Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018693.1-P | Field mustard | plasma membrane | 84.8 | 86.5 |
| CDX93632 | Canola | plasma membrane | 85.69 | 86.36 |
| CDX95138 | Canola | plasma membrane | 85.49 | 86.17 |
| HORVU5Hr1G056600.2 | Barley | cytosol | 6.37 | 75.58 |
| GSMUA_Achr4P15520_001 | Banana | cytosol | 35.1 | 64.27 |
| VIT_12s0028g01350.t01 | Wine grape | plasma membrane | 63.53 | 64.09 |
| Zm00001d020172_P001 | Maize | cytosol, plasma membrane, plastid | 34.22 | 62.66 |
| KRH73704 | Soybean | plasma membrane | 61.86 | 61.56 |
| KRH14451 | Soybean | plasma membrane | 61.18 | 60.76 |
| PGSC0003DMT400044535 | Potato | plasma membrane | 60.29 | 59.88 |
| Solyc07g055810.2.1 | Tomato | plasma membrane | 60.2 | 59.79 |
| KXG35455 | Sorghum | plasma membrane | 56.08 | 55.37 |
| TraesCS5A01G186500.1 | Wheat | plasma membrane | 54.8 | 55.29 |
| TraesCS5B01G184900.1 | Wheat | plasma membrane | 54.9 | 55.28 |
| HORVU5Hr1G056670.6 | Barley | plasma membrane | 54.8 | 55.07 |
| TraesCS5D01G191800.1 | Wheat | plasma membrane | 54.61 | 54.99 |
| KXG35457 | Sorghum | plasma membrane | 54.22 | 53.64 |
| AT1G53430.1 | Thale cress | plasma membrane | 51.08 | 50.19 |
| Os09t0345300-01 | Rice | plasma membrane | 33.82 | 48.87 |
| AT1G53440.1 | Thale cress | plasma membrane | 49.51 | 48.79 |
| AT3G14840.2 | Thale cress | plasma membrane | 48.24 | 48.24 |
| AT1G53420.1 | Thale cress | plasma membrane | 43.53 | 46.59 |
| AT1G29720.1 | Thale cress | plasma membrane | 45.39 | 45.44 |
| AT1G29750.2 | Thale cress | plasma membrane | 45.1 | 45.05 |
| AT1G29730.2 | Thale cress | plasma membrane | 44.12 | 44.95 |
| AT1G29740.1 | Thale cress | plasma membrane | 44.61 | 42.21 |
| AT1G56130.2 | Thale cress | plasma membrane | 38.63 | 38.18 |
| AT1G56140.1 | Thale cress | plasma membrane | 38.63 | 38.14 |
| AT1G56120.1 | Thale cress | cytosol | 37.94 | 36.96 |
| AT1G56145.2 | Thale cress | plasma membrane | 37.16 | 36.48 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.8.2 | Gene3D:2.60.120.430 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EntrezGene:837278 |
| ProteinID:AEE28156.1 | ArrayExpress:AT1G07650 | EnsemblPlantsGene:AT1G07650 | RefSeq:AT1G07650 | TAIR:AT1G07650 | RefSeq:AT1G07650-TAIR-G |
| EnsemblPlants:AT1G07650.2 | TAIR:AT1G07650.2 | UniProt:F4HSE1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | InterPro:Malectin |
| RefSeq:NP_001184930.1 | PFAM:PF07714 | PFAM:PF11721 | PFAM:PF13516 | PFAM:PF13855 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00019 |
| ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27006 | PANTHER:PTHR27006:SF37 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom |
| InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001E92B3C | SEG:seg | : |
Description
Leucine-rich repeat transmembrane protein kinase [Source:UniProtKB/TrEMBL;Acc:F4HSE1]
Coordinates
chr1:-:2359565..2366609
Molecular Weight (calculated)
113505.0 Da
IEP (calculated)
8.889
GRAVY (calculated)
-0.192
Length
1020 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIYLHRIYFI IVLFTLIFHG RLGFSDNNKL HEAEVRALKE IGKKLGKKDW DFNKDPCSGE GTWIVTTYTT KGFESNITCD CSFLPQNSSC HVIRIGNLVG
0101: RALKSQNLTG IVPPEFSKLR HLKVLDLSRN SLTGSIPKEW ASMRLEDLSF MGNRLSGPFP KVLTRLTMLR NLSLEGNQFS GPIPPDIGQL VHLEKLHLPS
0201: NAFTGPLTEK LGLLKNLTDM RISDNNFTGP IPDFISNWTR ILKLQMHGCG LDGPIPSSIS SLTSLTDLRI SDLGGKPSSF PPLKNLESIK TLILRKCKII
0301: GPIPKYIGDL KKLKTLDLSF NLLSGEIPSS FENMKKADFI YLTGNKLTGG VPNYFVERNK NVDVSFNNFT DESSIPSHDC NRVTSNLVES FALGNKSHKG
0401: STCFLQRMPC VHPKRYHLYK LYINCGGGEV KVDKEITYQA DDEPKGASMY VLGANKRWAL SSTGNFMDND DDADEYTVQN TSRLSVNASS PSFGLYRTAR
0501: VSPLSLTYYG ICLGNGNYTV NLHFAEIIFT DDNTLYSLGK RLFDIYVQDQ LVIKNFNIQE AARGSGKPII KSFLVNVTDH TLKIGLRWAG KGTTGIPIRG
0601: VYGPMISAIS VEPNFKPPVY YDTKDIILKV GVPVAAATLL LFIIVGVFWK KRRDKNDIDK ELRGLDLQTG TFTLRQIKAA TDNFDVTRKI GEGGFGSVYK
0701: GELSEGKLIA VKQLSAKSRQ GNREFVNEIG MISALQHPNL VKLYGCCVEG NQLILVYEYL ENNCLSRALF GKDESSRLKL DWSTRKKIFL GIAKGLTFLH
0801: EESRIKIVHR DIKASNVLLD KDLNAKISDF GLAKLNDDGN THISTRIAGT IGYMAPEYAM RGYLTEKADV YSFGVVALEI VSGKSNTNFR PTEDFVYLLD
0901: WAYVLQERGS LLELVDPTLA SDYSEEEAML MLNVALMCTN ASPTLRPTMS QVVSLIEGKT AMQELLSDPS FSTVNPKLKA LRNHFWQNEL SRSLSFSTSG
1001: PRTASANSLV DAEEKTGLLD
0101: RALKSQNLTG IVPPEFSKLR HLKVLDLSRN SLTGSIPKEW ASMRLEDLSF MGNRLSGPFP KVLTRLTMLR NLSLEGNQFS GPIPPDIGQL VHLEKLHLPS
0201: NAFTGPLTEK LGLLKNLTDM RISDNNFTGP IPDFISNWTR ILKLQMHGCG LDGPIPSSIS SLTSLTDLRI SDLGGKPSSF PPLKNLESIK TLILRKCKII
0301: GPIPKYIGDL KKLKTLDLSF NLLSGEIPSS FENMKKADFI YLTGNKLTGG VPNYFVERNK NVDVSFNNFT DESSIPSHDC NRVTSNLVES FALGNKSHKG
0401: STCFLQRMPC VHPKRYHLYK LYINCGGGEV KVDKEITYQA DDEPKGASMY VLGANKRWAL SSTGNFMDND DDADEYTVQN TSRLSVNASS PSFGLYRTAR
0501: VSPLSLTYYG ICLGNGNYTV NLHFAEIIFT DDNTLYSLGK RLFDIYVQDQ LVIKNFNIQE AARGSGKPII KSFLVNVTDH TLKIGLRWAG KGTTGIPIRG
0601: VYGPMISAIS VEPNFKPPVY YDTKDIILKV GVPVAAATLL LFIIVGVFWK KRRDKNDIDK ELRGLDLQTG TFTLRQIKAA TDNFDVTRKI GEGGFGSVYK
0701: GELSEGKLIA VKQLSAKSRQ GNREFVNEIG MISALQHPNL VKLYGCCVEG NQLILVYEYL ENNCLSRALF GKDESSRLKL DWSTRKKIFL GIAKGLTFLH
0801: EESRIKIVHR DIKASNVLLD KDLNAKISDF GLAKLNDDGN THISTRIAGT IGYMAPEYAM RGYLTEKADV YSFGVVALEI VSGKSNTNFR PTEDFVYLLD
0901: WAYVLQERGS LLELVDPTLA SDYSEEEAML MLNVALMCTN ASPTLRPTMS QVVSLIEGKT AMQELLSDPS FSTVNPKLKA LRNHFWQNEL SRSLSFSTSG
1001: PRTASANSLV DAEEKTGLLD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.