Factsheet for VIT_00s0125g00210.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0125g00140.t01	Wine grape	cytosol	71.36	61.12
VIT_10s0092g00710.t01	Wine grape	plasma membrane	81.07	48.26
VIT_00s0125g00090.t01	Wine grape	plasma membrane	79.9	47.7
VIT_10s0092g00470.t01	Wine grape	cytosol	76.55	46.07
VIT_19s0014g00750.t01	Wine grape	plasma membrane	35.34	44.33
VIT_10s0003g02020.t01	Wine grape	mitochondrion, plasma membrane, plastid	34.67	43.95
VIT_10s0092g00590.t01	Wine grape	plasma membrane	74.87	42.65
VIT_19s0014g00530.t01	Wine grape	plasma membrane	34.34	41.58
VIT_12s0055g00580.t01	Wine grape	plasma membrane	63.99	37.05
VIT_10s0003g02000.t01	Wine grape	plasma membrane	44.89	37.02
VIT_10s0003g01860.t01	Wine grape	plastid, vacuole	42.55	36.97
VIT_19s0014g00790.t01	Wine grape	cytosol, nucleus, plasma membrane	46.9	31.82
VIT_10s0003g01990.t01	Wine grape	plasma membrane	45.23	29.41
VIT_19s0014g00470.t01	Wine grape	plasma membrane	48.74	28.9
VIT_19s0014g00520.t01	Wine grape	plasma membrane	48.74	28.78
VIT_10s0003g01920.t01	Wine grape	plasma membrane	45.39	28.59
VIT_10s0003g01940.t01	Wine grape	plasma membrane, plastid, vacuole	37.35	28.48
VIT_19s0014g00500.t01	Wine grape	plasma membrane	48.58	28.32
VIT_19s0014g00680.t01	Wine grape	plasma membrane	47.57	27.82
VIT_12s0028g01350.t01	Wine grape	plasma membrane	47.07	27.79
VIT_19s0014g00810.t01	Wine grape	plasma membrane, plastid	46.73	27.35
VIT_10s0003g01880.t01	Wine grape	cytosol	43.72	27.13
VIT_10s0003g01980.t01	Wine grape	cytosol	44.72	26.33
VIT_12s0055g00590.t01	Wine grape	plasma membrane	62.98	17.86
VIT_19s0014g00830.t01	Wine grape	plasma membrane	48.41	17.64
VIT_10s0003g01900.t01	Wine grape	plasma membrane	43.72	17.27

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.2	Gene3D:2.60.120.430	Gene3D:3.30.200.20	ProteinID:CCB46500	ProteinID:CCB46500.1
UniProt:F6H2Q8	EMBL:FN595230	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
InterPro:Malectin	PFAM:PF07714	PFAM:PF11721	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27006	PANTHER:PTHR27006:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00021089CC	ArrayExpress:VIT_00s0125g00210	EnsemblPlantsGene:VIT_00s0125g00210
EnsemblPlants:VIT_00s0125g00210.t01	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:1735246..1739949

Molecular Weight (calculated)

65093.6 Da

IEP (calculated)

6.004

GRAVY (calculated)

-0.081

Length

597 amino acids

Sequence
(BLAST)

001: MLSCTHVTDT SFAIKCGGSE VTTSDGTVYE ADNSISGTAP TSFYVSRTEK WGVSNVGLFV DKIANTSLVT GTNTPELFKT SRISPGSLRY YGMGLENGPY
101: IVSLQFAEMI LKDPSTKTWE STGRRVFDIY IQGILQLGDF DISKEAGGVQ KAIEKKFNAT VSENYLEIHL FWAGKGTCCI PYDGYYGPSI SALSVVSASE
201: RTIPPEKGKT GLIAGIAIAA GILSLIVISA VFYIKRKGSD MNEDIELPEI GPRPSTFSYA ELRTATENFN AINKLGEGGF GAVYKGTLSD GRVVAVKQLS
301: LASQHGKSQF IAEIATISAV QHRNLVKLYG FCIKGNKRLL VYEYLENKSL DHSLFGKNDL HLDWPTRFSI GLATARGLAY LHEESRPRII HRDVKASNIL
401: LDAELCPKIS DFGLAKLYDD KKTHISTRVA GTIGYLAPEY AMRGHLTEKA DVFGFGVVAL EIVSGRPNYD NSLEAEKMYL LEWAWTLHEN NRSLDLVDPK
501: LTTFDENEAA RVIGVALLCI QASPALRPTM SRVVAMLAGD IEVSTVASKP GYLTDWDFKD ITTSFLSDDT QTSVASTSTS YPAPTPVNLS EPMLSAP

Best Arabidopsis Sequence Match ( AT1G56130.1 )
(BLAST)

001: MQWMTFGINA LSGPVPKEIG LLTDLRLLGI SSNNFSGSIP DEIGRCTKLQ QMYIDSSGLS GRIPLSFANL VQLEQAWIAD LEVTDQIPDF IGDWTKLTTL
101: RIIGTGLSGP IPSSFSNLTS LTELRLGDIS SGSSSLDFIK DMKSLSVLVL RNNNLTGTIP STIGEHSSLR QVDLSFNKLH GPIPASLFNL SQLTHLFLGN
201: NTLNGSFPTQ KTQSLRNVDV SYNDLSGSLP SWVSLPSLKL NLVANNFTLE GLDNRVLPGL NCLQKNFPCN RGKGIYSDFS INCGGPEKRS VTGALFERED
301: EDFGPASFFV SAGQRWAASS VGLFAGSSNN IYIATSQSQF VNTLDSELFQ SARLSASSVR YYGLGLENGG YTVTLQFAEI QILGSTSTTW KGLGRRRFDI
401: YVQGRLVEKD FDVRRTAGDS TVRAVQRVYK ANVSENHLEV HLFWAGKGTC CIPIQGAYGP LISAVSATPD FTPTVANKPP SKGKNRTGTI VGVIVGVGLL
501: SILAGVVMFT IRKRRKRYTD DEELLGMDVK PYIFTYSELK SATQDFDPSN KLGEGGFGPV YKGNLNDGRV VAVKLLSVGS RQGKGQFVAE IVAISSVLHR
601: NLVKLYGCCF EGEHRMLVYE YLPNGSLDQA LFGDKTLHLD WSTRYEICLG VARGLVYLHE EASVRIVHRD VKASNILLDS RLVPQISDFG LAKLYDDKKT
701: HISTRVAGTI GYLAPEYAMR GHLTEKTDVY AFGVVALELV SGRPNSDENL EEEKKYLLEW AWNLHEKSRD IELIDDKLTD FNMEEAKRMI GIALLCTQTS
801: HALRPPMSRV VAMLSGDVEI GDVTSKPGYV SDWRFDDTTG SSLSGFQIKD TTGYSMSLVA PGSEISPRDS DFKPMLGSKI NEGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.