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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • extracellular 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, extracellular, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:extracellular
PProwler:mitochondrion
YLoc:cytosol
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os05t0256100-01 Rice plasma membrane 54.73 65.04
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 51.85 47.28
Os05t0263100-00 Rice plasma membrane 85.6 40.51
Os04t0616282-00 Rice extracellular 10.7 40.0
GSMUA_Achr7P16620_001 Banana cytosol, plasma membrane, plastid 48.97 37.54
CDY38804 Canola golgi, plasma membrane 48.35 36.78
GSMUA_Achr2P17280_001 Banana plasma membrane 46.3 35.94
CDY11604 Canola plasma membrane 46.91 35.68
Bra016226.1-P Field mustard plasma membrane 37.45 32.97
Os08t0203400-01 Rice plasma membrane 69.34 32.91
Os08t0203700-01 Rice vacuole 69.14 32.84
Zm00001d024291_P001 Maize mitochondrion, nucleus, plasma membrane, plastid 70.99 32.55
KXG24697 Sorghum nucleus, plasma membrane, plastid, vacuole 71.19 32.43
GSMUA_Achr2P17300_001 Banana plasma membrane 45.88 32.37
Os05t0258400-00 Rice plasma membrane 43.83 31.14
Os08t0201500-01 Rice cytosol, extracellular, mitochondrion 7.2 29.91
Os04t0616300-01 Rice plasma membrane 60.7 28.78
Os04t0616500-01 Rice plasma membrane 59.05 28.03
VIT_12s0055g00580.t01 Wine grape plasma membrane 54.32 25.61
Os04t0616700-03 Rice plasma membrane 52.67 25.05
Solyc07g066550.2.1 Tomato plasma membrane 52.06 24.63
KRH44862 Soybean plasma membrane 52.06 24.47
KRH37939 Soybean plasma membrane 51.65 24.46
GSMUA_Achr8P07040_001 Banana plasma membrane 53.91 24.39
KRH44860 Soybean plasma membrane 50.41 23.67
Bra007909.1-P Field mustard plasma membrane 48.77 23.4
CDY10509 Canola plasma membrane 48.97 23.17
Bra030815.1-P Field mustard plasma membrane 48.77 23.12
CDY59119 Canola plasma membrane 47.33 22.91
CDX67736 Canola plasma membrane 47.12 22.81
Bra003333.1-P Field mustard plasma membrane 46.91 22.71
CDX98288 Canola plasma membrane 46.71 22.61
Bra035966.1-P Field mustard plasma membrane 47.12 22.54
CDY68250 Canola plasma membrane 47.12 22.54
CDY46490 Canola plasma membrane 47.12 22.54
Bra033958.1-P Field mustard plasma membrane 45.47 22.53
CDY10508 Canola plasma membrane 47.74 22.46
CDY42407 Canola plasma membrane 47.74 22.46
AT1G56140.1 Thale cress plasma membrane 47.53 22.36
AT1G56120.1 Thale cress cytosol 48.15 22.35
AT1G56130.2 Thale cress plasma membrane 47.33 22.29
Os09t0345300-01 Rice plasma membrane 32.3 22.24
Bra030813.1-P Field mustard plasma membrane 47.74 22.1
CDY47811 Canola plasma membrane 46.09 22.07
Bra033670.1-P Field mustard plasma membrane 45.68 21.87
CDY22357 Canola plasma membrane 45.47 21.77
AT1G56145.2 Thale cress plasma membrane 46.5 21.75
Os05t0256500-00 Rice plasma membrane 28.4 21.73
CDY25239 Canola plasma membrane 40.53 21.32
Os02t0232500-01 Rice extracellular, plasma membrane 31.48 21.28
Bra007907.1-P Field mustard plasma membrane 43.62 20.64
CDY12693 Canola plasma membrane 38.68 18.74
