Factsheet for TraesCS3A01G423600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 5
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G459300.1	Wheat	extracellular, plasma membrane, vacuole	77.62	87.13
HORVU3Hr1G093550.9	Barley	plasma membrane	85.87	59.55
TraesCS4A01G450300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	45.31	59.02
TraesCS3D01G418900.2	Wheat	plasma membrane, plastid	55.94	52.63
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	38.32	51.41
TraesCS3B01G459200.1	Wheat	plasma membrane	63.5	51.3
GSMUA_Achr7P16620_001	Banana	cytosol, plasma membrane, plastid	45.17	50.95
GSMUA_Achr2P17280_001	Banana	plasma membrane	43.5	49.68
CDY38804	Canola	golgi, plasma membrane	41.96	46.95
CDY11604	Canola	plasma membrane	41.68	46.64
Bra016226.1-P	Field mustard	plasma membrane	35.24	45.65
GSMUA_Achr2P17300_001	Banana	plasma membrane	43.22	44.85
TraesCS2A01G418200.1	Wheat	plasma membrane, vacuole	61.4	43.25
TraesCS2A01G418300.1	Wheat	plasma membrane	60.56	42.74
TraesCS7A01G038600.1	Wheat	plasma membrane	59.02	41.82
TraesCS4A01G449700.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	49.09	40.48
TraesCS2A01G418400.1	Wheat	plasma membrane	57.62	39.16
VIT_12s0055g00580.t01	Wine grape	plasma membrane	51.05	35.4
Solyc07g066550.2.1	Tomato	plasma membrane	49.65	34.57
KRH44862	Soybean	plasma membrane	49.93	34.53
KRH44860	Soybean	plasma membrane	49.51	34.2
KRH37939	Soybean	plasma membrane	48.53	33.82
Bra007909.1-P	Field mustard	plasma membrane	46.29	32.68
GSMUA_Achr8P07040_001	Banana	plasma membrane	48.81	32.5
CDY10508	Canola	plasma membrane	46.57	32.24
Bra030815.1-P	Field mustard	plasma membrane	46.15	32.2
CDY42407	Canola	plasma membrane	46.43	32.14
CDY10509	Canola	plasma membrane	45.87	31.94
AT1G56140.1	Thale cress	plasma membrane	45.87	31.75
Bra030813.1-P	Field mustard	plasma membrane	46.43	31.62
AT1G56130.2	Thale cress	plasma membrane	45.59	31.59
CDY59119	Canola	plasma membrane	43.92	31.27
Bra003333.1-P	Field mustard	plasma membrane	43.92	31.27
CDX67736	Canola	plasma membrane	43.78	31.18
Bra033958.1-P	Field mustard	plasma membrane	42.52	30.99
CDX98288	Canola	plasma membrane	43.5	30.98
AT1G56120.1	Thale cress	cytosol	45.03	30.75
CDY46490	Canola	plasma membrane	43.5	30.61
Bra035966.1-P	Field mustard	plasma membrane	43.5	30.61
AT1G56145.2	Thale cress	plasma membrane	44.48	30.61
CDY68250	Canola	plasma membrane	43.08	30.32
CDY22357	Canola	plasma membrane	42.66	30.05
CDY47811	Canola	plasma membrane	42.66	30.05
Bra007907.1-P	Field mustard	plasma membrane	43.08	29.99
Bra033670.1-P	Field mustard	plasma membrane	42.52	29.95
CDY25239	Canola	plasma membrane	37.62	29.11
CDY12693	Canola	plasma membrane	38.18	27.22
Bra007908.1-P	Field mustard	cytosol	23.78	24.36
TraesCS5A01G186500.1	Wheat	plasma membrane	32.03	22.65
VIT_12s0055g00590.t01	Wine grape	plasma membrane	51.89	17.62
CDY03757	Canola	plasma membrane	45.87	16.05
CDY43003	Canola	plasma membrane	45.31	15.44
CDX81476	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS3A01G423600.1	EnsemblPlantsGene:TraesCS3A01G423600	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Malectin	PANTHER:PTHR27006	PANTHER:PTHR27006:SF52	PFAM:PF00560	PFAM:PF11721	PFAM:PF13855
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr3A:-:665981616..665987146

Molecular Weight (calculated)

78467.3 Da

IEP (calculated)

6.097

GRAVY (calculated)

-0.047

Length

715 amino acids

Sequence
(BLAST)

