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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 8
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
 plasma membrane: 18260611
plasma membrane: 18557835
extracellular: 24083427
extracellular: 26072143
plasma membrane: 27800704
msms PMID: 26072143 doi
B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 18557835 doi
SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis
Department of Biology Area 9, University of York, York YO10 5DD, UK.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os04t0616500-01 Rice plasma membrane 89.27 89.36
OQU82325 Sorghum plasma membrane 79.61 78.84
Zm00001d002312_P004 Maize cytosol 44.1 78.61
Zm00001d026306_P009 Maize plasma membrane 78.73 78.5
TraesCS4A01G449700.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 66.05 78.09
TraesCS2D01G415600.1 Wheat plasma membrane 76.29 76.97
TraesCS2D01G415700.1 Wheat plasma membrane 76.0 76.9
TraesCS2A01G418200.1 Wheat plasma membrane, vacuole 76.1 76.85
TraesCS2A01G418300.1 Wheat plasma membrane 75.51 76.41
TraesCS2B01G437200.1 Wheat plasma membrane 75.51 76.33
HORVU2Hr1G098390.1 Barley plasma membrane 75.61 76.2
TraesCS7D01G034800.1 Wheat plasma membrane 74.73 76.14
HORVU2Hr1G098450.3 Barley vacuole 76.1 76.1
TraesCS7A01G038600.1 Wheat plasma membrane 74.73 75.92
TraesCS2B01G437300.2 Wheat plasma membrane 75.51 75.81
Os04t0616400-02 Rice plasma membrane 48.2 75.3
Os04t0616700-03 Rice plasma membrane 74.54 74.76
HORVU7Hr1G006940.9 Barley cytosol 73.37 74.02
TraesCS4A01G450300.1 Wheat endoplasmic reticulum, extracellular, vacuole 39.02 72.86
Os04t0616200-01 Rice plasma membrane 23.02 71.95
Zm00001d026303_P004 Maize cytosol 67.71 68.99
Os08t0203600-05 Rice plasma membrane 42.63 65.81
Os08t0203700-01 Rice vacuole 64.59 64.71
HORVU2Hr1G098430.3 Barley plastid 32.2 63.83
Os08t0203400-01 Rice plasma membrane 63.12 63.18
Os05t0263100-00 Rice plasma membrane 61.56 61.44
Os05t0261700-02 Rice cytosol, plasma membrane 28.78 60.7
Os05t0258400-00 Rice plasma membrane 39.9 59.8
Os04t0616282-00 Rice extracellular 7.51 59.23
Os05t0256500-00 Rice plasma membrane 36.29 58.58
CDX81476 Canola cytosol 16.1 58.1
Solyc07g066550.2.1 Tomato plasma membrane 56.98 56.86
GSMUA_Achr7P16620_001 Banana cytosol, plasma membrane, plastid 35.12 56.78
VIT_12s0055g00580.t01 Wine grape plasma membrane 56.88 56.55
GSMUA_Achr2P17280_001 Banana plasma membrane 34.34 56.23
Os05t0256100-01 Rice plasma membrane 22.34 55.99
KRH44862 Soybean plasma membrane 55.32 54.84
KRH44860 Soybean plasma membrane 55.02 54.49
KRH37939 Soybean plasma membrane 54.44 54.39
Bra007909.1-P Field mustard plasma membrane 53.27 53.9