Os08t0203600-05 Rice plasma membrane 23.87 17.47
VIT_12s0055g00590.t01 Wine grape plasma membrane 54.12 12.49
Bra007908.1-P Field mustard cytosol 17.28 12.03
CDY03757 Canola plasma membrane 48.77 11.6
CDY43003 Canola plasma membrane 47.94 11.11
Os04t0616400-02 Rice plasma membrane 12.76 9.45
Os08t0203201-00 Rice cytosol 0.0 0.0
Os08t0201700-00 Rice plasma membrane 0.0 0.0
CDX81476 Canola cytosol 0.0 0.0
Os04t0616200-01 Rice plasma membrane 0.0 0.0
Protein Annotations
Gene3D:3.80.10.10MapMan:35.1ProteinID:BAF16955.1ProteinID:BAS93058.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538InterPro:IPR001611InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Malectin
EnsemblPlantsGene:Os05g0261700EnsemblPlants:Os05t0261700-02PFAM:PF00560PFAM:PF11721PANTHER:PTHR27006PANTHER:PTHR27006:SF52
UniProt:Q0DJL8SUPFAM:SSF52058UniParc:UPI0000E123DBSEG:seg::
Description
Hypothetical conserved gene. (Os05t0261700-01);Leucine-rich repeat, plant specific containing protein. (Os05t0261700-02)
Coordinates
chr5:-:10114810..10125806
Molecular Weight (calculated)
53200.0 Da
IEP (calculated)
4.756
GRAVY (calculated)
-0.061
Length
486 amino acids
Sequence
(BLAST)
001: INHAAAALNT ILGRWGKKAS PEWNISGELC SGFAADKTDW DNYRDINPFI KCDCTFNNNT LCHITRLRVT YLDVVGQIPA ELQNLTHLVD LNLFRNYLTG
101: PIPSFIGKFT SMQYLSLSFN PLSGLLPKEL GNLTNLLSLG ISSDNFTGSL PEELGNLTKL QQLYFDSSGF SGPFPSSFSK LQNLKFLSAS DNVFKGKIPA
201: YLGTMTNLED IAFHGNSFEG PVPESLSNLT KLTRLWIGDI INGVSPLAFI SNMASLSTLI LRNCKISSDL GAVEFSMFKQ LKLLDLSFNN ITGEVPQSIL
301: NLGNLNSLFL GNNSLTGKLP DGISSSLKVI DFSYNQLTGS IPSWARQNNL QLNLVANNFL LDTTSESTLP WGINCLQQDT PCFRGSPEYY SFAVDCGSNA
401: SIRGSDDTIY EADPTNLGAA TYYVTGQTRW GVSSVGNAID AKNIIYSSQP FQNVVDSELF ETARMSSSSL RYYGLGLENG NYTVLL
Best Arabidopsis Sequence Match ( AT1G56120.1 )
(BLAST)
0001: MVRAQNRTRP TTHPDDARAL NSIFAAWKIR APREWNISGE LCSGVAIDAS VLDSNHAYNP LIKCDCSFQN STICRINNIK VYAIDVVGPI PPELWTLTYL
0101: TNLNLGQNYL TGSLSPAIGN LTRMQWMTFG INALSGPIPK EIGLLTDLRL LGISSNNFSG SLPAEIGSCT KLQQMYIDSS GLSGGIPLSF ANFVELEVAW
0201: IMDVELTGRI PDFIGFWTKL TTLRILGTGL SGPIPSSFSN LIALTELRLG DISNGSSSLD FIKDMKSLSV LVLRNNNLTG TIPSTIGGYT SLQQVDLSFN
0301: KLHGPIPASL FNLSRLTHLF LGNNTLNGSL PTLKGQSLSN LDVSYNDLSG SLPSWVSLPD LKLNLVANNF TLEGLDNRVL SGLHCLQKNF PCNRGEGICK
0401: CNKKIPSQIM FSMLNVQTYG QGSNVLLEKN CFKTFAIDWC LDYNFSINCG GPEIRSVSGA LFEKEDADLG PASFVVSAAK RWAASSVGNF AGSSNNIYIA
0501: TSLAQFINTM DSELFQSARL SASSLRYYGL GLENGGYTVT LQFAEVQIEG SNSWKGIGRR RFNIYVQGRL VEKDFDIRRT AGGSSVRAVQ REYKTNVSEN
0601: HLEVHLFWAG KGTCCIPIQG AYGPLIAAVS ATPDFTPTVA NRPPSKGKSR TGTIVGVIVG VGLLSIFAGV VILVIRKRRK PYTDDEEILS MDVKPYTFTY
0701: SELKNATQDF DLSNKLGEGG FGAVYKGNLN DGREVAVKQL SIGSRQGKGQ FVAEIIAISS VLHRNLVKLY GCCFEGDHRL LVYEYLPNGS LDQALFGDKS
0801: LHLDWSTRYE ICLGVARGLV YLHEEASVRI IHRDVKASNI LLDSELVPKV SDFGLAKLYD DKKTHISTRV AGTIGYLAPE YAMRGHLTEK TDVYAFGVVA
0901: LELVSGRKNS DENLEEGKKY LLEWAWNLHE KNRDVELIDD ELSEYNMEEV KRMIGIALLC TQSSYALRPP MSRVVAMLSG DAEVNDATSK PGYLTDCTFD
1001: DTTSSSFSNF QTKDTSFSTS FIAPGPEMPL RDGESKPMVG FKIKEGR
Arabidopsis Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.