001: MRRRHELLVS PSCCLIGLVL LLLALSARAQ RQAQTGPSEV AALNTIFSRW GLRASTAWNI SGEPCSGAAI NETAMDSDNE FNPAINCVCS YNISTVCHIT
101: RLRVYALDVV GQIPAELLNL TYLTVLDLSQ NYLTGSLPAF LGKLTRLQYL SLSINALTGV LPSELGNLKN LISLGVSTNK FVGPLPEVVE NLTKLEQLYI
201: DSCGLSGELP SSFSKLKNLK SLWASDNGFT GKIPDYIGSL SNLQDLRLHG NNFDGPIPAS FSNLINLTNL RIGDLTGELS SLAFVVNMTS LYTLDLRNSR
301: ISDNLASVDF SKFVNLNYLD LSFNSITGKV TPNLLNLNPL EFLFLGSNNL SGILPDMISP SLTTIDLSYN MLSGRYPSWV NMNNLHVNLV WNNFGIDNSN
401: NSILPSGLNC LQRDTPCFDS PSYSSFAVDS GGSRPIRGSD NSIYEPDDAS LPVASYYVTN STRWGVSNIG RFMDSSNGSY IIYTSRRFTN TLDSELFQTA
501: RMSPSSLRYY GIGLKNGMYS VVLQFAEIFF PDDQTWKSMG KRIFNIYIQG DLKETDFDIK KQTNGKSYTA VQRQYTVEVT NNFIDIHLFW AGKGTCCIPD
601: QGFYGPSISA LSVSSYDGNG EGDPGSQRNS TTSRTGLVVG VVVCVAILGF LALAGAFVWR QKRRRLEVEM EELFSIVGRP NVFSYGEIKS AADSFSDSNI
701: LGRGGYGPVY KARQT

Best Arabidopsis Sequence Match ( AT1G56120.1 )
(BLAST)

0001: MVRAQNRTRP TTHPDDARAL NSIFAAWKIR APREWNISGE LCSGVAIDAS VLDSNHAYNP LIKCDCSFQN STICRINNIK VYAIDVVGPI PPELWTLTYL
0101: TNLNLGQNYL TGSLSPAIGN LTRMQWMTFG INALSGPIPK EIGLLTDLRL LGISSNNFSG SLPAEIGSCT KLQQMYIDSS GLSGGIPLSF ANFVELEVAW
0201: IMDVELTGRI PDFIGFWTKL TTLRILGTGL SGPIPSSFSN LIALTELRLG DISNGSSSLD FIKDMKSLSV LVLRNNNLTG TIPSTIGGYT SLQQVDLSFN
0301: KLHGPIPASL FNLSRLTHLF LGNNTLNGSL PTLKGQSLSN LDVSYNDLSG SLPSWVSLPD LKLNLVANNF TLEGLDNRVL SGLHCLQKNF PCNRGEGICK
0401: CNKKIPSQIM FSMLNVQTYG QGSNVLLEKN CFKTFAIDWC LDYNFSINCG GPEIRSVSGA LFEKEDADLG PASFVVSAAK RWAASSVGNF AGSSNNIYIA
0501: TSLAQFINTM DSELFQSARL SASSLRYYGL GLENGGYTVT LQFAEVQIEG SNSWKGIGRR RFNIYVQGRL VEKDFDIRRT AGGSSVRAVQ REYKTNVSEN
0601: HLEVHLFWAG KGTCCIPIQG AYGPLIAAVS ATPDFTPTVA NRPPSKGKSR TGTIVGVIVG VGLLSIFAGV VILVIRKRRK PYTDDEEILS MDVKPYTFTY
0701: SELKNATQDF DLSNKLGEGG FGAVYKGNLN DGREVAVKQL SIGSRQGKGQ FVAEIIAISS VLHRNLVKLY GCCFEGDHRL LVYEYLPNGS LDQALFGDKS
0801: LHLDWSTRYE ICLGVARGLV YLHEEASVRI IHRDVKASNI LLDSELVPKV SDFGLAKLYD DKKTHISTRV AGTIGYLAPE YAMRGHLTEK TDVYAFGVVA
0901: LELVSGRKNS DENLEEGKKY LLEWAWNLHE KNRDVELIDD ELSEYNMEEV KRMIGIALLC TQSSYALRPP MSRVVAMLSG DAEVNDATSK PGYLTDCTFD
1001: DTTSSSFSNF QTKDTSFSTS FIAPGPEMPL RDGESKPMVG FKIKEGR

Arabidopsis Description

Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4I3K0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.