Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g02020.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 40.47 | 62.21 |
| VIT_10s0003g01940.t01 | Wine grape | plasma membrane, plastid, vacuole | 57.6 | 53.26 |
| VIT_19s0014g00530.t01 | Wine grape | plasma membrane | 36.19 | 53.14 |
| VIT_19s0014g00750.t01 | Wine grape | plasma membrane | 34.67 | 52.73 |
| GSMUA_Achr6P25980_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 41.99 | 51.88 |
| VIT_10s0003g01860.t01 | Wine grape | plastid, vacuole | 49.03 | 51.67 |
| VIT_10s0003g01980.t01 | Wine grape | cytosol | 68.78 | 49.11 |
| VIT_10s0003g01920.t01 | Wine grape | plasma membrane | 63.95 | 48.84 |
| VIT_10s0003g01990.t01 | Wine grape | plasma membrane | 60.77 | 47.93 |
| VIT_00s0125g00210.t01 | Wine grape | cytosol | 37.02 | 44.89 |
| Solyc02g071820.2.1 | Tomato | nucleus, plasma membrane | 57.87 | 42.37 |
| VIT_19s0014g00470.t01 | Wine grape | plasma membrane | 58.84 | 42.3 |
| Solyc02g071810.2.1 | Tomato | endoplasmic reticulum | 58.98 | 42.28 |
| VIT_19s0014g00520.t01 | Wine grape | plasma membrane | 58.56 | 41.94 |
| VIT_19s0014g00790.t01 | Wine grape | cytosol, nucleus, plasma membrane | 50.83 | 41.82 |
| Solyc02g071860.2.1 | Tomato | extracellular | 57.18 | 41.61 |
| VIT_19s0014g00500.t01 | Wine grape | plasma membrane | 58.56 | 41.41 |
| VIT_12s0028g01350.t01 | Wine grape | plasma membrane | 57.46 | 41.15 |
| VIT_10s0003g01880.t01 | Wine grape | cytosol | 53.87 | 40.54 |
| VIT_19s0014g00680.t01 | Wine grape | plasma membrane | 53.87 | 38.2 |
| VIT_19s0014g00810.t01 | Wine grape | plasma membrane, plastid | 49.86 | 35.39 |
| VIT_00s0125g00140.t01 | Wine grape | cytosol | 33.84 | 35.15 |
| VIT_10s0092g00470.t01 | Wine grape | cytosol | 43.65 | 31.85 |
| VIT_10s0003g01900.t01 | Wine grape | plasma membrane | 65.19 | 31.24 |
| VIT_10s0092g00590.t01 | Wine grape | plasma membrane | 43.78 | 30.25 |
| VIT_10s0092g00710.t01 | Wine grape | plasma membrane | 41.71 | 30.11 |
| VIT_12s0055g00580.t01 | Wine grape | plasma membrane | 42.68 | 29.97 |
| VIT_00s0125g00090.t01 | Wine grape | plasma membrane | 40.75 | 29.5 |
| VIT_19s0014g00830.t01 | Wine grape | plasma membrane | 54.14 | 23.93 |
| VIT_12s0055g00590.t01 | Wine grape | plasma membrane | 42.96 | 14.77 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.8.2 | Gene3D:2.60.120.430 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | ProteinID:CCB55728 |