GSMUA_AchrUn_... Banana endoplasmic reticulum, plasma membrane 28.0 53.85
AT1G56140.1 Thale cress plasma membrane 54.24 53.82
Bra030815.1-P Field mustard plasma membrane 53.76 53.76
CDY10509 Canola plasma membrane 53.76 53.65
GSMUA_Achr8P07040_001 Banana plasma membrane 56.1 53.54
CDY42407 Canola plasma membrane 53.95 53.53
CDY10508 Canola plasma membrane 53.95 53.53
AT1G56130.2 Thale cress plasma membrane 53.46 53.1
Bra030813.1-P Field mustard plasma membrane 53.85 52.57
AT1G56120.1 Thale cress cytosol 53.66 52.53
Os08t0203201-00 Rice cytosol 6.15 52.5
Bra007908.1-P Field mustard cytosol 35.71 52.44
CDY38804 Canola golgi, plasma membrane 32.39 51.96
CDX67736 Canola plasma membrane 50.63 51.69
Bra003333.1-P Field mustard plasma membrane 50.63 51.69
CDY59119 Canola plasma membrane 50.44 51.49
CDY46490 Canola plasma membrane 50.83 51.28
CDY68250 Canola plasma membrane 50.83 51.28
Bra035966.1-P Field mustard plasma membrane 50.83 51.28
CDY47811 Canola plasma membrane 50.73 51.23
CDX98288 Canola plasma membrane 50.15 51.2
Bra007907.1-P Field mustard plasma membrane 51.22 51.12
GSMUA_Achr2P17300_001 Banana plasma membrane 34.34 51.09
Bra033670.1-P Field mustard plasma membrane 50.54 51.03
CDY11604 Canola plasma membrane 31.8 51.02
Bra016226.1-P Field mustard plasma membrane 27.41 50.91
CDY22357 Canola plasma membrane 50.34 50.84
AT1G56145.2 Thale cress plasma membrane 51.51 50.82
Bra033958.1-P Field mustard plasma membrane 48.39 50.56
CDY25239 Canola plasma membrane 45.46 50.43
CDY12693 Canola plasma membrane 47.51 48.55
Os08t0201700-00 Rice plasma membrane 7.71 45.66
Os08t0201500-01 Rice cytosol, extracellular, mitochondrion 4.0 35.04
Os02t0232500-01 Rice extracellular, plasma membrane 23.32 33.24
Os09t0345300-01 Rice plasma membrane 22.05 32.01
VIT_12s0055g00590.t01 Wine grape plasma membrane 56.39 27.46
CDY03757 Canola plasma membrane 53.46 26.82
CDY43003 Canola plasma membrane 53.37 26.07
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.2Gene3D:2.60.120.430Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:4336997
ProteinID:BAS91012.1ProteinID:CAD41882.2GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:MalectinEnsemblPlantsGene:Os04g0616300EnsemblPlants:Os04t0616300-01PFAM:PF00069
PFAM:PF11721ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27006PANTHER:PTHR27006:SF15
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q7XTP6SMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000021C780RefSeq:XP_015636432.1SEG:seg
Description
Similar to H0525G02.10 protein. (Os04t0616300-01)
Coordinates
chr4:-:31274513..31282357
Molecular Weight (calculated)
111609.0 Da
IEP (calculated)
7.439
GRAVY (calculated)
