Factsheet for VIT_19s0014g00830.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034331	Potato	plasma membrane	22.47	75.88
VIT_19s0014g00750.t01	Wine grape	plasma membrane	21.92	75.42
PGSC0003DMT400039817	Potato	plastid	28.51	74.48
VIT_19s0014g00680.t01	Wine grape	plasma membrane	44.69	71.69
PGSC0003DMT400035698	Potato	cytosol, endoplasmic reticulum, plasma membrane	21.12	71.19
VIT_19s0014g00790.t01	Wine grape	cytosol, nucleus, plasma membrane	37.97	70.68
KRH55049	Soybean	endoplasmic reticulum	42.92	69.47
KRH26159	Soybean	plasma membrane	42.73	69.24
PGSC0003DMT400073675	Potato	plasma membrane	38.03	67.42
KRH27378	Soybean	plasma membrane	40.96	66.63
KRH21908	Soybean	plasma membrane	41.58	66.57
KRH27392	Soybean	plasma membrane	40.78	66.4
VIT_19s0014g00810.t01	Wine grape	plasma membrane, plastid	41.21	66.18
Solyc12g014350.1.1	Tomato	endoplasmic reticulum, extracellular	40.84	65.72
AT1G53430.1	Thale cress	plasma membrane	39.99	63.1
AT1G53440.1	Thale cress	plasma membrane	39.38	62.32
Bra038124.1-P	Field mustard	plasma membrane	37.91	60.94
CDY60204	Canola	plasma membrane	38.83	60.92
CDY25853	Canola	plasma membrane	38.58	60.54
GSMUA_Achr6P25940_001	Banana	plasma membrane	35.71	59.94
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	16.12	56.05
VIT_19s0014g00530.t01	Wine grape	plasma membrane	16.79	55.78
GSMUA_Achr1P04980_001	Banana	plasma membrane	34.25	55.77
VIT_19s0014g00470.t01	Wine grape	plasma membrane	34.13	55.51
VIT_12s0028g01350.t01	Wine grape	plasma membrane	33.82	54.8
VIT_19s0014g00520.t01	Wine grape	plasma membrane	33.58	54.4
VIT_19s0014g00500.t01	Wine grape	plasma membrane	33.94	54.3
VIT_10s0003g02000.t01	Wine grape	plasma membrane	23.93	54.14
KXG29872	Sorghum	plasma membrane	32.72	52.04
Zm00001d016242_P002	Maize	plasma membrane	27.78	51.7
VIT_10s0003g01920.t01	Wine grape	plasma membrane	29.18	50.42
VIT_10s0003g01990.t01	Wine grape	plasma membrane	27.72	49.46
VIT_10s0003g01940.t01	Wine grape	plasma membrane, plastid, vacuole	23.38	48.91
VIT_10s0003g01880.t01	Wine grape	cytosol	28.63	48.75
VIT_00s0125g00210.t01	Wine grape	cytosol	17.64	48.41
VIT_10s0003g01860.t01	Wine grape	plastid, vacuole	19.9	47.45
Os02t0232500-01	Rice	extracellular, plasma membrane	20.33	46.31
VIT_10s0003g01980.t01	Wine grape	cytosol	27.96	45.17
VIT_10s0092g00470.t01	Wine grape	cytosol	26.74	44.15
VIT_12s0055g00580.t01	Wine grape	plasma membrane	26.5	42.1
VIT_00s0125g00090.t01	Wine grape	plasma membrane	25.58	41.9
VIT_10s0092g00710.t01	Wine grape	plasma membrane	25.46	41.58
VIT_10s0092g00590.t01	Wine grape	plasma membrane	26.31	41.13
VIT_00s0125g00140.t01	Wine grape	cytosol	17.09	40.17
VIT_10s0003g01900.t01	Wine grape	plasma membrane	29.98	32.49
VIT_12s0055g00590.t01	Wine grape	plasma membrane	27.78	21.62

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ProteinID:CCB46217
ProteinID:CCB46217.1	ncoils:Coil	UniProt:F6H1V3	EMBL:FN595229	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Malectin	PFAM:PF07714	PFAM:PF11721	PFAM:PF13855
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27006	PANTHER:PTHR27006:SF101	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002108CBD
ArrayExpress:VIT_19s0014g00830	EnsemblPlantsGene:VIT_19s0014g00830	EnsemblPlants:VIT_19s0014g00830.t01	unigene:Vvi.25653	SEG:seg	:

Description

No Description!

Coordinates

chr19:+:831667..864227

Molecular Weight (calculated)

180670.0 Da

IEP (calculated)

5.426

GRAVY (calculated)

-0.215

Length

1638 amino acids

Sequence
(BLAST)