| ProteinID:CCB55728.1 | UniProt:F6HMD9 | EMBL:FN595992 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR032675 |
| InterPro:Kinase-like_dom_sf | InterPro:LRR_dom_sf | InterPro:Malectin | PFAM:PF00069 | PFAM:PF11721 | ScanProsite:PS00108 |
| PFscan:PS50011 | PANTHER:PTHR27006 | PANTHER:PTHR27006:SF54 | InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF52058 |
| SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0002108526 | ArrayExpress:VIT_10s0003g02000 | EnsemblPlantsGene:VIT_10s0003g02000 | EnsemblPlants:VIT_10s0003g02000.t01 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:3605347..3616039
Molecular Weight (calculated)
79791.2 Da
IEP (calculated)
6.703
GRAVY (calculated)
-0.207
Length
724 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSGTVPPEL GKLVNLENLI LSSNNLTGVL PADLANLTNL IEFRISSNNF AGKIPHFIQS WKRLQKLEIQ ASGFEGPIPS DISVLNNLSE LQIDLSYNNF
101: SEQSAPSYHY SLHINCGGEE TRSGNIVYEE DKDEGGPAKF QPKKDNWGFS SSGHFWDGDK IASDYIATNV SILKMNYSEL YTTARLSPLS LTYYGRCLAD
201: GKYSVKLHFA EIIMRDNESF HSLGRRIFDV YIQDKLELKD FDIAQAASGV DKVVVKEFKT SVKNKTLEIR FHWAGKGTTA VPTRATYGPL ISAISVESDF
301: PIPSEGKRKK ILIGSLALAL VLILIISGIA CWKCYFGGKS STEQDLRRLD LQTGLFTLRQ IKAATNNFNA ANKIGEGGFG PVYKGQLSNG TLIAVKQLSS
401: KSRQGNREFV NEIGIISGLQ HPNLVKLYGC CIERTQLLLV YEYMENNSLA RALFGAETSV PILDWATRQK ICIGLARGLA FLHEESTLKI VHRDIKAANV
501: LLDGDLKAKI SDFGLAKLNE EENTHISTRI AGTRGYMAPE YALWGHLTDK ADIYSFGVVA LEIVSGKNNS SRKPENECVC LLDRAFALQQ KGSLMEIVDP
601: KLGSEFNRDE AERMIKVAIL CTNASPTLRP IMSAVVSMLE GQTIVPEVIS DASMDEDYLN FKSLGDYHKR MQKQILSGSE ASKFSSDGTI ATGSSSTSAQ
701: DLYKNNPDSI NFSDSSSLLS PQNS
101: SEQSAPSYHY SLHINCGGEE TRSGNIVYEE DKDEGGPAKF QPKKDNWGFS SSGHFWDGDK IASDYIATNV SILKMNYSEL YTTARLSPLS LTYYGRCLAD
201: GKYSVKLHFA EIIMRDNESF HSLGRRIFDV YIQDKLELKD FDIAQAASGV DKVVVKEFKT SVKNKTLEIR FHWAGKGTTA VPTRATYGPL ISAISVESDF
301: PIPSEGKRKK ILIGSLALAL VLILIISGIA CWKCYFGGKS STEQDLRRLD LQTGLFTLRQ IKAATNNFNA ANKIGEGGFG PVYKGQLSNG TLIAVKQLSS
401: KSRQGNREFV NEIGIISGLQ HPNLVKLYGC CIERTQLLLV YEYMENNSLA RALFGAETSV PILDWATRQK ICIGLARGLA FLHEESTLKI VHRDIKAANV
501: LLDGDLKAKI SDFGLAKLNE EENTHISTRI AGTRGYMAPE YALWGHLTDK ADIYSFGVVA LEIVSGKNNS SRKPENECVC LLDRAFALQQ KGSLMEIVDP
601: KLGSEFNRDE AERMIKVAIL CTNASPTLRP IMSAVVSMLE GQTIVPEVIS DASMDEDYLN FKSLGDYHKR MQKQILSGSE ASKFSSDGTI ATGSSSTSAQ