-0.132
Length
1025 amino acids
Sequence
(BLAST)
0001: MRVMSHLLLH GGVLLLLLAA AAVQAQRVAT KTDPTEAAAL NAVFAKLGQQ ASLSTATWNI SGDPCTGAAT DGTPIDDNPN FNPAIKCDCT FQNNTVCRIT
0101: KLKIYALDVP GTIPQELRNL TRLTHLNLGQ NTLTGPLPSF IGELTNMQNM TFRINSLSGP IPKELGNLTN LVSLGLGSNR FNGSLPSELG NLDKLQELYI
0201: DSAGLSGPLP SSFSKLTRMQ TLWASDNDFT GQIPDYIGNW NLTDLRFQGN SFQGPIPSAL SNLVQLSSLR IGDIENGSSS SLAFIGNMTS LSILILRNCK
0301: ISDNLASIDF SKFASLNLLD LSFNNITGQV PTALLGLNLL NSLFLGNNSL SGSLPSSKGP SLSTLDFSYN QLSGNFPPWA SGKNLQLNLV ANNFVIDSSN
0401: NSILPSGLAC LQRNTPCFLG SPQSSSFAVD CGSNRLISAS DNLRYQTDDA SLGPASYSVT GAPTWGVSNV GKFVDAPNGS YIIYSSRQFQ NTLDSELFQT
0501: SRMSPSSLRY YGIGLENGNY TVTLQFAEFG IEDTQTWKSL GRRVFDIYLQ GERQEKNFDI RKAAGDKSYT VVKKSYKVPV TKNFLEIHLF WAGKGTCCIP
0601: GQGYYGPTIS ALSVTPADFT PTVGIVAEQN KSTSKTGVIV GVVVGVAVLG LVALVGIFMW RQKRRKLTLE QQELYSIVGR PNVFSYSELR SATENFSSSN
0701: RLGEGGYGAV YKGKLNDGRV VAVKQLSQTS HQGKKQFATE IETISRVQHR NLVKLYGCCL EGNNPLLVYE YMENGSLDKA LFGIEKLNID WPARFDICLG
0801: IARGLAYLHE ESSIRVVHRD IKASNVLLDA NLNPKISDFG LAKLYDDKKT HVSTKVAGTF GYLAPEYAMR GHMTEKVDVF AFGVVLLETL AGRPNYDDTL
0901: EEDKIYIFEW AWELYENNNP LGIVDPNLRE FNRAEVLRAI HVALLCTQGS PHQRPPMSRV VSMLTGDTEV TDVLMKPSYI TEWQIKGGNT SFANSAVRGQ
1001: SSSAPGSTSQ QASSVFLNSI IQEGR
Best Arabidopsis Sequence Match ( AT1G56140.1 )
(BLAST)
0001: MLRLWRYLCL LLTVWFLCNF GPVYVVRAQN RTGATTHPDE ALALNSIFAA WRIRAPREWN ISGELCSGAA IDASVLDSNP AYNPLIKCDC SFENSTICRI
0101: TNIKVYAMEV VGSIPQQLWT LEYLTNLNLG QNVLTGSLPP ALGNLTRMRW MTFGINALSG PIPKEIGLLT DLRLLSISSN NFSGSIPDEI GRCTKLQQIY
0201: IDSSGLSGGL PVSFANLVEL EQAWIADMEL TGQIPDFIGD WTKLTTLRIL GTGLSGPIPA SFSNLTSLTE LRLGDISNGN SSLEFIKDMK SLSILVLRNN
0301: NLTGTIPSNI GEYSSLRQLD LSFNKLHGTI PASLFNLRQL THLFLGNNTL NGSLPTQKGQ SLSNVDVSYN DLSGSLPSWV SLPNLNLNLV ANNFTLEGLD
0401: NRVLSGLNCL QKNFPCNRGK GIYSDFSINC GGPEIRSVTE AVFEREDEDL GPASFVVSAG QRWAASSVGL FAGSSNNIYI STSQSQFVNT LDSELFQSAR
0501: LSASSLRYYG LGLENGGYTV TLQFAEIQIL GSTSNTWRGL GRRRFDIYVQ GRLVEKDFDV RRTAGDSTVR AVQREYKANV SQNHLEIHLF WAGKGTCCIP
0601: IQGAYGPLIS AVGATPDFTP TVGNRPPSKG KSMTGTIVGV IVGVGLLSII SGVVIFIIRK RRKRYTDDEE ILSMDVKPYT FTYSELKSAT QDFDPSNKLG
0701: EGGFGPVYKG KLNDGREVAV KLLSVGSRQG KGQFVAEIVA ISAVQHRNLV KLYGCCYEGE HRLLVYEYLP NGSLDQALFG EKTLHLDWST RYEICLGVAR
0801: GLVYLHEEAR LRIVHRDVKA SNILLDSKLV PKVSDFGLAK LYDDKKTHIS TRVAGTIGYL APEYAMRGHL TEKTDVYAFG VVALELVSGR PNSDENLEDE
0901: KRYLLEWAWN LHEKGREVEL IDHQLTEFNM EEGKRMIGIA LLCTQTSHAL RPPMSRVVAM LSGDVEVSDV TSKPGYLTDW RFDDTTASSI SGFPLRNTQA
1001: SESFTSFVAP RSEISPRNND ARPMLGAQMN EGR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Source:UniProtKB/Swiss-Prot;Acc:C0LGH3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.