasma membrane 51.08 25.4
CDY43003 Canola plasma membrane 50.69 24.55
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A287VFN2
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:HORVU7Hr1G006940
EnsemblPlants:HORVU7Hr1G006940.9InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Malectin
PFAM:PF00069PFAM:PF11721ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006
PANTHER:PTHR27006:SF42InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI000B46F42CSEG:seg::
Description
No Description!
Coordinates
chrchr7H:+:9411133..9418250
Molecular Weight (calculated)
107342.0 Da
IEP (calculated)
6.376
GRAVY (calculated)
-0.145
Length
1016 amino acids
Sequence
(BLAST)
0001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXC SLSAVRLPSD AAALNAVFAK LGQKAGPQWN ISGDPCTGAA IDNTNIDNND IFKAAIKCEV CTGGNISVCR
0101: ITRLKIYALD AVGPIPEELQ NLTALTDLDL GQNYLTGPLP SFIGELTDMK YMTFGINALS GPLPKELGNL KNLIRLGLGG NNFSGSLPSE LGNLAKLEEL
0201: YIDSSGLSGP LPSSLSQLTK MKKLWASDND FTGQIPDYIG SWSSLTELRF QGNSFQGPIP ATLSNLGQLA SLRIGDILNG SSSSLAFINN LTSLNTLVLR
0301: NCRISDKLVS IDFSKFTSLN LLDLSFNNIT GQVPQTLLNL NSLAFLFLGN NSLSGSLPSS IGSSLKNLDF SYNQLSGSIP SWAKNLQLNL VANNFVADSS
0401: SNSVLPAGWG CLQRNTPCFL DSPKSSSFAV DCGKSIVGPD SPVYEPDRAS LGAASFYVTG AQTWGVSNVG KFMEANNGSY LIHSPGQFLN TLDTELFQNA
0501: RMSPSSLRYF GIGLENGNYT VTLQFAEFDF PDTQSWKSRG RRVFDIYVQG ERKEQNFDIR KAAGGKSFTA VRKQYTVPVT KNFLEIHLFW AGKGTCCIPT
0601: QGYYGPAISA LSATPNFTPT VRNAVEKKKG SKTGVIAGAT VGVVVLGLLA FAGIFVWRQK KRKLALEQEE LYGIVGRPNV LSYGELRSAT ENFSSNNLLG
0701: QGGYGSVFKG KLTDGRFVAV KQLSETSHQG KKEFATEIET ISRVQHRNLV KLHGCCLEGN KPLLVYEYLE NGSLDRALFG KGKTNLDWST RFEICLGIAR
0801: GLAYLHEESS IRVVHRDIKA SNVLLDANLN PKISDFGLAK LYDDQETHVS TKVAGTFGYL APEYAMRGHV TEKVDVFAFG VVVLETLAGR PNYYTSEDQN
0901: KVYIFEWVWE LYEDGQPLDM LDPRLEDFDS EEVLRAIKVA LVCTQGSPHQ RPPMSRVVAM LAGDIEAPDW VPKPSYITEW QIKGGGGDTS YMSSDINGES
1001: SSEPAQFLGS VIDKGR
Best Arabidopsis Sequence Match ( AT1G56120.1 )
(BLAST)
0001: MVRAQNRTRP TTHPDDARAL NSIFAAWKIR APREWNISGE LCSGVAIDAS VLDSNHAYNP LIKCDCSFQN STICRINNIK VYAIDVVGPI PPELWTLTYL
0101: TNLNLGQNYL TGSLSPAIGN LTRMQWMTFG INALSGPIPK EIGLLTDLRL LGISSNNFSG SLPAEIGSCT KLQQMYIDSS GLSGGIPLSF ANFVELEVAW
0201: IMDVELTGRI PDFIGFWTKL TTLRILGTGL SGPIPSSFSN LIALTELRLG DISNGSSSLD FIKDMKSLSV LVLRNNNLTG TIPSTIGGYT SLQQVDLSFN
0301: KLHGPIPASL FNLSRLTHLF LGNNTLNGSL PTLKGQSLSN LDVSYNDLSG SLPSWVSLPD LKLNLVANNF TLEGLDNRVL SGLHCLQKNF PCNRGEGICK
0401: CNKKIPSQIM FSMLNVQTYG QGSNVLLEKN CFKTFAIDWC LDYNFSINCG GPEIRSVSGA LFEKEDADLG PASFVVSAAK RWAASSVGNF AGSSNNIYIA
0501: TSLAQFINTM DSELFQSARL SASSLRYYGL GLENGGYTVT LQFAEVQIEG SNSWKGIGRR RFNIYVQGRL VEKDFDIRRT AGGSSVRAVQ REYKTNVSEN
0601: HLEVHLFWAG KGTCCIPIQG AYGPLIAAVS ATPDFTPTVA NRPPSKGKSR TGTIVGVIVG VGLLSIFAGV VILVIRKRRK PYTDDEEILS MDVKPYTFTY
0701: SELKNATQDF DLSNKLGEGG FGAVYKGNLN DGREVAVKQL SIGSRQGKGQ FVAEIIAISS VLHRNLVKLY GCCFEGDHRL LVYEYLPNGS LDQALFGDKS
0801: LHLDWSTRYE ICLGVARGLV YLHEEASVRI IHRDVKASNI LLDSELVPKV SDFGLAKLYD DKKTHISTRV AGTIGYLAPE YAMRGHLTEK TDVYAFGVVA
0901: LELVSGRKNS DENLEEGKKY LLEWAWNLHE KNRDVELIDD ELSEYNMEEV KRMIGIALLC TQSSYALRPP MSRVVAMLSG DAEVNDATSK PGYLTDCTFD
1001: DTTSSSFSNF QTKDTSFSTS FIAPGPEMPL RDGESKPMVG FKIKEGR
Arabidopsis Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.