701: DLYKNNPDSI NFSDSSSLLS PQNS
0001: MIYLHRIYFI IVLFTLIFHG RLGFSDNNKL HEAEVRALKE IGKKLGKKDW DFNKDPCSGE GTWIVTTYTT KGFESNITCD CSFLPQNSSC HVIRIALKSQ
0101: NLTGIVPPEF SKLRHLKVLD LSRNSLTGSI PKEWASMRLE DLSFMGNRLS GPFPKVLTRL TMLRNLSLEG NQFSGPIPPD IGQLVHLEKL HLPSNAFTGP
0201: LTEKLGLLKN LTDMRISDNN FTGPIPDFIS NWTRILKLQM HGCGLDGPIP SSISSLTSLT DLRISDLGGK PSSFPPLKNL ESIKTLILRK CKIIGPIPKY
0301: IGDLKKLKTL DLSFNLLSGE IPSSFENMKK ADFIYLTGNK LTGGVPNYFV ERNKNVDVSF NNFTDESSIP SHDCNRVTSN LVESFALGNK SHKGSTCFLQ
0401: RMPCVHPKRY HLYKLYINCG GGEVKVDKEI TYQADDEPKG ASMYVLGANK RWALSSTGNF MDNDDDADEY TVQNTSRLSV NASSPSFGLY RTARVSPLSL
0501: TYYGICLGNG NYTVNLHFAE IIFTDDNTLY SLGKRLFDIY VQDQLVIKNF NIQEAARGSG KPIIKSFLVN VTDHTLKIGL RWAGKGTTGI PIRGVYGPMI
0601: SAISVEPNFK PPVYYDTKDI ILKVGVPVAA ATLLLFIIVG VFWKKRRDKN DIDKELRGLD LQTGTFTLRQ IKAATDNFDV TRKIGEGGFG SVYKGELSEG
0701: KLIAVKQLSA KSRQGNREFV NEIGMISALQ HPNLVKLYGC CVEGNQLILV YEYLENNCLS RALFGKDESS RLKLDWSTRK KIFLGIAKGL TFLHEESRIK
0801: IVHRDIKASN VLLDKDLNAK ISDFGLAKLN DDGNTHISTR IAGTIGYMAP EYAMRGYLTE KADVYSFGVV ALEIVSGKSN TNFRPTEDFV YLLDWAYVLQ
0901: ERGSLLELVD PTLASDYSEE EAMLMLNVAL MCTNASPTLR PTMSQVVSLI EGKTAMQELL SDPSFSTVNP KLKALRNHFW QNELSRSLSF STSGPRTASA
1001: NSLVDAEEKT GLLD
0101: NLTGIVPPEF SKLRHLKVLD LSRNSLTGSI PKEWASMRLE DLSFMGNRLS GPFPKVLTRL TMLRNLSLEG NQFSGPIPPD IGQLVHLEKL HLPSNAFTGP
0201: LTEKLGLLKN LTDMRISDNN FTGPIPDFIS NWTRILKLQM HGCGLDGPIP SSISSLTSLT DLRISDLGGK PSSFPPLKNL ESIKTLILRK CKIIGPIPKY
0301: IGDLKKLKTL DLSFNLLSGE IPSSFENMKK ADFIYLTGNK LTGGVPNYFV ERNKNVDVSF NNFTDESSIP SHDCNRVTSN LVESFALGNK SHKGSTCFLQ
0401: RMPCVHPKRY HLYKLYINCG GGEVKVDKEI TYQADDEPKG ASMYVLGANK RWALSSTGNF MDNDDDADEY TVQNTSRLSV NASSPSFGLY RTARVSPLSL
0501: TYYGICLGNG NYTVNLHFAE IIFTDDNTLY SLGKRLFDIY VQDQLVIKNF NIQEAARGSG KPIIKSFLVN VTDHTLKIGL RWAGKGTTGI PIRGVYGPMI
0601: SAISVEPNFK PPVYYDTKDI ILKVGVPVAA ATLLLFIIVG VFWKKRRDKN DIDKELRGLD LQTGTFTLRQ IKAATDNFDV TRKIGEGGFG SVYKGELSEG
0701: KLIAVKQLSA KSRQGNREFV NEIGMISALQ HPNLVKLYGC CVEGNQLILV YEYLENNCLS RALFGKDESS RLKLDWSTRK KIFLGIAKGL TFLHEESRIK
0801: IVHRDIKASN VLLDKDLNAK ISDFGLAKLN DDGNTHISTR IAGTIGYMAP EYAMRGYLTE KADVYSFGVV ALEIVSGKSN TNFRPTEDFV YLLDWAYVLQ
0901: ERGSLLELVD PTLASDYSEE EAMLMLNVAL MCTNASPTLR PTMSQVVSLI EGKTAMQELL SDPSFSTVNP KLKALRNHFW QNELSRSLSF STSGPRTASA
1001: NSLVDAEEKT GLLD
Arabidopsis Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.