Factsheet for VIT_12s0055g00580.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44862	Soybean	plasma membrane	70.51	70.31
Solyc07g066550.2.1	Tomato	plasma membrane	69.45	69.72
KRH44860	Soybean	plasma membrane	68.87	68.6
KRH37939	Soybean	plasma membrane	67.99	68.32
VIT_10s0092g00470.t01	Wine grape	cytosol	63.14	65.62
CDX81476	Canola	cytosol	17.94	65.14
VIT_00s0125g00210.t01	Wine grape	cytosol	37.05	63.99
Bra007908.1-P	Field mustard	cytosol	43.16	63.75
Bra007909.1-P	Field mustard	plasma membrane	62.08	63.18
AT1G56140.1	Thale cress	plasma membrane	62.95	62.83
CDY42407	Canola	plasma membrane	62.95	62.83
CDY10508	Canola	plasma membrane	62.66	62.54
AT1G56130.2	Thale cress	plasma membrane	62.46	62.4
VIT_10s0092g00590.t01	Wine grape	plasma membrane	62.85	61.83
CDY10509	Canola	plasma membrane	61.59	61.83
Bra030813.1-P	Field mustard	plasma membrane	62.85	61.71
Bra030815.1-P	Field mustard	plasma membrane	61.3	61.66
CDY38804	Canola	golgi, plasma membrane	37.92	61.19
AT1G56120.1	Thale cress	cytosol	61.49	60.55
Bra035966.1-P	Field mustard	plasma membrane	59.65	60.53
CDY46490	Canola	plasma membrane	59.65	60.53
CDY68250	Canola	plasma membrane	59.36	60.24
VIT_10s0092g00710.t01	Wine grape	plasma membrane	58.49	60.12
CDY11604	Canola	plasma membrane	37.25	60.09
Bra033958.1-P	Field mustard	plasma membrane	56.94	59.84
Bra007907.1-P	Field mustard	plasma membrane	59.46	59.69
Os04t0616200-01	Rice	plasma membrane	18.91	59.45
CDY25239	Canola	plasma membrane	53.25	59.42
Bra033670.1-P	Field mustard	plasma membrane	58.39	59.31
CDY47811	Canola	plasma membrane	58.39	59.31
Bra003333.1-P	Field mustard	plasma membrane	57.71	59.26
Bra016226.1-P	Field mustard	plasma membrane	31.72	59.24
CDY22357	Canola	plasma membrane	58.29	59.21
VIT_00s0125g00090.t01	Wine grape	plasma membrane	57.42	59.2
CDX67736	Canola	plasma membrane	57.61	59.16
CDY59119	Canola	plasma membrane	57.61	59.16
CDX98288	Canola	plasma membrane	57.42	58.96
AT1G56145.2	Thale cress	plasma membrane	59.17	58.71
Os08t0203600-05	Rice	plasma membrane	37.25	57.83
Zm00001d002312_P004	Maize	cytosol	32.01	57.39
Os08t0203400-01	Rice	plasma membrane	56.94	57.32
GSMUA_Achr7P16620_001	Banana	cytosol, plasma membrane, plastid	35.21	57.26
GSMUA_Achr2P17280_001	Banana	plasma membrane	34.72	57.19
TraesCS4A01G449700.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	48.01	57.09
TraesCS2D01G415700.1	Wheat	plasma membrane	55.97	56.96
VIT_00s0125g00140.t01	Wine grape	cytosol	38.51	56.96
Os04t0616300-01	Rice	plasma membrane	56.55	56.88
TraesCS2A01G418300.1	Wheat	plasma membrane	55.67	56.66
OQU82325	Sorghum	plasma membrane	56.84	56.62
KXG24697	Sorghum	nucleus, plasma membrane, plastid, vacuole	58.58	56.61
TraesCS2D01G415600.1	Wheat	plasma membrane	55.77	56.59
TraesCS2A01G418200.1	Wheat	plasma membrane, vacuole	55.67	56.55
GSMUA_Achr8P07040_001	Banana	plasma membrane	58.78	56.42
Zm00001d024291_P001	Maize	mitochondrion, nucleus, plasma membrane, plastid	58.0	56.42
TraesCS2B01G437200.1	Wheat	plasma membrane	55.48	56.41
HORVU2Hr1G098390.1	Barley	plasma membrane	55.58	56.34
TraesCS2B01G437300.2	Wheat	plasma membrane	55.67	56.22
