Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:cytosol
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
 plasma membrane: 18260611
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0261700-02 Rice cytosol, plasma membrane 40.51 85.6
Os08t0203600-05 Rice plasma membrane 47.52 73.49
Os05t0256500-00 Rice plasma membrane 45.37 73.39
Os05t0258400-00 Rice plasma membrane 47.42 71.2
Os08t0203400-01 Rice plasma membrane 70.59 70.8
Os05t0256100-01 Rice plasma membrane 27.65 69.44
Zm00001d024291_P001 Maize mitochondrion, nucleus, plasma membrane, plastid 70.98 68.77
KXG24697 Sorghum nucleus, plasma membrane, plastid, vacuole 70.69 68.04
Os08t0203700-01 Rice vacuole 66.6 66.86
Os04t0616300-01 Rice plasma membrane 61.44 61.56
Os04t0616500-01 Rice plasma membrane 59.98 60.16
Os04t0616200-01 Rice plasma membrane 18.4 57.62
Os04t0616400-02 Rice plasma membrane 36.03 56.4
Os04t0616700-03 Rice plasma membrane 55.7 55.97
VIT_12s0055g00580.t01 Wine grape plasma membrane 54.24 54.03
GSMUA_Achr7P16620_001 Banana cytosol, plasma membrane, plastid 33.3 53.94
Os04t0616282-00 Rice extracellular 6.82 53.85
GSMUA_Achr2P17280_001 Banana plasma membrane 32.13 52.72
Os08t0203201-00 Rice cytosol 6.13 52.5
KRH44862 Soybean plasma membrane 52.78 52.42
Solyc07g066550.2.1 Tomato plasma membrane 52.0 52.0
KRH37939 Soybean plasma membrane 51.7 51.75
CDX81476 Canola cytosol 14.22 51.41
KRH44860 Soybean plasma membrane 51.8 51.4
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 26.58 51.22
GSMUA_Achr8P07040_001 Banana plasma membrane 52.58 50.28
Bra007909.1-P Field mustard plasma membrane 49.27 49.95
Bra007908.1-P Field mustard cytosol 33.79 49.71
Bra030815.1-P Field mustard plasma membrane 49.27 49.37
CDY10509 Canola plasma membrane 49.27 49.27
AT1G56140.1 Thale cress plasma membrane 49.37 49.08
CDY10508 Canola plasma membrane 49.27 48.98
CDY42407 Canola plasma membrane 49.27 48.98
AT1G56130.2 Thale cress plasma membrane 49.17 48.93
CDY47811 Canola plasma membrane 48.1 48.67
CDY59119 Canola plasma membrane 47.52 48.61
CDX67736 Canola plasma membrane 47.52 48.61
Bra035966.1-P Field mustard plasma membrane 48.0 48.52
CDY46490 Canola plasma membrane 48.0 48.52
Bra003333.1-P Field mustard plasma membrane 47.42 48.51
Bra033670.1-P Field mustard plasma membrane 47.61 48.18
CDY68250 Canola plasma membrane 47.61 48.13
CDX98288 Canola plasma membrane 47.03 48.11
Bra030813.1-P Field mustard plasma membrane 49.17 48.1
CDY22357 Canola plasma membrane 47.52 48.08
CDY38804 Canola golgi, plasma membrane 29.8 47.89
CDY25239 Canola plasma membrane 43.04 47.84
Bra033958.1-P Field mustard plasma membrane 45.67 47.81
AT1G56120.1 Thale cress cytosol 48.39 47.47
Bra007907.1-P Field mustard plasma membrane 47.22 47.22
GSMUA_Achr2P17300_001 Banana plasma membrane 31.65 47.17
AT1G56145.2 Thale cress plasma membrane 47.61 47.06
CDY11604 Canola plasma membrane 29.11 46.79
Bra016226.1-P Field mustard plasma membrane 25.02 46.56
CDY12693 Canola plasma membrane 44.4 45.46
Os08t0201500-01 Rice cytosol, extracellular, mitochondrion 4.67 41.03
Os08t0201700-00 Rice plasma membrane 6.43 38.15
Os09t0345300-01 Rice plasma membrane 23.27 33.85
Os02t0232500-01 Rice extracellular, plasma membrane 22.69 32.41
VIT_12s0055g00590.t01 Wine grape plasma membrane 54.63 26.65
