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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole, plasma membrane, plastid, nucleus

Predictor Summary:
  • nucleus 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, plasma membrane, plastid, vacuole
Any Predictor:nucleus, plasma membrane, plastid, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
Predotar:plastid
PProwler:secretory
WoLF PSORT:nucleus
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d024291_P001 Maize mitochondrion, nucleus, plasma membrane, plastid 88.94 89.53
Os08t0203600-05 Rice plasma membrane 48.92 78.61
Os08t0203700-01 Rice vacuole 75.26 78.49
Os08t0203400-01 Rice plasma membrane 72.73 75.78
Os05t0261700-02 Rice cytosol, plasma membrane 32.43 71.19
Os05t0256500-00 Rice plasma membrane 42.27 71.02
Os05t0263100-00 Rice plasma membrane 68.04 70.69
Os05t0256100-01 Rice plasma membrane 26.99 70.42
Os05t0258400-00 Rice plasma membrane 44.61 69.59
Os08t0203201-00 Rice cytosol 7.69 68.33
OQU82325 Sorghum plasma membrane 65.14 67.15
KXG27116 Sorghum plasma membrane 62.61 63.38
VIT_12s0055g00580.t01 Wine grape plasma membrane 56.61 58.58
GSMUA_Achr7P16620_001 Banana cytosol, plasma membrane, plastid 34.21 57.57
GSMUA_Achr2P17280_001 Banana plasma membrane 33.27 56.71
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 28.12 56.29
Solyc07g066550.2.1 Tomato plasma membrane 54.08 56.18
KRH44862 Soybean plasma membrane 53.8 55.51
CDX81476 Canola cytosol 14.62 54.93
KRH44860 Soybean plasma membrane 53.14 54.78
GSMUA_Achr8P07040_001 Banana plasma membrane 54.92 54.56
KRH37939 Soybean plasma membrane 52.3 54.39
Bra030815.1-P Field mustard plasma membrane 51.17 53.27
CDY10509 Canola plasma membrane 51.17 53.16
AT1G56140.1 Thale cress plasma membrane 50.89 52.57
AT1G56130.2 Thale cress plasma membrane 50.8 52.52
Bra007909.1-P Field mustard plasma membrane 49.86 52.52
Bra007908.1-P Field mustard cytosol 34.21 52.29
CDY42407 Canola plasma membrane 50.52 52.18
CDX67736 Canola plasma membrane 49.02 52.09
Bra003333.1-P Field mustard plasma membrane 48.92 51.99
CDY10508 Canola plasma membrane 50.33 51.98
CDY38804 Canola golgi, plasma membrane 30.93 51.64
CDY59119 Canola plasma membrane 48.55 51.59
CDX98288 Canola plasma membrane 48.45 51.49
Bra030813.1-P Field mustard plasma membrane 50.42 51.24
GSMUA_Achr2P17300_001 Banana plasma membrane 33.08 51.23
CDY47811 Canola plasma membrane 48.64 51.13
AT1G56120.1 Thale cress cytosol 50.05 51.0
Bra033670.1-P Field mustard plasma membrane 48.45 50.94
CDY22357 Canola plasma membrane 48.27 50.74
Bra035966.1-P Field mustard plasma membrane 48.27 50.69
CDY46490 Canola plasma membrane 48.27 50.69
CDY68250 Canola plasma membrane 48.17 50.59
CDY11604 Canola plasma membrane 30.27 50.55
AT1G56145.2 Thale cress plasma membrane 49.11 50.43
Bra033958.1-P Field mustard plasma membrane 45.92 49.95
CDY25239 Canola plasma membrane 43.21 49.89
Bra007907.1-P Field mustard plasma membrane 47.89 49.76
Bra016226.1-P Field mustard plasma membrane 25.59 49.46
CDY12693 Canola plasma membrane 44.52 47.36
KXG35455 Sorghum plasma membrane 37.39 38.63
KXG35457 Sorghum plasma membrane 37.21 38.51
KXG29872 Sorghum plasma membrane 37.11 38.45
VIT_12s0055g00590.t01 Wine grape plasma membrane 56.42 28.6
CDY03757 Canola plasma membrane 50.05 26.14
