Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 8
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030170.1-P | Field mustard | plasma membrane | 63.54 | 83.03 |
| CDX77648 | Canola | cytosol | 35.96 | 82.76 |
| Bra030174.1-P | Field mustard | plasma membrane | 78.92 | 82.64 |
| CDX98146 | Canola | plasma membrane | 82.52 | 82.6 |
| CDY43187 | Canola | plasma membrane | 81.72 | 81.64 |
| CDX98148 | Canola | plasma membrane | 82.62 | 81.32 |
| AT1G29740.1 | Thale cress | plasma membrane | 85.51 | 79.41 |
| CDY43185 | Canola | plasma membrane | 80.12 | 74.74 |
| Bra030169.1-P | Field mustard | plastid | 47.45 | 73.99 |
| AT1G29720.1 | Thale cress | plasma membrane | 56.14 | 55.15 |
| VIT_10s0003g02020.t01 | Wine grape | mitochondrion, plasma membrane, plastid | 25.47 | 54.14 |
| VIT_10s0003g01990.t01 | Wine grape | plasma membrane | 46.35 | 50.54 |
| GSMUA_Achr6P25980_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 28.47 | 48.63 |
| AT1G53420.1 | Thale cress | plasma membrane | 42.96 | 45.12 |
| AT1G07650.2 | Thale cress | plasma membrane | 44.95 | 44.12 |
| AT3G14840.2 | Thale cress | plasma membrane | 44.16 | 43.33 |
| AT1G29750.2 | Thale cress | plasma membrane | 43.76 | 42.9 |
| AT1G53430.1 | Thale cress | plasma membrane | 43.56 | 42.0 |
| AT1G53440.1 | Thale cress | plasma membrane | 43.06 | 41.64 |
| AT1G56140.1 | Thale cress | plasma membrane | 37.26 | 36.11 |
| AT1G56130.2 | Thale cress | plasma membrane | 36.26 | 35.17 |
| AT1G56120.1 | Thale cress | cytosol | 36.26 | 34.67 |
| AT1G56145.2 | Thale cress | plasma membrane | 34.97 | 33.69 |
| KRH75936 | Soybean | extracellular | 2.7 | 32.93 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.8.2 | Gene3D:2.60.120.430 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EntrezGene:839851 |
| UniProt:A0A1P8AUL5 | ProteinID:ANM60338.1 | ArrayExpress:AT1G29730 | EnsemblPlantsGene:AT1G29730 | RefSeq:AT1G29730 | TAIR:AT1G29730 |
| RefSeq:AT1G29730-TAIR-G | EnsemblPlants:AT1G29730.2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt_typical-subtyp | InterPro:Malectin | RefSeq:NP_001322634.1 | PFAM:PF00069 | PFAM:PF11721 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27006 | PANTHER:PTHR27006:SF55 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| SMART:SM00220 | SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI000848F1EE | SEG:seg | : | : | : |
Description
Leucine-rich repeat transmembrane protein kinase [Source:TAIR;Acc:AT1G29730]
