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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • endoplasmic reticulum 4
  • golgi 4
  • extracellular 4
  • vacuole 3
  • plasma membrane 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G56130.2 Thale cress plasma membrane 87.9 87.98
CDY42407 Canola plasma membrane 86.74 86.74
CDY10508 Canola plasma membrane 86.25 86.25
Bra030813.1-P Field mustard plasma membrane 86.64 85.24
AT1G56120.1 Thale cress cytosol 82.87 81.76
CDY10509 Canola plasma membrane 80.74 81.21
Bra030815.1-P Field mustard plasma membrane 79.77 80.39
CDX81476 Canola cytosol 21.1 76.76
CDY47811 Canola plasma membrane 74.93 76.26
Bra033958.1-P Field mustard plasma membrane 72.22 76.04
CDY46490 Canola plasma membrane 74.25 75.49
Bra035966.1-P Field mustard plasma membrane 74.25 75.49
CDY68250 Canola plasma membrane 74.06 75.3
Bra033670.1-P Field mustard plasma membrane 73.96 75.27
CDY22357 Canola plasma membrane 73.86 75.17
CDY25239 Canola plasma membrane 65.83 73.59
CDY12693 Canola plasma membrane 68.25 70.29
AT1G56145.2 Thale cress plasma membrane 67.76 67.37
VIT_12s0055g00580.t01 Wine grape plasma membrane 62.83 62.95
KRH44862 Soybean plasma membrane 62.92 62.86
KRH44860 Soybean plasma membrane 62.25 62.13
Solyc07g066550.2.1 Tomato plasma membrane 61.57 61.93
KRH37939 Soybean plasma membrane 59.44 59.84
Zm00001d002312_P004 Maize cytosol 30.59 54.96
Os04t0616200-01 Rice plasma membrane 17.43 54.88
Os04t0616300-01 Rice plasma membrane 53.82 54.24
Os08t0203600-05 Rice plasma membrane 34.85 54.22
TraesCS4A01G449700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 45.4 54.09
Os04t0616500-01 Rice plasma membrane 53.53 54.0
HORVU2Hr1G098450.3 Barley vacuole 52.95 53.37
TraesCS2D01G415700.1 Wheat plasma membrane 52.18 53.21
TraesCS2A01G418300.1 Wheat plasma membrane 52.08 53.11
TraesCS2B01G437200.1 Wheat plasma membrane 51.98 52.96
HORVU2Hr1G098390.1 Barley plasma membrane 52.08 52.9
TraesCS2D01G415600.1 Wheat plasma membrane 51.98 52.85
TraesCS2A01G418200.1 Wheat plasma membrane, vacuole 51.89 52.81
TraesCS2B01G437300.2 Wheat plasma membrane 52.18 52.79
OQU82325 Sorghum plasma membrane 52.27 52.17
Zm00001d026306_P009 Maize plasma membrane 51.89 52.14
Os08t0203700-01 Rice vacuole 51.6 52.1
TraesCS7D01G034800.1 Wheat plasma membrane 50.63 51.99
TraesCS7A01G038600.1 Wheat plasma membrane 50.63 51.83
HORVU7Hr1G006940.9 Barley cytosol 50.63 51.48
GSMUA_Achr2P17280_001 Banana plasma membrane 31.17 51.44
Os08t0203400-01 Rice plasma membrane 50.92 51.37
GSMUA_Achr8P07040_001 Banana plasma membrane 53.34 51.3
KXG24697 Sorghum nucleus, plasma membrane, plastid, vacuole 52.57 50.89
Zm00001d024291_P001 Maize mitochondrion, nucleus, plasma membrane, plastid 52.18 50.85
GSMUA_Achr7P16620_001 Banana cytosol, plasma membrane, plastid 30.69 50.0
Os04t0616400-02 Rice plasma membrane 31.75 50.0
KXG27116 Sorghum plasma membrane 50.73 49.72
Os05t0256500-00 Rice plasma membrane 30.49 49.61
TraesCS2A01G418400.1 Wheat plasma membrane 50.34 49.43
Os05t0263100-00 Rice plasma membrane 49.08 49.37
TraesCS2D01G415800.1 Wheat plasma membrane 50.15 49.29
Os04t0616700-03 Rice plasma membrane 48.69 49.22
TraesCS2B01G437400.2 Wheat plasma membrane 50.34 48.96
Zm00001d026303_P004 Maize cytosol 47.63 48.91
Os05t0258400-00 Rice plasma membrane 32.24 48.68
TraesCS4A01G450300.1 Wheat endoplasmic reticulum, extracellular, vacuole 25.85 48.63
TraesCS3D01G418900.2 Wheat plasma membrane, plastid 35.53 48.29
