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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G56130.2 Thale cress plasma membrane 82.9 84.11
AT1G56140.1 Thale cress plasma membrane 81.76 82.87
CDY38804 Canola golgi, plasma membrane 47.95 78.56
CDY11604 Canola plasma membrane 47.95 78.56
Bra016226.1-P Field mustard plasma membrane 40.78 77.36
AT1G56145.2 Thale cress plasma membrane 65.81 66.31
VIT_12s0055g00580.t01 Wine grape plasma membrane 60.55 61.49
KRH44862 Soybean plasma membrane 60.08 60.83
Solyc07g066550.2.1 Tomato plasma membrane 58.93 60.08
KRH44860 Soybean plasma membrane 59.12 59.81
KRH37939 Soybean plasma membrane 57.4 58.58
Os04t0616200-01 Rice plasma membrane 17.48 55.79
Zm00001d002312_P004 Maize cytosol 30.09 54.78
Os08t0203600-05 Rice plasma membrane 34.38 54.22
Os04t0616300-01 Rice plasma membrane 52.53 53.66
Os04t0616500-01 Rice plasma membrane 52.24 53.42
TraesCS2D01G415700.1 Wheat plasma membrane 51.58 53.31
TraesCS4A01G449700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 44.13 53.29
TraesCS2A01G418300.1 Wheat plasma membrane 51.48 53.21
HORVU2Hr1G098450.3 Barley vacuole 52.05 53.17
HORVU2Hr1G098390.1 Barley plasma membrane 51.29 52.8
TraesCS2B01G437300.2 Wheat plasma membrane 51.48 52.79
TraesCS2A01G418200.1 Wheat plasma membrane, vacuole 50.72 52.32
TraesCS2B01G437200.1 Wheat plasma membrane 50.62 52.27
Os08t0203700-01 Rice vacuole 51.0 52.2
TraesCS2D01G415600.1 Wheat plasma membrane 50.62 52.17
Zm00001d026306_P009 Maize plasma membrane 50.91 51.85
OQU82325 Sorghum plasma membrane 51.1 51.69
TraesCS7A01G038600.1 Wheat plasma membrane 49.67 51.54
TraesCS7D01G034800.1 Wheat plasma membrane 49.38 51.39
HORVU7Hr1G006940.9 Barley cytosol 49.57 51.08
Os08t0203400-01 Rice plasma membrane 49.76 50.88
GSMUA_Achr2P17280_001 Banana plasma membrane 29.99 50.16
Os05t0256500-00 Rice plasma membrane 30.37 50.08
KXG24697 Sorghum nucleus, plasma membrane, plastid, vacuole 51.0 50.05
Zm00001d024291_P001 Maize mitochondrion, nucleus, plasma membrane, plastid 50.62 50.0
GSMUA_Achr7P16620_001 Banana cytosol, plasma membrane, plastid 30.18 49.84
KXG27116 Sorghum plasma membrane 50.14 49.81
GSMUA_Achr8P07040_001 Banana plasma membrane 51.0 49.72
TraesCS2A01G418400.1 Wheat plasma membrane 49.86 49.62
TraesCS2D01G415800.1 Wheat plasma membrane 49.67 49.48
Os04t0616700-03 Rice plasma membrane 48.23 49.41
TraesCS2B01G437400.2 Wheat plasma membrane 49.95 49.25
Os04t0616400-02 Rice plasma membrane 30.85 49.24
TraesCS4A01G450300.1 Wheat endoplasmic reticulum, extracellular, vacuole 25.79 49.18
Zm00001d026303_P004 Maize cytosol 46.9 48.81
Os05t0263100-00 Rice plasma membrane 47.47 48.39
Os05t0258400-00 Rice plasma membrane 31.61 48.39
Os05t0261700-02 Rice cytosol, plasma membrane 22.35 48.15
TraesCS3D01G418900.2 Wheat plasma membrane, plastid 34.86 48.03
HORVU2Hr1G098400.8 Barley plasma membrane, plastid 48.81 47.53
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 23.97 47.09
HORVU3Hr1G093550.9 Barley plasma membrane 46.32 47.04