0001: MRYLQGTSMD GPIPSTISQL KNLIELVMRN CSITDYSLYI NCGGEETTFK GKTYEKDNNV EGASQFFTDG IDKWAYSSTG AFIGNQGGSH LAKNTSALNS
0101: EDAEMYQTAR LAPISLKYYG LCLRKGPYKV RLQFAEIMFF SNQTFGSLGR RLFHVSIQGN VVLKDFNIME EAKGAGKGIY RDFDASVDGS TLEIHLYWTG
0201: KGTNSIPDEG VYGPLISAIA VTPKFNPNPG LSVGDIIGIV IPSCVVLVLI LVLLRMKGYL GGKDLEDREL RELGMQTGYF SLRQIKAATN NFDSANKIGE
0301: GGFGPVYKGV LSDGSVIAVK QLSSKSKQGN REFVNEIGMI SALQHPNLVK LYGCCIEGNQ LLLIYEYLEN NCLARALFGS EEQRLNLDWP TRKKICLGIA
0401: RGLAYLHEES RLKIVHRDIK ATNVLLDKNL NAKISDFGLA KLDEDENTHI STRIAGTIGY MAPEYAMRGY LTDKADVYSF GIVALEIVSG KSNTNYRPKE
0501: EFVYLLDWAY VLHEQGNLLE LVDPSLGSNY SEEEVMRMLN LALLSTNQSP TLRPSMSSVV SMLDGKIAVQ APTIKHDSMN PDMRFKAFEK LSLDSQSHVS
0601: AFSVDSQDQG SISVDGPWVD SSISLHSREE TRGFPSSSKR TPTSAQNSWN KAQLLPEDEV QTLETIATRL NNRYWNISQT SCGGGFNVNF TSDYFSNVTC
0701: DCTFENSTVC HVTNIQLKGL NLTGIMPDEF GNLTYLQEID LTRNYLNGSI PTSLAQIPLV TLSALGNRLS GSIPKEIGDI ATLEELVLED NQLEGSLPEN
0801: LGNLSSLSRL LLTANNFTGT IPETFGNLKN LTDVRLDGNA FSGKIPDFIG NWTQLDRLDM QGTSMDGPIP STISLLTNLT QLRIADLNGS SMAFPNLQNL
0901: TKMEELVLRN CSITDSIPDY IGKMASLKTL DLSFNRLSGQ VSDTWSLSQL EYLFLTNNSL SGTLPSWISD SNQKFDVSYN NFTGPSSLTV CQQRAVNLVS
1001: SFSSSDSNSV LWCLKKGLPC PGNAKHYSLF INCGGSEINY EGNDYERDLD GSGASHFSDY SEKWGYSSTG VFTNNDDAAY VATNTFSLNI TGPEYLQTAR
1101: TSPISLKYYG LCMRKGSYRV QLHFAEIMFS DDETFSSLGK RIFDVSIQGV TVLKDFNIVE EAKGVGKAIT KDFETSVNGS TLEIHLYWAG KGTNAIPSRG
1201: VYGPLISAIT VTPNFDVSTG LSAGAIAGIV IASIAAVVLI LIVLRLTGYL GGKDQEDKEL QALKLQTGYF SLRQIKAATN NFDPANKIGE GGFGPVYKGV
1301: LPDGSVIAVK QLSSKSKQGN REFVNEIGMI SALQHPNLVK LYGWCIEGNQ LLLIYEYLEN NCLARALFGR IEQRLNLDWP TRNKICLGIA RGLAYLHEES
1401: RLKIVHRDIK ATNVLLDKDL NAKISDFGLA KLDEEENTHI STRIAGTIGY MAPEYAMRGY LTDKADVYSF GIVALEIVSG KSNTNYRPKE EFVYLLDWAY
1501: VLQEQENLLE LVDPSLGSKY SKEEAQRMLN LALLCANPSP TLRPSMSSVV SMLEGKTAVQ VPLIKRSSMN SMNLDMRFKA FEKLSQDSQT YVSERSQGSQ
1601: MQRSMSMDGP WFGSSVSFPD KDKTREHSSS SKQKLLHD

Best Arabidopsis Sequence Match ( AT1G53440.1 )
(BLAST)

0001: MGFFFSTRKG LLLIIFICLD IFGSNAQLLP EDEVQTLRTI FRKLQNQTVN IERTSCLDRK WNFVAESTSK LPTSNITCDC TFNASSVCRV TNIQLRGFNL
0101: RGIIPPEFGN LTRLTEIDLV LNFLSGTIPT TLSQIPLEIL AVTGNRLSGP FPPQLGQITT LTDVIMESNL FTGQLPPNLG NLRSLKRLLI SSNNITGRIP
0201: ESLSNLKNLT NFRIDGNSLS GKIPDFIGNW TRLVRLDLQG TSMEGPIPAS ISNLKNLTEL RITDLRGPTS PFPDLQNMTN MERLVLRNCL IREPIPEYIG
0301: TSMTMLKLLD LSSNMLNGTI PDTFRSLNAF NFMYLNNNSL TGPVPQFILD SKQNIDLSYN NFTQPPTLSC NQLDVNLISS YPSVTNNSVQ WCLRKDLPCP
0401: GDAHHSSLFI NCGGNRLKVD KDEYADDLNK RGASTFSSVS ERWGYSSSGA WLGNDGATYL ATDTFNLINE STPEYYKTAR LASQSLKYYG LCMRRGSYKV
0501: QLYFAEIMFS NDQTYSSLGR RLFDIYVQGI LLERDFNIAQ RAGGVGKPFL RQVDEVQVNG STLEIHLKWT GKGTNVIPTR GVYGPLISAI TVTPNFKVDT
0601: GKPLSNGVVA GIVIAACVAF GLLVLVILRL TGYLGGKEVD ENEELRGLDL QTGSFTLKQI KRATNNFDPE NKIGEGGFGP VYKGVLADGM TIAVKQLSSK
0701: SKQGNREFVT EIGMISALQH PNLVKLYGCC IEGKELLLVY EYLENNSLAR ALFGTEKQRL HLDWSTRNKV CIGIAKGLAY LHEESRLKIV HRDIKATNVL
0801: LDLSLNAKIS DFGLAKLDEE ENTHISTRIA GTIGYMAPEY AMRGYLTDKA DVYSFGVVCL EIVSGKSNTN YRPKEEFIYL LDWAYVLQEQ GSLLELVDPD
0901: LGTSFSKKEA MRMLNIALLC TNPSPTLRPP MSSVVSMLQG KIKVQPPLVK READPSGSAA MRFKALEHLS QDSESQVSTY TRNKEHKSSS SMDGPWVDSS
1001: FSDPSKDVSL LQQEEGNSSS SSRRLLDDLT DVEIE

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Source:UniProtKB/Swiss-Prot;Acc:C0LGG9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.