CDY03757 Canola plasma membrane 49.46 24.87
CDY43003 Canola plasma membrane 49.27 24.12
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A0P0WJV8
ProteinID:BAS93060.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sfInterPro:MalectinEnsemblPlantsGene:Os05g0263100EnsemblPlants:Os05t0263100-00PFAM:PF00069PFAM:PF11721
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF52InterPro:Prot_kinase_domSMART:SM00220
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI000393AAACSEG:seg
Description
Similar to SHR5-receptor-like kinase (Fragment). (Os05t0263100-00)
Coordinates
chr5:+:10232710..10246527
Molecular Weight (calculated)
113139.0 Da
IEP (calculated)
7.635
GRAVY (calculated)
-0.084
Length
1027 amino acids
Sequence
(BLAST)
0001: MTSFTYIYKL EVISLINKPR SVVSGERERE MRSCGIRGVI RHHLAWLVLI LCSWQVAAAQ AQQAPKTDPV EAAALNTILG RWGKKASPEW NISGELCSGF
0101: ATDKTDWDYY PNINPFIKCD CTDSNNTLCH ITRLRVTNLN VVGQIPTELQ NLTHLVDLNF RNNYLTGPIP PFIGKFTSMQ YLSLSLNPLS GLLPKELGNL
0201: TNLVSLGIGS NNFTGGLPEE LGNLTKLQRL YIDSSGFSGP FPSSFSKLQN LNTLKASDNG FNGKIPEYLG TITNLVEIAL YGNSFEGPIP ESLSNLAKLK
0301: TLRIGDIVNG ISPLAFISNM TSLSTIILRN CKISSDLGAI DFSNNMVVLW HRDLSFNNIT GEVPQSILNL GNLKFLFLGN NSLTGRLPDG ISSSLKAIDF
0401: SYNQLTGSFP SWASQNNLQL NLVANNFLLE STSDSTLPWG LNCLQQDTPC FRGSPKYYSF AVDCGSNGST RGSDDTIYEA DPTNLGAATY YVTGQTRWGV
0501: SSVGNYFQRE DAKNIIYSSQ NFQNVVHSEL FQTARMSPSS LRYYGLGLEN GNYTVLLQFA EFAFPDSQTW LSLGRRVFDI YIQGALKEKD FDIKKTAGGK
0601: SFRVVNRSFM VTVSKNFLEI HLFWAGKGTD AIPIKGYYGP MISALRVTPN FTPTVRNGIP KRESKAGAIS GILIGAIVLV LAALFGVFTL IKKRRALAQQ
0701: KEELYNLVGR PDVFSYAELK LATDNFNSQN ILGEGGFGPV YKGKLPDERV IAVKQLSQSS HQGTSQFVTE VATISAVQHR NLVILHGCCI DSKTPLLVYE
0801: YLENGSLDRA IFGDSNLNLD WVMRFEIILG IARGLIYLHE ESSIRIVHRD IKASNVLLDT NLVPKISDFG LAKLYDENQT HVSTRIAGTL GYLAPEYAMR
0901: GHLSEKADIF AFGVVMLETV AGRPNTDNSL EESKICLLEW AWGLYEKDQA LGIVDPSLKE FGKDEAFRAI CVALVCTQGS PHQRPPMSKV VAMLTGDVDV
1001: AKVVTKPSYI TEWQLRGGGN SSNTTSS
Best Arabidopsis Sequence Match ( AT1G56120.1 )
(BLAST)
0001: MVRAQNRTRP TTHPDDARAL NSIFAAWKIR APREWNISGE LCSGVAIDAS VLDSNHAYNP LIKCDCSFQN STICRINNIK VYAIDVVGPI PPELWTLTYL
0101: TNLNLGQNYL TGSLSPAIGN LTRMQWMTFG INALSGPIPK EIGLLTDLRL LGISSNNFSG SLPAEIGSCT KLQQMYIDSS GLSGGIPLSF ANFVELEVAW
0201: IMDVELTGRI PDFIGFWTKL TTLRILGTGL SGPIPSSFSN LIALTELRLG DISNGSSSLD FIKDMKSLSV LVLRNNNLTG TIPSTIGGYT SLQQVDLSFN
0301: KLHGPIPASL FNLSRLTHLF LGNNTLNGSL PTLKGQSLSN LDVSYNDLSG SLPSWVSLPD LKLNLVANNF TLEGLDNRVL SGLHCLQKNF PCNRGEGICK
0401: CNKKIPSQIM FSMLNVQTYG QGSNVLLEKN CFKTFAIDWC LDYNFSINCG GPEIRSVSGA LFEKEDADLG PASFVVSAAK RWAASSVGNF AGSSNNIYIA
0501: TSLAQFINTM DSELFQSARL SASSLRYYGL GLENGGYTVT LQFAEVQIEG SNSWKGIGRR RFNIYVQGRL VEKDFDIRRT AGGSSVRAVQ REYKTNVSEN
0601: HLEVHLFWAG KGTCCIPIQG AYGPLIAAVS ATPDFTPTVA NRPPSKGKSR TGTIVGVIVG VGLLSIFAGV VILVIRKRRK PYTDDEEILS MDVKPYTFTY
0701: SELKNATQDF DLSNKLGEGG FGAVYKGNLN DGREVAVKQL SIGSRQGKGQ FVAEIIAISS VLHRNLVKLY GCCFEGDHRL LVYEYLPNGS LDQALFGDKS
0801: LHLDWSTRYE ICLGVARGLV YLHEEASVRI IHRDVKASNI LLDSELVPKV SDFGLAKLYD DKKTHISTRV AGTIGYLAPE YAMRGHLTEK TDVYAFGVVA
0901: LELVSGRKNS DENLEEGKKY LLEWAWNLHE KNRDVELIDD ELSEYNMEEV KRMIGIALLC TQSSYALRPP MSRVVAMLSG DAEVNDATSK PGYLTDCTFD
1001: DTTSSSFSNF QTKDTSFSTS FIAPGPEMPL RDGESKPMVG FKIKEGR
Arabidopsis Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.