Coordinates
chr1:-:10400564..10405913
Molecular Weight (calculated)
111293.0 Da
IEP (calculated)
7.462
GRAVY (calculated)
-0.115
Length
1001 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSAAYNLMIK SKSCLFSSSI LFVVTLIYLL CTVSASPSLH PDEVEALKDI TETLGVKHLN LSEDPCLTKT LVISQGVLKE GQNSTIRCDC HFNNYSTCHI
0101: KHFVLQKFNL PGRLPPMLYK FRHLESIDLY NNYLYGSIPM EWASLPYLKS ISVCANRLSG DIPKGLGKFI NLTLLVLEAN QFSGTIPKEL GNLVNLQGLG
0201: LSSNQLVGGL PKTLAKLTKL TNLHLSDNRL NGSIPEFIGK LPKLQRLELY ASGLRGPIPD SIFHLENLID VRISDTVAGL GHVPQITSTS LKYLVLRNIN
0301: LSGPIPTSIW DLPSLMTLDL SFNRLTGEIP AYATAPKYTY LAGNMLSGKV ETGAFLTAST NIDLSYNNFT WSPMCKERKN INTYESSHSK NRLTRLLPCS
0401: AIKQCQNYSR SLHINCGGPD VTIENSRGRF LYEGDNYGLT GSATNYYRKN WGYSNTGDFM DDAITEDTYT VSSESAVSAK YPDLYQNARR SPLSLAYYAF
0501: CFENGSYNVK LHFAEIQFSD VEPYTKLAKR VFNIYIQGKL IWEDFSIREE ANGTHKEVIR EVNTTVTDNT LEIRLYWAGK GTMIIPQRGY YGSLISAVSV
0601: CPSSESECGV PVQFLPVKKD HKPTKYPLIL GLTLSLAFLL LAAFCWRKCV SNANAAERGS FSLRQLKVAT NDFDPLNKIG EGGFGSVYKG RLPDGTLIAV
0701: KKLSSKSHQG NKEFVNEIGM IACLQHPNLV KLYGCCVEKN QLLLVYEYLE NNCLSDALFG RSCLKLEWGT RHKICLGIAR GLAFLHEDSA VKIIHRDIKG
0801: TNVLLDKDLN SKISDFGLAR LHEDNQSHIT TRVAGTIGYM APEYAMRGHL TEKADVYSFG VVAMEIVSGK SNAKYTPDDE CCVGLLDWAF VLQKKGDIAE
0901: ILDPRLEGMF DVMEAERMIK VSLLCANKSS TLRPNMSQVV KMLEGETEIE QIISDPGVYS DNLHFKPSSL SSDYILSIPS SSESAYDLYP LSPESIVFTI
1001: Q
0101: KHFVLQKFNL PGRLPPMLYK FRHLESIDLY NNYLYGSIPM EWASLPYLKS ISVCANRLSG DIPKGLGKFI NLTLLVLEAN QFSGTIPKEL GNLVNLQGLG
0201: LSSNQLVGGL PKTLAKLTKL TNLHLSDNRL NGSIPEFIGK LPKLQRLELY ASGLRGPIPD SIFHLENLID VRISDTVAGL GHVPQITSTS LKYLVLRNIN
0301: LSGPIPTSIW DLPSLMTLDL SFNRLTGEIP AYATAPKYTY LAGNMLSGKV ETGAFLTAST NIDLSYNNFT WSPMCKERKN INTYESSHSK NRLTRLLPCS
0401: AIKQCQNYSR SLHINCGGPD VTIENSRGRF LYEGDNYGLT GSATNYYRKN WGYSNTGDFM DDAITEDTYT VSSESAVSAK YPDLYQNARR SPLSLAYYAF
0501: CFENGSYNVK LHFAEIQFSD VEPYTKLAKR VFNIYIQGKL IWEDFSIREE ANGTHKEVIR EVNTTVTDNT LEIRLYWAGK GTMIIPQRGY YGSLISAVSV
0601: CPSSESECGV PVQFLPVKKD HKPTKYPLIL GLTLSLAFLL LAAFCWRKCV SNANAAERGS FSLRQLKVAT NDFDPLNKIG EGGFGSVYKG RLPDGTLIAV
0701: KKLSSKSHQG NKEFVNEIGM IACLQHPNLV KLYGCCVEKN QLLLVYEYLE NNCLSDALFG RSCLKLEWGT RHKICLGIAR GLAFLHEDSA VKIIHRDIKG
0801: TNVLLDKDLN SKISDFGLAR LHEDNQSHIT TRVAGTIGYM APEYAMRGHL TEKADVYSFG VVAMEIVSGK SNAKYTPDDE CCVGLLDWAF VLQKKGDIAE
0901: ILDPRLEGMF DVMEAERMIK VSLLCANKSS TLRPNMSQVV KMLEGETEIE QIISDPGVYS DNLHFKPSSL SSDYILSIPS SSESAYDLYP LSPESIVFTI
1001: Q
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.