CDY43003 Canola plasma membrane 49.95 25.41
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1B6PGF3
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR032675EnsemblPlants:KXG24697ProteinID:KXG24697ProteinID:KXG24697.1InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sf
InterPro:MalectinPFAM:PF07714PFAM:PF11721ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006
PANTHER:PTHR27006:SF52InterPro:Prot_kinase_domSMART:SM00220EnsemblPlantsGene:SORBI_3007G073400SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI00081AB8D5SEG:seg:
Description
hypothetical protein
Coordinates
chr7:+:8301771..8308156
Molecular Weight (calculated)
116876.0 Da
IEP (calculated)
6.674
GRAVY (calculated)
-0.148
Length
1067 amino acids
Sequence
(BLAST)
0001: MMVICMLILV DDHLFPGHSF ASHQRTNQSE RAREMAAASI RYRHSSGGGS HGRRLLWLLL ACSWVAAASG QQQTARTDPA EVAALNTILG RWGLKASAAW
0101: NISGEPCSGV AVDTTDVDSN PNINPAIKCD CTYNNATVCH ITKLKVYALN VVGQIPAELQ NLTYLNNLNL QQNYLTGPVP SFMGKFPMQY LSLAINPLSG
0201: TLPKELGNLT NLISLGISLN NFTGELPSEL GNLSKLEQIY FDSSGFSGPF PSTFSKLKKL KILWASDNEF TGKIPDFIGS LTQLEDLRFQ GNSFEGPIPK
0301: SLSNLTKLTS LRIGDIVNGS SSLSFISNLT SLNVLILRNS RISDTLATVN FSNLVGLTLL DLSFNNLTGQ IPESILNLDK LGFLFLGNNS LSGSLPDVKS
0401: PSLNNLDFSY NQLSGSFPSW ATQDNLQLNL VANNFVLGIS NNSILPSGLN CLQQDIPCFR GSPEYSSFAV DCGSNRSMTG SDNTFYEIDP TNIGAASYYV
0501: TGQTRWGVSN VGKFNEAPNG SYIIYSSQQF QNALDSELFQ TARMSPSSLR YYGIGLENGN YTVELQFAEF AYPESPTWQS TGRRVFDIYI QGGLKEKNFD
0601: IRKTAGGRSY VAVYKKYNAT VSKNFLEIHL FWAGKGTCCI PTQGYYGPMI SALSVTPNFT PTVRNGVPKK KSKAGAIAGI VIGAAVVGLA ALAGIFMLVQ
0701: KRRRVAQRQE ELYNMVGRPN VFSNAELKLA TDNFSSQNIL GEGGYGPVYK GKLPDGRIIA VKQLSQTSHQ GKSQFVTEVA TISAVQHRNL VKLYGCCIDS
0801: NTPLLVYEYH ENGSLDRALF GDSGLSLDWR TRFEIILGIA RGLTYLHEES SVRIVHRDIK ASNVLLDTDL TPKISDFGLA KLFDEKKTHV STKIAGTFGY
0901: LAPEYAMRGH LTEKADVFAF GVVALETVAG RSNTDSSLEE DRIYLFEWAW ELYERDQALG ILDARMEEFD SEEALRVISV ALLCTQGSPH QRPPMSRVVK
1001: MLTGDVEVTE VVAKPSYITE WQRRGGNTSY VTSDYSGDTT GEFSTQRETI APLTPSPAMT GIIDDGR
Best Arabidopsis Sequence Match ( AT1G56130.2 )
(BLAST)
0001: MTRIRRSPCL LLLIIWFMCI AGSVQVVQSQ NQTGATTHPD EARALNSIFA AWKIQAPREW NISGELCSGA AIDASVLDSN PAYNPLIKCD CSFQNSTICR
0101: ITNIKVYAID VVGPIPPELW TLTYLTNLNL GQNVLTGSLP PAIGNLTRMQ WMTFGINALS GPVPKEIGLL TDLRLLGISS NNFSGSIPDE IGRCTKLQQM
0201: YIDSSGLSGR IPLSFANLVQ LEQAWIADLE VTDQIPDFIG DWTKLTTLRI IGTGLSGPIP SSFSNLTSLT ELRLGDISSG SSSLDFIKDM KSLSVLVLRN
0301: NNLTGTIPST IGEHSSLRQV DLSFNKLHGP IPASLFNLSQ LTHLFLGNNT LNGSFPTQKT QSLRNVDVSY NDLSGSLPSW VSLPSLKLNL VANNFTLEGL
0401: DNRVLPGLNC LQKNFPCNRG KGIYSDFSIN CGGPEKRSVT GALFEREDED FGPASFFVSA GQRWAASSVG LFAGSSNNIY IATSQSQFVN TLDSELFQSA
0501: RLSASSVRYY GLGLENGGYT VTLQFAEIQI LGSTSTTWKG LGRRRFDIYV QGRLVEKDFD VRRTAGDSTV RAVQRVYKAN VSENHLEVHL FWAGKGTCCI
0601: PIQGAYGPLI SAVSATPDFT PTVANKPPSK GKNRTGTIVG VIVGVGLLSI LAGVVMFTIR KRRKRYTDDE ELLGMDVKPY IFTYSELKSA TQDFDPSNKL
0701: GEGGFGPVYK GNLNDGRVVA VKLLSVGSRQ GKGQFVAEIV AISSVLHRNL VKLYGCCFEG EHRMLVYEYL PNGSLDQALF GDKTLHLDWS TRYEICLGVA
0801: RGLVYLHEEA SVRIVHRDVK ASNILLDSRL VPQISDFGLA KLYDDKKTHI STRVAGTIGY LAPEYAMRGH LTEKTDVYAF GVVALELVSG RPNSDENLEE
0901: EKKYLLEWAW NLHEKSRDIE LIDDKLTDFN MEEAKRMIGI ALLCTQTSHA LRPPMSRVVA MLSGDVEIGD VTSKPGYVSD WRFDDTTGSS LSGFQIKDTT
1001: GYSMSLVAPG SEISPRDSDF KPMLGSKINE GR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.