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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002313_P003 Maize extracellular, plasma membrane 48.39 92.39
Os04t0616200-01 Rice plasma membrane 25.71 82.62
TraesCS2A01G418400.1 Wheat plasma membrane 81.02 81.18
TraesCS2D01G415800.1 Wheat plasma membrane 80.93 81.16
TraesCS2B01G437400.2 Wheat plasma membrane 80.65 80.04
HORVU2Hr1G098400.8 Barley plasma membrane, plastid 80.27 78.7
Os04t0616282-00 Rice extracellular 9.3 75.38
OQU82325 Sorghum plasma membrane 70.21 71.5
KXG24697 Sorghum nucleus, plasma membrane, plastid, vacuole 63.38 62.61
Solyc07g066550.2.1 Tomato plasma membrane 54.08 55.5
GSMUA_Achr7P16620_001 Banana cytosol, plasma membrane, plastid 33.11 55.05
VIT_12s0055g00580.t01 Wine grape plasma membrane 53.32 54.51
GSMUA_Achr2P17280_001 Banana plasma membrane 31.97 53.83
CDX81476 Canola cytosol 14.42 53.52
KRH44862 Soybean plasma membrane 52.37 53.38
KRH37939 Soybean plasma membrane 51.14 52.53
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 26.57 52.53
KRH44860 Soybean plasma membrane 51.42 52.37
Bra007908.1-P Field mustard cytosol 34.54 52.15
GSMUA_Achr8P07040_001 Banana plasma membrane 52.75 51.77
Bra007909.1-P Field mustard plasma membrane 49.62 51.63
CDY10509 Canola plasma membrane 50.09 51.41
Bra030815.1-P Field mustard plasma membrane 49.81 51.22
CDX67736 Canola plasma membrane 48.39 50.8
Bra003333.1-P Field mustard plasma membrane 48.39 50.8
AT1G56140.1 Thale cress plasma membrane 49.72 50.73
CDY59119 Canola plasma membrane 48.2 50.6
AT1G56130.2 Thale cress plasma membrane 49.53 50.58
CDY42407 Canola plasma membrane 49.43 50.44
CDY10508 Canola plasma membrane 49.34 50.34
CDX98288 Canola plasma membrane 47.91 50.3
AT1G56120.1 Thale cress cytosol 49.81 50.14
AT1G56145.2 Thale cress plasma membrane 49.15 49.86
CDY47811 Canola plasma membrane 47.82 49.66
Bra030813.1-P Field mustard plasma membrane 49.34 49.52
CDY46490 Canola plasma membrane 47.63 49.41
Bra035966.1-P Field mustard plasma membrane 47.63 49.41
Bra007907.1-P Field mustard plasma membrane 48.1 49.37
GSMUA_Achr2P17300_001 Banana plasma membrane 32.26 49.35
CDY68250 Canola plasma membrane 47.53 49.31
CDY22357 Canola plasma membrane 47.44 49.26
Bra033670.1-P Field mustard plasma membrane 47.34 49.16
CDY38804 Canola golgi, plasma membrane 29.79 49.14
CDY25239 Canola plasma membrane 42.88 48.92
CDY11604 Canola plasma membrane 29.22 48.2
Bra033958.1-P Field mustard plasma membrane 44.59 47.91
Bra016226.1-P Field mustard plasma membrane 24.57 46.92
CDY12693 Canola plasma membrane 42.88 45.06
KXG35457 Sorghum plasma membrane 36.81 37.63
KXG35455 Sorghum plasma membrane 36.43 37.17
KXG29872 Sorghum plasma membrane 36.15 36.99
VIT_12s0055g00590.t01 Wine grape plasma membrane 52.56 26.32
CDY03757 Canola plasma membrane 49.81 25.7
CDY43003 Canola plasma membrane 50.19 25.21
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1B6PN72
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR032675EnsemblPlants:KXG27116ProteinID:KXG27116ProteinID:KXG27116.1
InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:MalectinPFAM:PF00069PFAM:PF11721ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF42InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220EnsemblPlantsGene:SORBI_3006G215400SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-TM
TMHMM:TMhelixUniParc:UPI00081ABB9BSEG:seg:::
Description
hypothetical protein
Coordinates
chr6:-:56339325..56347787
Molecular Weight (calculated)
114730.0 Da
IEP (calculated)
6.574
GRAVY (calculated)
-0.100
Length
1054 amino acids
Sequence
(BLAST)
0001: MRKPRLSGCG LLHVCVSLSP VLLFLLLLPS SWRAAAQAQQ APQTDPVEAA AVNAILSKLG LSAPPSWNIS GNPCSGAATD DTSIDDNPAF NPAIKCDCSD
0101: RNNTLCHVTR LKINTLDAVG PIPEELRNLT HLVKLDFRKN YFYGPLPAFI GELTNLESMT VGINALSGPV PKELGNLTNL LSLALGSNSF NGTLPDELGK
0201: LTKLRQIYID SNDFSGPLPS TLSQLKNLSI LWASDNNFSG QIPDYLGSLT NLTQLRLQGN SFQGPIPSSL SNLVNLKKLR IGDIVNGSSQ LAFIDNMTSL
0301: GELVLRNTKI SDTLASVDFS KFVNLYLLDL SFNNITGQIP QSILNLPSLS YLFLGNNSLS GSLPATKSPS LTNLDFSYNH ISGNFPSWAT EKKLQLNLVA
0401: NDFVMGSSNN SVLPWGLDCL QRSTPCFLGS PKSASFAVDS GGSRTISGSD SSIYQPDNAD LRAASYYVAG APTWGVSGVG LFLDADAPNG SYIIYSSRQF
0501: ENTLDSALFQ TARMSPSSLR YYGIGLENGN YTVTLQFAEV DFPDMQSWRS RGRRVFDIYV QGERKEQNFD IRKAAGGKSF TAVKKQYVVP VTKNFLEIHL
0601: FWAGKGTCCI PYKGYYGPAI SALSATPNFV PTVRSSADSK SSRKTGVIVG VVVGVSVLAL IVLAGIFLWC QKRRKLLLEL EELYTIVGRP NVFSYSELRS
0701: ATENFCSSNL LGEGGYGSVY KGKLSDGRVV AVKQLSQSSN QGKMQFAAEI ETISRVQHRN LVRLYGCCLE SKTPLLVYEY LENGSLDQAL FGKGSLNLDW
0801: STRFEICLGI ARGIAYLHEE STVRIVHRDI KASNVLIDAD LNPKISDFGL AKLYDDKKTH VSTKVAGTFG YLAPEYAMRG HMTEKVDVFA FGVVALEIVA
0901: GESNYQNTME EDTTYIFERV WELYENGRPL EFVDPKLTEY NGYEVLRVIR VALHCTQGSP HKRPSMSRVV AMLTGDADTT EDVAKPSYIT EWQVKQVADD
1001: VSGSFTSSQV GSSSTHQPVS SSLSGGVQAS PEPGGDLTPV VPSPLFTSII DEGR
Best Arabidopsis Sequence Match ( AT1G56130.2 )
(BLAST)
0001: MTRIRRSPCL LLLIIWFMCI AGSVQVVQSQ NQTGATTHPD EARALNSIFA AWKIQAPREW NISGELCSGA AIDASVLDSN PAYNPLIKCD CSFQNSTICR
0101: ITNIKVYAID VVGPIPPELW TLTYLTNLNL GQNVLTGSLP PAIGNLTRMQ WMTFGINALS GPVPKEIGLL TDLRLLGISS NNFSGSIPDE IGRCTKLQQM
0201: YIDSSGLSGR IPLSFANLVQ LEQAWIADLE VTDQIPDFIG DWTKLTTLRI IGTGLSGPIP SSFSNLTSLT ELRLGDISSG SSSLDFIKDM KSLSVLVLRN
0301: NNLTGTIPST IGEHSSLRQV DLSFNKLHGP IPASLFNLSQ LTHLFLGNNT LNGSFPTQKT QSLRNVDVSY NDLSGSLPSW VSLPSLKLNL VANNFTLEGL
0401: DNRVLPGLNC LQKNFPCNRG KGIYSDFSIN CGGPEKRSVT GALFEREDED FGPASFFVSA GQRWAASSVG LFAGSSNNIY IATSQSQFVN TLDSELFQSA
0501: RLSASSVRYY GLGLENGGYT VTLQFAEIQI LGSTSTTWKG LGRRRFDIYV QGRLVEKDFD VRRTAGDSTV RAVQRVYKAN VSENHLEVHL FWAGKGTCCI
0601: PIQGAYGPLI SAVSATPDFT PTVANKPPSK GKNRTGTIVG VIVGVGLLSI LAGVVMFTIR KRRKRYTDDE ELLGMDVKPY IFTYSELKSA TQDFDPSNKL
0701: GEGGFGPVYK GNLNDGRVVA VKLLSVGSRQ GKGQFVAEIV AISSVLHRNL VKLYGCCFEG EHRMLVYEYL PNGSLDQALF GDKTLHLDWS TRYEICLGVA
0801: RGLVYLHEEA SVRIVHRDVK ASNILLDSRL VPQISDFGLA KLYDDKKTHI STRVAGTIGY LAPEYAMRGH LTEKTDVYAF GVVALELVSG RPNSDENLEE
0901: EKKYLLEWAW NLHEKSRDIE LIDDKLTDFN MEEAKRMIGI ALLCTQTSHA LRPPMSRVVA MLSGDVEIGD VTSKPGYVSD WRFDDTTGSS LSGFQIKDTT
1001: GYSMSLVAPG SEISPRDSDF KPMLGSKINE GR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.