Factsheet for VIT_00s0125g00140.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0125g00210.t01	Wine grape	cytosol	61.12	71.36
VIT_10s0092g00470.t01	Wine grape	cytosol	66.71	46.88
VIT_10s0092g00710.t01	Wine grape	plasma membrane	67.29	46.76
VIT_00s0125g00090.t01	Wine grape	plasma membrane	66.71	46.5
VIT_10s0092g00590.t01	Wine grape	plasma membrane	65.85	43.8
VIT_19s0014g00750.t01	Wine grape	plasma membrane	29.27	42.86
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	27.12	40.13
VIT_12s0055g00580.t01	Wine grape	plasma membrane	56.96	38.51
VIT_19s0014g00530.t01	Wine grape	plasma membrane	26.83	37.93
VIT_10s0003g01860.t01	Wine grape	plastid, vacuole	33.86	34.35
VIT_10s0003g02000.t01	Wine grape	plasma membrane	35.15	33.84
VIT_19s0014g00790.t01	Wine grape	cytosol, nucleus, plasma membrane	39.6	31.36
VIT_19s0014g00520.t01	Wine grape	plasma membrane	41.32	28.49
VIT_19s0014g00470.t01	Wine grape	plasma membrane	41.03	28.4
VIT_10s0003g01920.t01	Wine grape	plasma membrane	38.16	28.06
VIT_19s0014g00500.t01	Wine grape	plasma membrane	41.03	27.93
VIT_19s0014g00680.t01	Wine grape	plasma membrane	40.89	27.91
VIT_10s0003g01990.t01	Wine grape	plasma membrane	36.44	27.67
VIT_10s0003g01940.t01	Wine grape	plasma membrane, plastid, vacuole	30.99	27.59
VIT_19s0014g00810.t01	Wine grape	plasma membrane, plastid	39.45	26.96
VIT_12s0028g01350.t01	Wine grape	plasma membrane	39.02	26.9
VIT_10s0003g01880.t01	Wine grape	cytosol	36.73	26.61
VIT_10s0003g01980.t01	Wine grape	cytosol	36.73	25.25
VIT_12s0055g00590.t01	Wine grape	plasma membrane	56.38	18.67
VIT_19s0014g00830.t01	Wine grape	plasma membrane	40.17	17.09
VIT_10s0003g01900.t01	Wine grape	plasma membrane	35.58	16.41

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	ProteinID:CCB46494	ProteinID:CCB46494.1
UniProt:F6H2Q2	EMBL:FN595230	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
InterPro:Malectin	PFAM:PF00069	PFAM:PF11721	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00021086F0	ArrayExpress:VIT_00s0125g00140	EnsemblPlantsGene:VIT_00s0125g00140	EnsemblPlants:VIT_00s0125g00140.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:1429686..1437482

Molecular Weight (calculated)

77016.3 Da

IEP (calculated)

7.454

GRAVY (calculated)

-0.080

Length

697 amino acids

Sequence
(BLAST)

001: MSRLGFVVAA SPCHIQATDH GIVPLCHYWE GSLHHACAIV VTGCTPPYVV EPMNLVANNF TFDSSNSSIL EGLNCLQRDF PCNKGTPQYT NFSVKCGGPE
101: LRTSDGTVFE ADNSITIGTT SALYFVSRME RWAVSNVGLY NDRSEYNTSS VEKALSQVKG TKNPKLFETS RISPGSLRYY GLGLVNGPYT VSLLFAETTF
201: KDPSTQTWQS RGRRVFDIYI QARTIFNTIN CNLLELSTDA KRKISLEKKF KATVSENYLE IHLFWAGKGT CCIPVQGYYG PSISALTVVP DLTRIPPKKH
301: KTGLIIGFAA AAGIVSFMLV LAACYMKRKG LHANEDIELL EIGPKLNTFS DAELRTATED FSPANKLGQG GFGTVYKGTL LDGRAVAVKQ LSIASYQAKS
401: QFITEIATIS AVQHRNLVKL YGFCIKGSRR LLVYEYLENK SLDHVLFGKC GLVLDWPTRF GICLGTARGL AYLHEESNPR IIHRDVKSSN ILLDAELCPK
501: ISDFGLAKLY DDKKTHISTQ IAGTIGYLAP EYAMLGHLTE KADVFSFGVV ALEILSGRPN TDKSLDAKKI YLLEWAWTLH ENNQSLDLVD PMLTALDENE
601: VSRVVRVALL CTQGSPMLRP TMSRVVAMLS GDIEVSTVTS KPSYLTDCDF KDKTSTFLSE DTQTSVASTS SPIDWDFKEI DRSFCSQDKY LLHLPVT

Best Arabidopsis Sequence Match ( AT1G56130.1 )
(BLAST)

001: MQWMTFGINA LSGPVPKEIG LLTDLRLLGI SSNNFSGSIP DEIGRCTKLQ QMYIDSSGLS GRIPLSFANL VQLEQAWIAD LEVTDQIPDF IGDWTKLTTL
101: RIIGTGLSGP IPSSFSNLTS LTELRLGDIS SGSSSLDFIK DMKSLSVLVL RNNNLTGTIP STIGEHSSLR QVDLSFNKLH GPIPASLFNL SQLTHLFLGN
201: NTLNGSFPTQ KTQSLRNVDV SYNDLSGSLP SWVSLPSLKL NLVANNFTLE GLDNRVLPGL NCLQKNFPCN RGKGIYSDFS INCGGPEKRS VTGALFERED
301: EDFGPASFFV SAGQRWAASS VGLFAGSSNN IYIATSQSQF VNTLDSELFQ SARLSASSVR YYGLGLENGG YTVTLQFAEI QILGSTSTTW KGLGRRRFDI
401: YVQGRLVEKD FDVRRTAGDS TVRAVQRVYK ANVSENHLEV HLFWAGKGTC CIPIQGAYGP LISAVSATPD FTPTVANKPP SKGKNRTGTI VGVIVGVGLL
501: SILAGVVMFT IRKRRKRYTD DEELLGMDVK PYIFTYSELK SATQDFDPSN KLGEGGFGPV YKGNLNDGRV VAVKLLSVGS RQGKGQFVAE IVAISSVLHR
601: NLVKLYGCCF EGEHRMLVYE YLPNGSLDQA LFGDKTLHLD WSTRYEICLG VARGLVYLHE EASVRIVHRD VKASNILLDS RLVPQISDFG LAKLYDDKKT
701: HISTRVAGTI GYLAPEYAMR GHLTEKTDVY AFGVVALELV SGRPNSDENL EEEKKYLLEW AWNLHEKSRD IELIDDKLTD FNMEEAKRMI GIALLCTQTS
801: HALRPPMSRV VAMLSGDVEI GDVTSKPGYV SDWRFDDTTG SSLSGFQIKD TTGYSMSLVA PGSEISPRDS DFKPMLGSKI NEGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.