HORVU3Hr1G093550.9 Barley plasma membrane 47.53 47.62
Os05t0261700-02 Rice cytosol, plasma membrane 22.36 47.53
HORVU2Hr1G098400.8 Barley plasma membrane, plastid 49.27 47.35
GSMUA_Achr2P17300_001 Banana plasma membrane 31.36 47.02
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 24.1 46.72
TraesCS3B01G459300.1 Wheat extracellular, plasma membrane, vacuole 28.75 46.62
Zm00001d002313_P003 Maize extracellular, plasma membrane 24.69 46.2
TraesCS3A01G423600.1 Wheat plasma membrane 31.75 45.87
Os05t0256100-01 Rice plasma membrane 18.1 45.72
TraesCS3B01G459200.1 Wheat plasma membrane 39.11 45.65
HORVU2Hr1G098430.3 Barley plastid 21.3 42.55
Os08t0203201-00 Rice cytosol 4.65 40.0
AT1G53420.1 Thale cress plasma membrane 36.4 39.45
AT1G53440.1 Thale cress plasma membrane 39.5 39.42
AT1G53430.1 Thale cress plasma membrane 39.59 39.4
AT3G14840.2 Thale cress plasma membrane 38.53 39.02
AT1G07650.2 Thale cress plasma membrane 38.14 38.63
AT1G29730.2 Thale cress plasma membrane 36.11 37.26
AT1G29720.1 Thale cress plasma membrane 36.69 37.19
Os04t0616282-00 Rice extracellular 4.65 36.92
AT1G29750.2 Thale cress plasma membrane 35.91 36.34
AT1G29740.1 Thale cress plasma membrane 35.53 34.04
VIT_12s0055g00590.t01 Wine grape plasma membrane 62.25 30.55
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:842066
ProteinID:AAF02840.1ProteinID:AAG50909.1ProteinID:AEE33348.1EMBL:AK228283ArrayExpress:AT1G56140EnsemblPlantsGene:AT1G56140
RefSeq:AT1G56140TAIR:AT1G56140RefSeq:AT1G56140-TAIR-GEnsemblPlants:AT1G56140.1TAIR:AT1G56140.1Unigene:At.42833
EMBL:BT011697EMBL:BT012256UniProt:C0LGH3EMBL:FJ708663GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:MalectinRefSeq:NP_564709.2PFAM:PF07714PFAM:PF11721
PFAM:PF13855PO:PO:0000293PO:PO:0005052ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006
PANTHER:PTHR27006:SF95InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001B9E75FSEG:seg:
Description
Probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH3]
Coordinates
chr1:-:21001269..21007855
Molecular Weight (calculated)
113761.0 Da
IEP (calculated)
6.781
GRAVY (calculated)
-0.122
Length
1033 amino acids
Sequence
(BLAST)
0001: MLRLWRYLCL LLTVWFLCNF GPVYVVRAQN RTGATTHPDE ALALNSIFAA WRIRAPREWN ISGELCSGAA IDASVLDSNP AYNPLIKCDC SFENSTICRI
0101: TNIKVYAMEV VGSIPQQLWT LEYLTNLNLG QNVLTGSLPP ALGNLTRMRW MTFGINALSG PIPKEIGLLT DLRLLSISSN NFSGSIPDEI GRCTKLQQIY
0201: IDSSGLSGGL PVSFANLVEL EQAWIADMEL TGQIPDFIGD WTKLTTLRIL GTGLSGPIPA SFSNLTSLTE LRLGDISNGN SSLEFIKDMK SLSILVLRNN
0301: NLTGTIPSNI GEYSSLRQLD LSFNKLHGTI PASLFNLRQL THLFLGNNTL NGSLPTQKGQ SLSNVDVSYN DLSGSLPSWV SLPNLNLNLV ANNFTLEGLD
0401: NRVLSGLNCL QKNFPCNRGK GIYSDFSINC GGPEIRSVTE AVFEREDEDL GPASFVVSAG QRWAASSVGL FAGSSNNIYI STSQSQFVNT LDSELFQSAR
0501: LSASSLRYYG LGLENGGYTV TLQFAEIQIL GSTSNTWRGL GRRRFDIYVQ GRLVEKDFDV RRTAGDSTVR AVQREYKANV SQNHLEIHLF WAGKGTCCIP
0601: IQGAYGPLIS AVGATPDFTP TVGNRPPSKG KSMTGTIVGV IVGVGLLSII SGVVIFIIRK RRKRYTDDEE ILSMDVKPYT FTYSELKSAT QDFDPSNKLG
0701: EGGFGPVYKG KLNDGREVAV KLLSVGSRQG KGQFVAEIVA ISAVQHRNLV KLYGCCYEGE HRLLVYEYLP NGSLDQALFG EKTLHLDWST RYEICLGVAR
0801: GLVYLHEEAR LRIVHRDVKA SNILLDSKLV PKVSDFGLAK LYDDKKTHIS TRVAGTIGYL APEYAMRGHL TEKTDVYAFG VVALELVSGR PNSDENLEDE
0901: KRYLLEWAWN LHEKGREVEL IDHQLTEFNM EEGKRMIGIA LLCTQTSHAL RPPMSRVVAM LSGDVEVSDV TSKPGYLTDW RFDDTTASSI SGFPLRNTQA
1001: SESFTSFVAP RSEISPRNND ARPMLGAQMN EGR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.