Zm00001d026306_P009	Maize	plasma membrane	55.77	55.93
Os08t0203700-01	Rice	vacuole	55.48	55.91
HORVU2Hr1G098450.3	Barley	vacuole	55.58	55.9
CDY12693	Canola	plasma membrane	54.32	55.83
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane	28.81	55.72
TraesCS7D01G034800.1	Wheat	plasma membrane	54.32	55.67
HORVU7Hr1G006940.9	Barley	cytosol	54.8	55.61
Os04t0616500-01	Rice	plasma membrane	55.19	55.57
TraesCS7A01G038600.1	Wheat	plasma membrane	54.22	55.4
Os05t0261700-02	Rice	cytosol, plasma membrane	25.61	54.32
Os05t0263100-00	Rice	plasma membrane	54.03	54.24
TraesCS2A01G418400.1	Wheat	plasma membrane	55.0	53.9
TraesCS4A01G450300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	28.61	53.73
HORVU3Hr1G093550.9	Barley	plasma membrane	53.54	53.54
Os05t0258400-00	Rice	plasma membrane	35.5	53.51
TraesCS3D01G418900.2	Wheat	plasma membrane, plastid	39.38	53.42
TraesCS2D01G415800.1	Wheat	plasma membrane	54.41	53.38
KXG27116	Sorghum	plasma membrane	54.51	53.32
TraesCS2B01G437400.2	Wheat	plasma membrane	54.7	53.11
Os05t0256500-00	Rice	plasma membrane	32.59	52.91
Os04t0616400-02	Rice	plasma membrane	33.37	52.44
Os04t0616700-03	Rice	plasma membrane	51.79	52.25
Os05t0256100-01	Rice	plasma membrane	20.66	52.08
Zm00001d026303_P004	Maize	cytosol	50.73	51.99
GSMUA_Achr2P17300_001	Banana	plasma membrane	34.72	51.96
HORVU2Hr1G098400.8	Barley	plasma membrane, plastid	54.12	51.91
Zm00001d002313_P003	Maize	extracellular, plasma membrane	27.55	51.45
TraesCS3B01G459300.1	Wheat	extracellular, plasma membrane, vacuole	31.62	51.18
TraesCS3A01G423600.1	Wheat	plasma membrane	35.4	51.05
TraesCS3B01G459200.1	Wheat	plasma membrane	42.68	49.72
HORVU2Hr1G098430.3	Barley	plastid	23.47	46.81
VIT_12s0055g00590.t01	Wine grape	plasma membrane	94.76	46.41
VIT_19s0014g00750.t01	Wine grape	plasma membrane	21.24	46.01
VIT_19s0014g00530.t01	Wine grape	plasma membrane	21.92	45.84
VIT_19s0014g00790.t01	Wine grape	cytosol, nucleus, plasma membrane	38.12	44.66
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	20.08	43.95
VIT_10s0003g02000.t01	Wine grape	plasma membrane	29.97	42.68
Os08t0203201-00	Rice	cytosol	4.95	42.5
VIT_19s0014g00470.t01	Wine grape	plasma membrane	41.22	42.2
VIT_10s0003g01920.t01	Wine grape	plasma membrane	38.6	41.98
VIT_19s0014g00520.t01	Wine grape	plasma membrane	40.74	41.54
VIT_12s0028g01350.t01	Wine grape	plasma membrane	40.54	41.35
VIT_19s0014g00680.t01	Wine grape	plasma membrane	40.93	41.33
VIT_19s0014g00500.t01	Wine grape	plasma membrane	40.83	41.11
VIT_10s0003g01940.t01	Wine grape	plasma membrane, plastid, vacuole	30.84	40.61
VIT_10s0003g01990.t01	Wine grape	plasma membrane	35.79	40.2
Os04t0616282-00	Rice	extracellular	5.04	40.0
VIT_19s0014g00810.t01	Wine grape	plasma membrane, plastid	39.48	39.9
VIT_10s0003g01880.t01	Wine grape	cytosol	37.15	39.81
VIT_10s0003g01860.t01	Wine grape	plastid, vacuole	25.8	38.72
VIT_10s0003g01980.t01	Wine grape	cytosol	35.89	36.49
CDY03757	Canola	plasma membrane	62.37	31.47
CDY43003	Canola	plasma membrane	63.24	31.08
VIT_19s0014g00830.t01	Wine grape	plasma membrane	42.1	26.5
VIT_10s0003g01900.t01	Wine grape	plasma membrane	34.34	23.43