TraesCS3B01G459300.1 Wheat extracellular, plasma membrane, vacuole 27.89 45.84
Os05t0256100-01 Rice plasma membrane 17.86 45.72
GSMUA_Achr2P17300_001 Banana plasma membrane 29.8 45.28
TraesCS3B01G459200.1 Wheat plasma membrane 38.2 45.2
Zm00001d002313_P003 Maize extracellular, plasma membrane 23.78 45.11
TraesCS3A01G423600.1 Wheat plasma membrane 30.75 45.03
HORVU2Hr1G098430.3 Barley plastid 21.11 42.75
AT1G53420.1 Thale cress plasma membrane 35.15 38.61
AT3G14840.2 Thale cress plasma membrane 37.25 38.24
AT1G07650.2 Thale cress plasma membrane 36.96 37.94
AT1G53440.1 Thale cress plasma membrane 37.34 37.78
AT1G53430.1 Thale cress plasma membrane 37.25 37.57
Os04t0616282-00 Rice extracellular 4.58 36.92
Os08t0203201-00 Rice cytosol 4.2 36.67
AT1G29730.2 Thale cress plasma membrane 34.67 36.26
AT1G29720.1 Thale cress plasma membrane 35.24 36.21
AT1G29750.2 Thale cress plasma membrane 34.0 34.87
AT1G29740.1 Thale cress plasma membrane 34.38 33.4
VIT_12s0055g00590.t01 Wine grape plasma membrane 59.79 29.74
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:842064
ProteinID:AEE33346.1ArrayExpress:AT1G56120EnsemblPlantsGene:AT1G56120RefSeq:AT1G56120TAIR:AT1G56120RefSeq:AT1G56120-TAIR-G
EnsemblPlants:AT1G56120.1TAIR:AT1G56120.1ncoils:CoilUniProt:F4I3K0GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:MalectinRefSeq:NP_176008.4PFAM:PF07714PFAM:PF11721
PFAM:PF13855PO:PO:0000293ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006
PANTHER:PTHR27006:SF95InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0001A7B1CFSEG:seg:
Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
Coordinates
chr1:-:20987271..20993072
Molecular Weight (calculated)
114772.0 Da
IEP (calculated)
6.888
GRAVY (calculated)
-0.094
Length
1047 amino acids
Sequence
(BLAST)
0001: MVRAQNRTRP TTHPDDARAL NSIFAAWKIR APREWNISGE LCSGVAIDAS VLDSNHAYNP LIKCDCSFQN STICRINNIK VYAIDVVGPI PPELWTLTYL
0101: TNLNLGQNYL TGSLSPAIGN LTRMQWMTFG INALSGPIPK EIGLLTDLRL LGISSNNFSG SLPAEIGSCT KLQQMYIDSS GLSGGIPLSF ANFVELEVAW
0201: IMDVELTGRI PDFIGFWTKL TTLRILGTGL SGPIPSSFSN LIALTELRLG DISNGSSSLD FIKDMKSLSV LVLRNNNLTG TIPSTIGGYT SLQQVDLSFN
0301: KLHGPIPASL FNLSRLTHLF LGNNTLNGSL PTLKGQSLSN LDVSYNDLSG SLPSWVSLPD LKLNLVANNF TLEGLDNRVL SGLHCLQKNF PCNRGEGICK
0401: CNKKIPSQIM FSMLNVQTYG QGSNVLLEKN CFKTFAIDWC LDYNFSINCG GPEIRSVSGA LFEKEDADLG PASFVVSAAK RWAASSVGNF AGSSNNIYIA
0501: TSLAQFINTM DSELFQSARL SASSLRYYGL GLENGGYTVT LQFAEVQIEG SNSWKGIGRR RFNIYVQGRL VEKDFDIRRT AGGSSVRAVQ REYKTNVSEN
0601: HLEVHLFWAG KGTCCIPIQG AYGPLIAAVS ATPDFTPTVA NRPPSKGKSR TGTIVGVIVG VGLLSIFAGV VILVIRKRRK PYTDDEEILS MDVKPYTFTY
0701: SELKNATQDF DLSNKLGEGG FGAVYKGNLN DGREVAVKQL SIGSRQGKGQ FVAEIIAISS VLHRNLVKLY GCCFEGDHRL LVYEYLPNGS LDQALFGDKS
0801: LHLDWSTRYE ICLGVARGLV YLHEEASVRI IHRDVKASNI LLDSELVPKV SDFGLAKLYD DKKTHISTRV AGTIGYLAPE YAMRGHLTEK TDVYAFGVVA
0901: LELVSGRKNS DENLEEGKKY LLEWAWNLHE KNRDVELIDD ELSEYNMEEV KRMIGIALLC TQSSYALRPP MSRVVAMLSG DAEVNDATSK PGYLTDCTFD
1001: DTTSSSFSNF QTKDTSFSTS FIAPGPEMPL RDGESKPMVG FKIKEGR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.