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100262365	wikigene:100262365	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20
Gene3D:3.80.10.10	ProteinID:CBI20015	ProteinID:CBI20015.3	ncoils:Coil	UniProt:D7STA1	EMBL:FN595228
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004190	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0016787	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100262365	wikigene:LOC100262365	InterPro:LRR_dom_sf
InterPro:Malectin	PFAM:PF00069	PFAM:PF11721	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006
PANTHER:PTHR27006:SF95	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI0001984608	ArrayExpress:VIT_12s0055g00580	EnsemblPlantsGene:VIT_12s0055g00580	EnsemblPlants:VIT_12s0055g00580.t01	unigene:Vvi.24389
RefSeq:XP_002267129	RefSeq:XP_002267129.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr12:-:13624743..13636163

Molecular Weight (calculated)

112965.0 Da

IEP (calculated)

4.601

GRAVY (calculated)

-0.123

Length

1031 amino acids

Sequence
(BLAST)

0001: MKLVPGAQSV RCIFVALCSV YVIGLFHIAV AQTTEANATT DPSEVRVLNS IFQQWGISAS NQWNTSGEPC TGAAIDSTSI DSSDYNPGIK CDCSYDNAST
0101: CHITQLKVYA LDVVGVIPDE LWNLTFLTNL NLGQNYLTGP LSASIGNLTS MQYLSMGINA LSGELPKELG QLTDLRSLAF GTNNFSGSLP SEIGNLVKLE
0201: QLYFDSSGVS GEIPSTFANL QSLTTVWASD NELTGNIPDF IGNWSKLTVL RLQGNSFEGA IPSSFSNLTS LTDLMVSDIS NASSSSLEFI KDMKLLSTLV
0301: LRNNNISDSI PSNIGEYGSL TQLDLSFNNL SGQLPESLFN LSQLSLLFLG NNQLTGTLPS LKSTSLLNID LSYNGLSGSF PSWVDEENLQ LNLVANNFTL
0401: DSSNSSVLPS GLNCLQQNFP CNKGSGIYYN FAIKCGGPQI TSSDQIVFER DNETLGPATY YVTDTNRWAV SNVGLFSGSN NPQYTSRSSS QFTNTLDSEL
0501: FQTARISAGS LRYYGLGLEN GNYNLTLQFA ETAIVNSNSW KSLGRRVFDI YIQGDLVLKD FDIRKEAGGV SFQAVKKEFT AQVLENYIEI HLFWAGKRTC
0601: CVPAQGTYGP SISAISATPN FEPTVPNTAP NGKKNWTGLI VGIAVALGLV CFLAVFSVYY FVLRRKKPYE NQDEELLGMD ARPYTFSYAE LKNATGDFSP
0701: SNKLGEGGFG PVYKGTLSDG RVVAVKQLSV SSHQGKNQFV TEIATISAVQ HRNLVKLYGC CIEGVNRSLV YEYLENKSLD QALFGEGNLD LVWPTRYDIC
0801: LGVARGLAYL HEESRLRIVH RDVKASNILL DYYLNPKISD FGLAKLYDDT KTHISTRVAG TIGYLAPEYA MRGHLTEKAD VFGFGVVALE IVSGRPNSDT
0901: SLEEEKTYLL EWAWQLHETN REIELVDSRL SEFSEEEARR MIGVALLCTQ TSPTLRPPMS RVVAMLSGDI EVSRVTTKPG YLTDWKFNDV SSFMSENSDL
1001: NSPSISMEVD RDSSPLTVNK TELHEIIGEG R

Best Arabidopsis Sequence Match ( AT1G56140.1 )
(BLAST)

0001: MLRLWRYLCL LLTVWFLCNF GPVYVVRAQN RTGATTHPDE ALALNSIFAA WRIRAPREWN ISGELCSGAA IDASVLDSNP AYNPLIKCDC SFENSTICRI
0101: TNIKVYAMEV VGSIPQQLWT LEYLTNLNLG QNVLTGSLPP ALGNLTRMRW MTFGINALSG PIPKEIGLLT DLRLLSISSN NFSGSIPDEI GRCTKLQQIY
0201: IDSSGLSGGL PVSFANLVEL EQAWIADMEL TGQIPDFIGD WTKLTTLRIL GTGLSGPIPA SFSNLTSLTE LRLGDISNGN SSLEFIKDMK SLSILVLRNN
0301: NLTGTIPSNI GEYSSLRQLD LSFNKLHGTI PASLFNLRQL THLFLGNNTL NGSLPTQKGQ SLSNVDVSYN DLSGSLPSWV SLPNLNLNLV ANNFTLEGLD
0401: NRVLSGLNCL QKNFPCNRGK GIYSDFSINC GGPEIRSVTE AVFEREDEDL GPASFVVSAG QRWAASSVGL FAGSSNNIYI STSQSQFVNT LDSELFQSAR
0501: LSASSLRYYG LGLENGGYTV TLQFAEIQIL GSTSNTWRGL GRRRFDIYVQ GRLVEKDFDV RRTAGDSTVR AVQREYKANV SQNHLEIHLF WAGKGTCCIP
0601: IQGAYGPLIS AVGATPDFTP TVGNRPPSKG KSMTGTIVGV IVGVGLLSII SGVVIFIIRK RRKRYTDDEE ILSMDVKPYT FTYSELKSAT QDFDPSNKLG
0701: EGGFGPVYKG KLNDGREVAV KLLSVGSRQG KGQFVAEIVA ISAVQHRNLV KLYGCCYEGE HRLLVYEYLP NGSLDQALFG EKTLHLDWST RYEICLGVAR
0801: GLVYLHEEAR LRIVHRDVKA SNILLDSKLV PKVSDFGLAK LYDDKKTHIS TRVAGTIGYL APEYAMRGHL TEKTDVYAFG VVALELVSGR PNSDENLEDE
0901: KRYLLEWAWN LHEKGREVEL IDHQLTEFNM EEGKRMIGIA LLCTQTSHAL RPPMSRVVAM LSGDVEVSDV TSKPGYLTDW RFDDTTASSI SGFPLRNTQA
1001: SESFTSFVAP RSEISPRNND ARPMLGAQMN EGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.